KEGG   Halomonas sp. MCCC 1A13316: HNO52_04110
Entry
HNO52_04110       CDS       T10913                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K19789  DNA repair protein RadD
Organism
hamc  Halomonas sp. MCCC 1A13316
Brite
KEGG Orthology (KO) [BR:hamc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hamc03400]
    HNO52_04110
DNA repair and recombination proteins [BR:hamc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     HNO52_04110
SSDB
Motif
Pfam: ResIII DEAD Helicase_C SWI2_SNF2 AAA_22 AAA_16 AAA_30 SLFN-g3_helicase Flavi_DEAD MgtE_N DZR DUF7577 AAA zf-tcix
Other DBs
NCBI-ProteinID: QOR37785
UniProt: A0A7M1Q842
LinkDB
Position
870464..872281
AA seq 605 aa
MSTSRCPSLRSYQQEAVRRVVTHFRASDEPAVVVLPTGSGKSLVIAELARLARGRVLVLA
HVRELVEQNHAKYLAYGLEADIYSAGLGRKESARQVVFGSVQSVVRNLERFDDSNFTLLV
IDECHRVSPDKDAGYRRVIERLRQANPRLKVLGLTATPYRLGQGFIYYRHHHGMVRGDDD
CFFRDCVFEQPLRLMVKQGYLAEPRRVDAAVERYDFASLRPAASGLYREEELNRVVAGSR
ATPGIVAEIIERARQRQGVMLFAATVAHAEEILGYLPPDEAALITGETPSRERERLIAAF
KGQELRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDY
AGNPWDLYAPEVGSPRPASDTEPVQVECPACGHANLFWGRRDGDIVIEHFGRRCQGLIND
PGPSSGEGSGQRGAASGACKQYQCEFRYRFKVCGECGAENDIAARRCHGCETLLVDADDK
LKEALRLSNAKVLRVAGMQLEATDNGRGLPRLKVTYHDEDGETLAEWFALETAAQRAAFA
AVFLRDHLRAPGARWRPLSAEEVVVERRRLRHPDFVVGRKVGRHWQVREKLFDYTGRYRR
AVAAD
NT seq 1818 nt   +upstreamnt  +downstreamnt
atgtccacctctcgctgcccttcgctgcgttcttaccagcaggaggccgtgcgtcgcgtg
gtgacacatttccgcgccagtgacgagccggcggtggtggtgttgcccaccggtagcggc
aagtcgctggtgattgccgagctggcgcgcctcgcacgcggacgggtgctggtgctcgct
catgtgcgcgaactggtggaacagaaccacgccaagtacctggcctatggcctcgaggcg
gatatctacagtgccgggctggggcgcaaggagagtgcgcgccaggtggtgttcggctcg
gtacagtcggtggtgcgcaacctggagcgcttcgacgacagtaatttcaccctgctggta
atcgacgagtgtcatcgggtctcgccggacaaggacgccggttaccgccgcgtgatcgag
cgcctgcgccaggccaacccgcggctcaaggtgctggggctgaccgccacgccttatcgc
ctggggcaggggttcatctactaccggcatcatcacggcatggtacgcggcgacgacgac
tgcttctttcgcgactgcgtcttcgagcagccgctgcgattaatggtcaagcagggctac
ctggccgagccacggcgcgtggatgctgccgtcgagcgctacgacttcgcctcgcttcgc
ccggccgccagtgggctttaccgcgaagaggaactcaaccgggtggtggcgggcagccgc
gctacgccgggcatcgtcgccgagatcatcgagcgcgcccgccagcgccagggcgtgatg
ctcttcgccgccacggtggctcacgccgaggagatcctcggctacctgccccccgatgag
gcggcactgatcaccggcgagacgccatcacgcgagcgcgaacgcctcatagccgctttc
aaggggcaggagctcaggtacctggtcaacgtggcggtgctcaccaccggcttcgatgcg
ccccacgtcgacctgatcgcgatcctgcggcccaccgagtcggtgagtctctaccaacag
atcgtggggcgtggcctgcgactcgcaccgggcaagaccgactgcctgatcctcgattac
gccggcaatccttgggacctctacgcaccggaggtgggcagccccaggccggcctcggac
accgagccggtgcaggtcgaatgccccgcttgcggccacgccaacctgttctgggggcgg
cgcgacggcgacatcgtcatcgagcacttcggcaggcgctgccaagggctcatcaacgat
cctggcccttccagcggggagggcagtggccaacggggcgcggcttcgggcgcctgtaaa
cagtatcagtgtgaatttcgctatcgcttcaaggtttgcggcgagtgcggcgccgaaaac
gacatcgccgcgcggcgctgccacggctgcgagaccctgctggtcgacgccgacgacaag
ctcaaggaagcgctgcgcctcagcaatgccaaagtgctgcgagtggccggaatgcaactc
gaggccaccgacaacgggcgtggcctgccgcgcctcaaggtcacctaccacgacgaggat
ggggagacgctggccgagtggttcgccttggagaccgcggcccagcgtgccgctttcgct
gctgtcttcttgcgcgatcacctacgcgcgccgggagcacgctggcggccgttgagcgcg
gaggaagtcgtcgtcgagcgtcggcgtctgcgccaccccgacttcgtggtggggcgcaag
gtgggccgacattggcaggtgcgagagaagctgttcgactacaccgggcgctatcgacgt
gctgttgccgccgattga

DBGET integrated database retrieval system