Halomonas sp. MCCC 1A13316: HNO52_05610
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Entry
HNO52_05610 CDS
T10913
Name
(GenBank) extracellular solute-binding protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
hamc Halomonas sp. MCCC 1A13316
Pathway
hamc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hamc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HNO52_05610
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hamc02000
]
HNO52_05610
Transporters [BR:
hamc02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
HNO52_05610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
TAT_signal
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
QOR38043
LinkDB
All DBs
Position
1190866..1191981
Genome browser
AA seq
371 aa
AA seq
DB search
MSFTRRRFLKGTLAAGAAATVPSFYINKVLAQEQTLRIYAWAGYFSDEMLADFTEKTGIR
ATFTPYGTNDELMNSLRATDGTGFDVIMPTVDRVPGYLDYDLVQPLDESRINWAGALDSA
IEGSEVGGVVDGKRFFAPSDWGTEAITWNRRDAKIDRANLSYAELWNPEHGQGVTVRGHS
ALVGIGLWLEREGRLPHPLLDSYRSEEAMRANFDVILEEAVKHKQMLVQFWDTENDAQAA
FRTNGAIIGQTWDSTAFRLQQEGEDIAYGAPKEGALAWMEGFVIPKNAQNPDAVYELINW
YYTPEAGAQFVKATGYNSTSKGATELLPDETRQFFTDSYTEQDLANLWWWPIQEPWYVAL
RNEYQDRYLSA
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcacacgtcgccgtttcctcaaaggcaccctggctgccggcgctgctgccacc
gtgccgtcgttctatatcaacaaggtattggcccaggagcagaccctgcgtatttacgct
tgggcgggctatttctccgacgagatgctggctgacttcactgagaagactggcatccgc
gcgaccttcactccctacggcaccaacgacgagctgatgaactcgctgcgggccaccgac
ggcaccggcttcgacgtgatcatgcccaccgtggaccgggtgccgggttacctggactac
gacctggtacagccgttggacgaatcgcgcatcaactgggccggcgcgctcgacagcgcc
atcgagggctccgaagtgggcggcgtggtcgatggcaagcgcttctttgcgcccagcgat
tggggcaccgaggcgatcacctggaaccgccgcgacgccaagatcgaccgtgccaacctc
agctatgccgaactgtggaaccccgaacacggccagggcgtgaccgtgcgtggccactcg
gcactggtaggcatcgggctgtggctggagcgcgagggcaggctgccgcacccgctgctc
gattcctaccgcagtgaggaggccatgcgcgccaacttcgacgtcatcctcgaagaggcg
gtcaagcacaagcagatgttggtgcagttctgggataccgagaacgacgcccaggcggcc
ttccgcaccaacggcgccatcatcggccagacctgggactccaccgccttccgcctgcag
caggaaggcgaggacatcgcctacggcgcgccgaaggagggagcgctggcatggatggaa
ggcttcgtgattcccaagaatgcccagaacccggatgccgtctacgagctgatcaactgg
tactacacgccggaggcgggcgcgcagttcgtcaaggcgaccggctacaactcgacctcc
aagggtgccaccgaactgctgcccgacgagacgcggcaattcttcaccgattcctatacc
gagcaggacctcgccaatctttggtggtggccgatccaggagccgtggtacgtggcgctg
cgcaatgagtaccaggatcgctacctgagcgcttag
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integrated database retrieval system
