Billgrantia diversa: HNO52_02670
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Entry
HNO52_02670 CDS
T10913
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
hamc Billgrantia diversa
Pathway
hamc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hamc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HNO52_02670 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hamc03021
]
HNO52_02670 (rho)
03019 Messenger RNA biogenesis [BR:
hamc03019
]
HNO52_02670 (rho)
Transcription machinery [BR:
hamc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
HNO52_02670 (rho)
Messenger RNA biogenesis [BR:
hamc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HNO52_02670 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
NACHT
AAA_22
Fungal_virus_P2_C
AAA_25
AAA
Motif
Other DBs
NCBI-ProteinID:
QOR37542
UniProt:
A0ACN3VMH8
LinkDB
All DBs
Position
572900..574159
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKQKSVPDLLEIAREMGIDNLARSRKQDIIFAILKKHAKSGEDIYGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRKGDSISGKIRPPKEGERYFALLKVSQIN
FDKPENAKHKILFENLTPLFPQERLRMEIGNGSTEDLTARIIDLTAPIGKGQRGLIVSPP
KAGKTLMLQNIATSITRNNPECHLIVLLIDERPEEVTEMSRTVRGEVVASTFDEPPARHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVVPSSGKVLTGGVDAHALEKPKRF
FGAARNIEEGGSLTIIATALVDTGSKMDEVIFEEFKGTGNMEAHLDRKLAERRVYPALNI
RRSGTRREDLIASEDEMQRMWILRKLLNPMDDTAATEFLIDRLKDTKTNLEFFEAMKRR
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaactcaagcaaaaatccgtgccggaccttctggagatcgcccgtgaa
atgggcatcgacaacctggcccgctcgcgcaagcaggacatcatcttcgccatcctcaag
aagcacgccaagagcggcgaggacatctacggcgatggtgtactggaaatcctccaggac
ggcttcggcttcctgcgcagtgccgacagctcctacctggccggccccgacgacatctac
gtctcaccgtcgcagatacgtcgcttcaatctgcgcaagggcgattcgatttccggcaag
attcgtccgccgaaggaaggggagcgctacttcgcgctgctcaaggtcagccagatcaac
ttcgacaagccggaaaacgccaagcacaagatcctgttcgagaacctcacgccgctgttc
ccccaggagcggcttcgcatggagatcggcaacggttccaccgaggatctcaccgcacgc
atcatcgatctcaccgcacccatcggcaagggccagcgcggcctgatcgtctcgccgccc
aaggcgggcaagacgctgatgctgcagaacatcgccacctcgatcacgcgcaacaatccc
gagtgccacttgatcgtgctgttgatcgacgaacgcccggaagaagtgaccgagatgtcg
cgcaccgtgcgcggcgaggtggtcgcctcgaccttcgacgagccgccggcacgccacgtg
caggtcgccgagatggtcatcgagaaggccaagcgcctggtcgagcacaagaaggacgtg
gtgatcctgctcgactccattacccgcctggcacgcgcctacaacaccgtggtgccgagc
tccggcaaggttctcaccggcggtgtcgacgcccacgccctggaaaagcccaagcgcttc
ttcggtgccgcacgtaacattgaggaaggcggcagcctgaccatcatcgccaccgcgctg
gtcgataccggctcgaagatggacgaggtgatcttcgaggagttcaagggcaccggcaac
atggaagcccacctggaccgcaagctcgccgagcgacgcgtctatccggccctcaacatt
cgccgttcgggcacccgtcgcgaggacctgatcgcctccgaggacgagatgcagcgcatg
tggatcctgcgcaagctgctcaacccgatggacgacaccgcggcgacggaattcctcatc
gaccgcttgaaagataccaagacgaacctggaattcttcgaggcaatgaagcgccgctag
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