Halomonas sp. MCCC 1A13316: HNO52_07865
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Entry
HNO52_07865 CDS
T10913
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hamc Halomonas sp. MCCC 1A13316
Pathway
hamc03420
Nucleotide excision repair
hamc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hamc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HNO52_07865
03430 Mismatch repair
HNO52_07865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hamc03400
]
HNO52_07865
Enzymes [BR:
hamc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HNO52_07865
DNA repair and recombination proteins [BR:
hamc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HNO52_07865
MMR (mismatch excision repair)
Other MMR factors
HNO52_07865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QOR38433
UniProt:
A0A7M1Q9J8
LinkDB
All DBs
Position
1684615..1686846
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AA seq
743 aa
AA seq
DB search
MRLTVEQRAVVEHDAGHARVAAVAGAGKTTTLVARVLHLLARGVPANRVLVLMFNRSARD
DFQRRLVEMAPVGQRLPDVRTFHSLGHRLTASLTRWGALAPRRLIAADWQVERLLRQATL
DVLEDGEQREMALEADTLEALALFCGLVKAEMMPAGTLLERLDYDEGTEHFAEAFERLEA
LLLEHGLMTYSDLLYRPLRALEADAGLVRRVQGFLDQAIVDEYQDINQAQLRLLALLAGR
DADVMAVGDANQCIYEWRGAHPDTMREHFTATFGAATDYPLSTTFRHGHSLALLANHAIA
ANRRRPDQLCLAAPGNPRTELTVEQGRAALLATLDSWQHVGRALSEACLLVRSWALSVPV
QLQLLQAGIPFRLSREDRFVFRLPLVQALAGYLRLARTPALLLDPAHLLRMFEQPTPFVA
RERLVALTQRLAQTQHYPERDDPLLAGLKPMQRRNLKRRWTLLCELPRLGRWEPARLLTH
VIDSLDAEKVLKRAAARREKGEEDVRLLDVLVEQAGETRDIDAFIELLERPVENHADGLL
ITTVHGAKGLEWPLVMVAGVNEEDFPHYSRDNPLSPERLEEERRLFYVAVTRACERLLLL
HDGGDHRPSRFLAETAWEDCRQVAARLSDPAQGDASLTVASPELVSRYLAAVDREGVKLT
QRAPAVAEPGATYSTQPYRPGQWLRHAVFGEGEVVVVEGDPADPVIEVNFKQAGRRRLLA
CRAPIELLASEGARTVPVQGERA
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
gtgaggctgaccgtcgagcagcgtgccgttgtcgagcacgatgccggtcatgcccgggta
gccgccgtggcgggtgccggcaagactaccaccctggttgcgcgcgtattgcacctgctc
gcacgcggggtcccggcgaaccgggtcctggtgttgatgttcaaccgctcggcgcgcgac
gacttccagcgtcggctcgtcgagatggcgccagtgggccagcgcctgccggacgtgcgt
acctttcattcgctgggacatcgtctgaccgcgagcctcacccgctggggcgcactggca
ccgcgccgactgatcgccgccgattggcaggtggagcggctgctgcgccaggctaccctt
gacgtactggaggatggcgaacagcgtgagatggctcttgaggccgataccctggaggcg
ctggcgcttttctgcggcctggtgaaggccgaaatgatgccggcgggcaccctcctggag
cggctcgattacgacgaaggcaccgagcactttgccgaggccttcgagcgcctcgaggcg
ctgctcttagagcacggtctcatgacctattccgacctgctctatcggcccctgcgcgcg
ctggaggcggatgccggcttggtacgacgggtccagggctttctcgaccaggcgatcgtc
gacgagtaccaggacatcaaccaggcccaactgcgcctgctggcactgctcgccggacgc
gacgccgacgtgatggcggtaggggatgccaaccagtgcatctacgagtggcggggagcc
catcccgacaccatgcgcgagcatttcaccgcgactttcggtgcggcgaccgattacccg
ctctccaccaccttccgccatggccactcgctggcactgctggccaaccatgccatcgcc
gccaatcggcggcggcccgaccagctatgccttgccgcccccggtaatccacgcaccgaa
ctgaccgtcgaacaggggcgagcggcgttactggctaccctcgacagctggcaacacgtc
gggcgagcgttgagcgaggcgtgcttactggtgcgcagctgggcattgtcggtgcccgtt
caactgcaactgctgcaagccggcatcccgtttcgcctctcccgcgaggatcgcttcgtc
ttccgtctgccactggtgcaggcactcgccggctacctgcgcctggcacggaccccggcc
ttgctgctcgacccggcacatcttctgcgcatgttcgagcaacccacaccgttcgttgcc
cgtgaacgtctcgttgccctgacacagcggctggcgcagacgcagcactaccctgaacgg
gacgatcccttgctggccggcctcaaacccatgcagcgccgcaacctgaagcggcgctgg
acgctactgtgtgaacttccccgtctcggccgctgggagccggcgcgtctgctgacgcat
gtgatcgactccctggatgccgaaaaggtactcaagcgcgccgccgcacgccgcgagaaa
ggcgaagaggacgtgcgcctgctcgacgtgctcgtcgagcaggcgggggagacacgtgac
atcgacgccttcatcgaactgctcgagcgccctgtcgaaaatcatgccgacgggctgctg
atcaccaccgtgcacggcgccaagggattggaatggccgctggtgatggtcgcaggcgtc
aatgaagaagattttccccactacagccgcgacaatccgctgtcgcccgagcgtctggaa
gaagagcgacgcctgttttacgttgccgtaacccgcgcatgcgagcgcctgctgctgcta
cacgacggtggcgaccatcgtcccagtcgcttccttgccgagacggcatgggaagattgc
cgccaagtcgcggctcggctgtcggacccagcgcagggagatgcctcgctgacagtcgct
tcacccgagctggtctcgcgctacctggccgcagtggatcgtgagggtgtcaagttgacg
caacgcgcaccagcagttgctgagccgggcgcgacctattcaacacagccgtatcgcccc
gggcaatggttgcgccatgcggtattcggcgagggcgaggtcgtggtggtggagggcgat
cccgcggatccggtcatcgaggtaaacttcaaacaggccgggcggcgtcgcctgttggcc
tgccgagctcccattgaactgcttgccagcgagggggcgcgtaccgtgcctgtccaagga
gaacgcgcatga
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