Halomonas sp. MCCC 1A13316: HNO52_14705
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Entry
HNO52_14705 CDS
T10913
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
hamc Halomonas sp. MCCC 1A13316
Pathway
hamc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hamc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HNO52_14705 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hamc03019
]
HNO52_14705 (orn)
03009 Ribosome biogenesis [BR:
hamc03009
]
HNO52_14705 (orn)
Messenger RNA biogenesis [BR:
hamc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HNO52_14705 (orn)
Ribosome biogenesis [BR:
hamc03009
]
Eukaryotic type
Pre-60S particles
RNases
HNO52_14705 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QOR39626
LinkDB
All DBs
Position
complement(3178296..3178880)
Genome browser
AA seq
194 aa
AA seq
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MPNTSAPREDLLVWIDLEMTGLEPERERIIEVATLITDSDLNLIAEGPVLAVHQSDDLLA
AMDDWNQKTHGESGLVERVKQSRIDTAEAERQTLEFLQQYVVSGSSPMCGNSVHQDRRFL
EREMPGLLGFFHYRNLDVSTLKELAKRWNPGALAGFSKRNTHQALDDIRESLAELAHYRT
TFLRLAGSERDEEE
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgccgaatacttccgcgccacgcgaggatctgctggtgtggatcgatctcgagatgacc
gggctggagcccgagcgcgagcgcatcatcgaggtggccaccctgatcaccgacagcgac
ctcaacctcatcgccgaaggcccggtgcttgccgtgcaccagtccgacgacctgcttgcg
gccatggatgactggaatcagaagacccatggagaatctggcctggtcgagcgggtcaag
cagagccgcatcgataccgccgaggccgagcgacagactctcgaattcttgcagcaatac
gtagtctcgggctcctcgcccatgtgcggcaacagcgtgcatcaggaccggcgcttcctc
gagcgcgaaatgcccggactgctgggcttctttcactaccgcaacctggatgtctcgacc
ctgaaggagctggccaagcgctggaacccgggcgcgctggccggcttcagcaagcgcaac
acgcaccaggcgctagacgatattcgcgaatcgctggccgagctggcgcactatcgcact
acgttcctgcgtctggcgggcagcgagcgcgacgaagaggagtga
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