Halomonas sp. MCCC 1A13316: HNO52_03465
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Entry
HNO52_03465 CDS
T10913
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
hamc Halomonas sp. MCCC 1A13316
Brite
KEGG Orthology (KO) [BR:
hamc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hamc03009
]
HNO52_03465 (dbpA)
Enzymes [BR:
hamc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
HNO52_03465 (dbpA)
Ribosome biogenesis [BR:
hamc03009
]
Prokaryotic type
rRNA helicases
HNO52_03465 (dbpA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-ProteinID:
QOR37682
UniProt:
A0A7M1Q6G6
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All DBs
Position
746913..748313
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AA seq
466 aa
AA seq
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MSDSSHDGAFASLPLAPELLANIDSLGYRAMTPIQAESLPLVLAGRDVIAQAKTGSGKTA
AFGLGLLSRLLVARFCVQALVLCPTRELADQVAGEIRRLARTLPNVKVLTLCGGTPLGPQ
LASLAHGAHVIVGTPGRVEEHLRKGSLDLASLETLVLDEADRMLDMGFQPAMEAIVAETP
ACRQTLLFSATYSDEIRRIADGLMRAPAEVAVAETHDETTIRQRIYRVADEAERFSALRG
LLLQHRPRASVVFCNTRRETQEVADALCEAGFSALALHGDLEQRDRDRILILFANHSASI
LVATDVAARGLDIEALDAVFNYQIARELEVHVHRVGRTGRAGSSGIACTLVAEREAYRLE
RLAEFLGEPLEEAPLPPRNVLTREPFLPEMATLQLDGGKKQKVRPGDILGALTGDGGIEG
AQVGKIKVLERSAYVAVKREVAKAALAQLGTGKLKGRSFRARRVSR
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgattcttcccatgacggggcctttgcctcgctgccgctggcgccagagttactg
gccaatatcgattcgctcggctaccgcgccatgacaccgattcaggccgagagcctgccc
ttggtgctggcgggccgtgacgtgatcgcgcaggcgaagaccggctcgggcaagaccgct
gcgttcggcctgggattgctgtcgcgtctgctcgtcgcgcgcttctgcgtgcaggcgctg
gtgctctgtcccacccgcgagctggccgaccaggtggccggcgaaatccggcggcttgcg
cgcacattacccaacgtcaaggtactgaccctgtgcggcgggactcccctgggcccgcag
ctcgcttcgctggcgcatggtgcgcatgtaatagtgggtactccgggcagggtggaggag
cacctgcgcaagggctcgctcgacctcgcttcgctcgagacgctggtgcttgacgaggcg
gaccgcatgctcgacatgggcttccagcctgcgatggaggcgatcgtcgccgagacgccg
gcctgccgccagaccctgctattcagcgcgacctacagcgacgaaatccggcgcattgcc
gacgggctgatgcgtgccccggccgaggtggcggtggccgaaacccatgacgagaccacc
atacgccagcgtatctatcgagtggcagacgaagcggagcgcttctccgccctgcgtggg
ctactgttgcagcatcggccgcgcgcaagcgtggtgttctgcaacacacggcgcgagacg
caggaggttgccgatgccctctgtgaagcgggcttcagtgccctggcgctgcatggcgac
ctggagcagcgtgaccgcgaccgcatcttgatcctgttcgccaatcacagcgcttccatc
ctggtcgcgaccgacgtagcggcacgcggactggatatcgaagcactggatgcggtattc
aactatcagatcgctcgtgaactcgaggttcatgtgcatcgtgtcgggcgtaccggccgt
gccggcagctccggcatcgcctgcaccttggtcgccgagcgcgaggcctatcgcctcgag
cggctggccgagtttcttggcgagccgctcgaggaggcgccgttgccgccacgcaatgtg
ctgacgcgggagcctttcctgccggagatggcgacgttgcagctcgacggcggcaagaag
cagaaggtgcgccccggggatattctcggcgcactgaccggcgatggaggcatcgaaggt
gcccaggtcggcaagatcaaggtgctggagcgcagcgcctacgtggccgtgaagcgcgag
gtcgccaaggcagcgctcgcccagctcggcacgggaaaactcaaggggcgttcgttccgc
gcccggcgtgtcagccgctga
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