Halomonas sp. MCCC 1A13316: HNO52_02210
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Entry
HNO52_02210 CDS
T10913
Name
(GenBank) phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
hamc Halomonas sp. MCCC 1A13316
Brite
KEGG Orthology (KO) [BR:
hamc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hamc03019
]
HNO52_02210
Messenger RNA biogenesis [BR:
hamc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HNO52_02210
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Paralog
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GFIT
Motif
Pfam:
TraI_2
HD
HDOD
Motif
Other DBs
NCBI-ProteinID:
QOR37456
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All DBs
Position
complement(477127..478065)
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AA seq
312 aa
AA seq
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MKKSNPPTCTENFTGIFRLTGRIVDFDSHGTPYLRLRLSHFEGDHIAGLDVDHVHVPEDI
GYLDLIKVAGIRCPKNPLNLDVRLIDIHKACPAEANAQPVLNSMPRVYCPVPSSLDMLVG
SVRSLSSPHLKHFIRRVIERKDRLESFLNAPASRSHHHAYPGGLLEHSVDVARNVVAMIQ
LNEPNMPRLLQELGFVAGLLHDIGKTYTYDSKGKPNLAWRLCDHHALTLEACAFGLAYLD
RHEPELAITLRHIWTSASPGARYGTQPANTLARYVRDADGQSAMAHRQKSVFQGIRHGLV
KKGKELFWSPAV
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagagtaatccccctacttgcactgaaaattttactggcattttccgcttgacg
ggacgcatcgtcgatttcgacagccacggtaccccctatctcaggcttcggctcagccac
ttcgagggtgaccatatcgccggcttggacgttgatcatgttcatgttccggaagatatc
ggatatcttgatctaatcaaggtagctggcattcgctgccccaagaacccgctcaatctt
gatgtgcgcctcattgatattcacaaggcctgccctgccgaggccaacgctcagccagta
cttaatagcatgccacgcgtctactgcccggtgccgtcctctcttgatatgctggtaggg
tcggtgcgctctttgagttcgcctcatctcaaacatttcatcaggcgggtaatcgagcgc
aaagatcgccttgaatcctttctcaacgcgcctgctagtcgatctcatcaccatgcgtat
cccggcggtctcttggagcactctgtcgatgtcgccagaaacgtcgtggcgatgatccaa
ctcaacgagcccaacatgcctcgactgcttcaggagcttggttttgtcgccgggttgcta
cacgatatcggaaagacgtacacctacgactcgaaaggcaagcccaatttggcatggcgt
ctctgcgatcaccatgccctgacgctggaagcgtgtgcctttggcctggcttatcttgat
cgtcacgaaccagaactggccatcactctcaggcatatctggaccagcgcctcccctgga
gcacgctatggcacccagccagccaacacgttggcgcgttacgtgcgggatgccgatgga
caaagtgccatggcccatcggcaaaaatcagttttccagggtattcgccatggactggtc
aagaagggaaaagaactcttctggtcgccagccgtttga
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