Halomonas sp. MCCC 1A13316: HNO52_12115
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Entry
HNO52_12115 CDS
T10913
Name
(GenBank) HAMP domain-containing protein
KO
K05874
methyl-accepting chemotaxis protein I, serine sensor receptor
Organism
hamc Halomonas sp. MCCC 1A13316
Pathway
hamc02020
Two-component system
hamc02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
hamc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HNO52_12115
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
HNO52_12115
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
hamc02035
]
HNO52_12115
Bacterial motility proteins [BR:
hamc02035
]
Flagellar system
Chemotaxis proteins
MCPs
HNO52_12115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
TarH
HAMP
HAMP_2
IMPa_helical
GCIP_C
TMEM40
zf-C4H2
Sigma70_ner
PMC2NT
Motif
Other DBs
NCBI-ProteinID:
QOR39178
LinkDB
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Position
complement(2622596..2624374)
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AA seq
592 aa
AA seq
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MSRLIRNISINVSVIAALVSFAVLIGVVALLSFLSERQAERVMTDLERINTQQLNEINRA
DALLNVARVSLEIASNQIMLGRMADANQQLDIAVDRMDRAEERLSHFSAAPKSDDSLEMA
LELEQNFTTVLGLVRDQHEALDQLNTPGFSKLRDELIEPSVVLADNMTEFVHYGFSTGQA
MAADFRAQADRFAAIKLGALVLAALVLVLVYVGLRATVIRPLNSAVKHLQTIAKADLTGK
IPEGSRNEIGKLFNAMRNMQQSLTRIVGQVRGSSGSIHTGTREMASGNADLSSRTEQQAA
SLEETASSMEEITATVRQNADNARQASGLALDASTTAVRGGEVVDRVVKTMGDISTSSRK
ISDITSVIDSIAFQTNILALNASVEAARAGEQGRGFAVVAGEVRNLASRSATAAKEIKAL
IDGSVSQVKEGSTLAEQAGETMDDVVKAVRRVTDIMDEIAAASQEQSDGIEQVSQAVGQM
DQVTQQNASLVQQATAVAASLEEQASRLEQAVAIFRLSGDAGSTGTAAGDQYRTITKSSD
GAVAWVKHNDNPIPVKPSTSASSPSREVAEVDPKPHRKARRESMAEAEWEEF
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgactgattcgtaatatcagtatcaatgtttcggtgattgccgccttggtcagt
ttcgccgtgctgatcggcgtggtggcgctgctctcgttcctgtccgagcgccaggcggag
cgtgtcatgacggacctcgagcgtatcaatactcaacagctcaacgagatcaaccgcgcc
gacgctctgctcaacgtagcgcgcgtcagcctcgagattgcttccaatcaaatcatgctg
gggcgcatggccgatgccaatcagcagctcgatatcgccgtggaccgtatggaccgggcc
gaggagcgtttgagccatttttccgcagcgcccaaatccgatgactccttggaaatggcc
ctggagctcgaacagaatttcaccactgtgctcggcctcgttcgcgatcagcacgaggcg
ctggaccaactgaatacgccgggcttcagcaagctgcgcgatgagctcatcgagcccagt
gtcgtgctcgccgacaacatgaccgagttcgttcactatggtttcagcacgggacaggcg
atggccgccgacttccgtgcccaagccgaccgattcgctgccatcaaattgggtgccctg
gtcctggccgcgctggtactggtgctggtgtatgtcggcctgcgcgccacggtaatccgt
ccgctcaactccgcggtcaagcatctacagaccatcgccaaggccgacctgaccggcaag
attcccgaaggtagccgtaacgagatcggcaagctgttcaacgccatgcgtaacatgcag
cagagcctgacccgcatcgtcggccaggtccgcggcagtagtggctcgattcataccggc
acccgcgagatggccagtggcaatgccgacctgtcgtcacgtaccgagcagcaggcggcc
tcgctggaggagacggcctcgagcatggaggagattaccgccacggtccgccagaacgcc
gacaatgcgcgccaggccagcgggttggcgctggacgcctccaccacggccgtgcgcggg
ggcgaagtggtcgatcgcgtggtcaagaccatgggcgatatttcgaccagctcacgaaag
atcagcgacatcaccagcgtgatcgattcgatcgccttccagactaatatcctggcgctg
aacgcctcggtggaggcggcgcgagccggtgagcaggggcgtggcttcgcggtagtggcc
ggtgaagtgcgtaacctggccagccgcagtgcaacggcggccaaggagatcaaggcattg
atcgatggttccgtgtcgcaagtgaaggaggggtcgacgctggccgagcaagccggcgag
accatggatgatgtggtcaaggcggtacggcgcgtcaccgacatcatggacgagatcgcc
gcagcctcgcaggagcagagcgacggtatcgagcaggtcagccaagcggtcgggcagatg
gaccaggtgacccagcagaatgcctcgctggtacagcaggcaacagcggtcgccgcctcg
ctcgaagagcaggccagccgtctcgagcaagccgtggcgatatttcgcctgtcaggtgat
gccggcagtacaggcacagcggccggcgatcagtacaggacgatcaccaagtcatccgat
ggcgctgttgcctgggtcaagcacaacgataaccctatccctgtgaaaccgagcacgtcc
gctagctctccatcgcgtgaagtggccgaggtcgatcccaagccgcatcgcaaagcccgg
cgcgagtccatggctgaggctgaatgggaagaattttga
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