Halomonas sp. MCCC 1A13316: HNO52_04110
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Entry
HNO52_04110 CDS
T10913
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
hamc Halomonas sp. MCCC 1A13316
Brite
KEGG Orthology (KO) [BR:
hamc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hamc03400
]
HNO52_04110
DNA repair and recombination proteins [BR:
hamc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
HNO52_04110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_22
AAA_16
AAA_30
SLFN-g3_helicase
Flavi_DEAD
MgtE_N
DZR
DUF7577
AAA
zf-tcix
Motif
Other DBs
NCBI-ProteinID:
QOR37785
UniProt:
A0A7M1Q842
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Position
870464..872281
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AA seq
605 aa
AA seq
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MSTSRCPSLRSYQQEAVRRVVTHFRASDEPAVVVLPTGSGKSLVIAELARLARGRVLVLA
HVRELVEQNHAKYLAYGLEADIYSAGLGRKESARQVVFGSVQSVVRNLERFDDSNFTLLV
IDECHRVSPDKDAGYRRVIERLRQANPRLKVLGLTATPYRLGQGFIYYRHHHGMVRGDDD
CFFRDCVFEQPLRLMVKQGYLAEPRRVDAAVERYDFASLRPAASGLYREEELNRVVAGSR
ATPGIVAEIIERARQRQGVMLFAATVAHAEEILGYLPPDEAALITGETPSRERERLIAAF
KGQELRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDY
AGNPWDLYAPEVGSPRPASDTEPVQVECPACGHANLFWGRRDGDIVIEHFGRRCQGLIND
PGPSSGEGSGQRGAASGACKQYQCEFRYRFKVCGECGAENDIAARRCHGCETLLVDADDK
LKEALRLSNAKVLRVAGMQLEATDNGRGLPRLKVTYHDEDGETLAEWFALETAAQRAAFA
AVFLRDHLRAPGARWRPLSAEEVVVERRRLRHPDFVVGRKVGRHWQVREKLFDYTGRYRR
AVAAD
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgtccacctctcgctgcccttcgctgcgttcttaccagcaggaggccgtgcgtcgcgtg
gtgacacatttccgcgccagtgacgagccggcggtggtggtgttgcccaccggtagcggc
aagtcgctggtgattgccgagctggcgcgcctcgcacgcggacgggtgctggtgctcgct
catgtgcgcgaactggtggaacagaaccacgccaagtacctggcctatggcctcgaggcg
gatatctacagtgccgggctggggcgcaaggagagtgcgcgccaggtggtgttcggctcg
gtacagtcggtggtgcgcaacctggagcgcttcgacgacagtaatttcaccctgctggta
atcgacgagtgtcatcgggtctcgccggacaaggacgccggttaccgccgcgtgatcgag
cgcctgcgccaggccaacccgcggctcaaggtgctggggctgaccgccacgccttatcgc
ctggggcaggggttcatctactaccggcatcatcacggcatggtacgcggcgacgacgac
tgcttctttcgcgactgcgtcttcgagcagccgctgcgattaatggtcaagcagggctac
ctggccgagccacggcgcgtggatgctgccgtcgagcgctacgacttcgcctcgcttcgc
ccggccgccagtgggctttaccgcgaagaggaactcaaccgggtggtggcgggcagccgc
gctacgccgggcatcgtcgccgagatcatcgagcgcgcccgccagcgccagggcgtgatg
ctcttcgccgccacggtggctcacgccgaggagatcctcggctacctgccccccgatgag
gcggcactgatcaccggcgagacgccatcacgcgagcgcgaacgcctcatagccgctttc
aaggggcaggagctcaggtacctggtcaacgtggcggtgctcaccaccggcttcgatgcg
ccccacgtcgacctgatcgcgatcctgcggcccaccgagtcggtgagtctctaccaacag
atcgtggggcgtggcctgcgactcgcaccgggcaagaccgactgcctgatcctcgattac
gccggcaatccttgggacctctacgcaccggaggtgggcagccccaggccggcctcggac
accgagccggtgcaggtcgaatgccccgcttgcggccacgccaacctgttctgggggcgg
cgcgacggcgacatcgtcatcgagcacttcggcaggcgctgccaagggctcatcaacgat
cctggcccttccagcggggagggcagtggccaacggggcgcggcttcgggcgcctgtaaa
cagtatcagtgtgaatttcgctatcgcttcaaggtttgcggcgagtgcggcgccgaaaac
gacatcgccgcgcggcgctgccacggctgcgagaccctgctggtcgacgccgacgacaag
ctcaaggaagcgctgcgcctcagcaatgccaaagtgctgcgagtggccggaatgcaactc
gaggccaccgacaacgggcgtggcctgccgcgcctcaaggtcacctaccacgacgaggat
ggggagacgctggccgagtggttcgccttggagaccgcggcccagcgtgccgctttcgct
gctgtcttcttgcgcgatcacctacgcgcgccgggagcacgctggcggccgttgagcgcg
gaggaagtcgtcgtcgagcgtcggcgtctgcgccaccccgacttcgtggtggggcgcaag
gtgggccgacattggcaggtgcgagagaagctgttcgactacaccgggcgctatcgacgt
gctgttgccgccgattga
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