Halomonas sp. MCCC 1A13316: HNO52_15110
Help
Entry
HNO52_15110 CDS
T10913
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
hamc Halomonas sp. MCCC 1A13316
Brite
KEGG Orthology (KO) [BR:
hamc00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
HNO52_15110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
HHH_7
YqgF
S1_RRP5
T2SSK
HHH_6
HHH_5
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
QOR39698
UniProt:
A0A7M1QDM7
LinkDB
All DBs
Position
complement(3263223..3265577)
Genome browser
AA seq
784 aa
AA seq
DB search
MDATTRIISRLAEELAVRPQQVTATVELLDGGATVPFISRYRKEVTGGLDDTQLRNLDER
LRYLRELEERRAAVLAAIDEQGKLTPELDRQIQTADTKQRLEDLYLPFKKKRRTKAQIAR
EAGLEPLADALLADPTLKPEAEAAKYIRPAEGDVPAVEDAKAALDGARQILMERFAEDPE
LVGRLRERLWQEGELSARVLPGKEREGAKFSDYFEHDEALAKAPSHRALAMFRGRNEGVL
TLAIRLPGEEEAPIHPAQVAIARHFDIRDEGRAADKWLADVVRWTWRVKLYTHLETELMG
RLRERAELEAIEVFAANLKDLLLAAPAGQKATLAIDPGLRTGCKVAVVDATGQFLEHATI
YPHAPRNAWDASLAELARLAEKHDVALVAVGNGTASRETDRLAGDLVKLLASKRVLSKVM
VSEAGASVYSASEYASKELPDLDVTIRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDV
SQLQLSRSLEAVIEDCVNAVGVDLNTASSALLSRVAGLNPALAEAIVARRNAEGAFASRK
QLLDVSRLGPKTFEQCAGFLRIMNGSNPLDASAVHPEAYPVVERIASRSGRPVASLIGDS
ATLKAVKPAEFADERFGVPTISDILKELDKPGRDPRPEFKAAEFREGVETLKDLEPGMIL
EGSVTNVTHFGAFVDIGVHQDGLVHISALSDKFVEDPRSVVKAGDIVKVKVMSVDIERAR
IGLSMRLDDQPSEAEGGKSSRGSQGERRGGQAKAQRKGAPSEQAQPNQMGALGAALLAAK
KGKS
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggacgccacgacccggatcatttcgcgcctcgccgaggagctcgccgttcgcccgcag
caggtgacagccaccgtggaactgctcgacggcggcgccaccgtgcccttcatctcccgt
taccgcaaggaggtcaccggtggcctcgacgatacccagttgcgcaatctcgacgagcgc
ctgcgctatctgcgcgagctcgaggagcgccgggcagcggtgctcgccgccatcgacgag
cagggcaagctgacgccggaactcgacaggcagatccagacggccgataccaagcagcgt
ctggaagacctctatctgcccttcaagaaaaagcgccgcaccaaggcgcagatcgcccgc
gaagcggggctcgagccgcttgccgatgcgctgctggccgatccgaccctgaagcctgaa
gccgaggcagccaaatacattcgccccgccgagggggacgtaccggccgtggaggatgcc
aaggcggcgctggacggcgcgcgacagatactgatggagcgcttcgccgaggatcccgag
ctggtgggtaggctgcgcgagcgactctggcaggagggcgagctcagcgcccgggtgctg
ccgggcaaggagcgtgaaggggccaagttctccgactacttcgagcacgacgaagcgctg
gccaaggcgccgtcccaccgcgcactggccatgttccgcggccgtaacgagggcgtattg
accctggccatccgtctgcccggcgaggaggaggcgccgattcacccggctcaggttgcc
attgctcgccacttcgatatccgcgacgaaggccgcgccgccgacaaatggctggccgac
gtggtgcgctggacctggcgggtcaagctctacacgcatctcgaaaccgagctgatggga
cggctgcgcgagcgcgccgagctggaagccatcgaggtcttcgccgccaatctcaaggat
ctgctgctcgcggcaccggcggggcagaaggccacgcttgccatcgaccccggcctgcgc
accggctgcaaggtggcggtagtggacgccaccggccagttcctcgagcatgccactatc
tatcctcatgcgccgcgcaacgcctgggacgcctcgctggccgaattggccaggttggcg
gagaaacacgacgtggcactggtcgccgtgggcaacggcaccgcgagccgagagaccgac
aggctggccggagatctggtcaagctcctcgccagcaagagagtgctgtcgaaggtgatg
gtcagcgaggccggcgcctcggtctactccgcctcggaatatgcctcgaaggagctgccc
gatctcgatgtcaccatccgtggcgcggtttctattgcccggcggcttcaggatccgttg
gccgagctggtcaagatcgaacccaagtccatcggcgtgggtcagtaccagcatgatgtc
tcccaactgcagctgtcgaggagcctcgaggcggtgatcgaggactgcgtcaacgccgtg
ggcgtcgacctcaataccgcatcgagcgcgctgctgtcgcgggtggccggcctcaacccg
gcactggccgaggccattgtcgcccgtcgcaacgcggaaggggctttcgccagccgtaag
caactgctcgacgtcagtcgcctggggcccaagactttcgaacagtgcgctggctttctg
cgcatcatgaacggttccaatccgctggacgccagcgccgtgcaccccgaggcctatccg
gtggtggagcgtatcgccagccgcagcgggcgcccggtggccagcctgatcggcgacagc
gccacgctcaaggcggtcaagccggccgagttcgccgacgagcgcttcggcgtgcccacc
atcagcgatatcttgaaggagttggacaagccgggccgcgatccgcgccccgagttcaag
gccgccgagttccgcgaaggcgtggagacgctcaaggacctggagccgggcatgatactc
gagggcagcgtgaccaacgtgacccacttcggcgccttcgtcgatatcggcgtgcaccag
gatggcctggttcacatctcggcgctatccgacaagttcgtcgaggacccgcgttcggtg
gtcaaggccggcgacatcgtcaaggtcaaggtgatgagcgtggatatcgaacgcgcccgc
atcgggctctccatgcgtctcgacgaccagccgagtgaggccgagggtggcaaatcgtcg
cgcggtagccaaggagagcggcgtggcgggcaggccaaggcgcagcgcaagggcgcgcct
agcgagcaagcccagcccaatcagatgggcgccctcggggccgcgctgctagcggcgaag
aagggcaaatcttga
DBGET
integrated database retrieval system
