Halomonas sp. MCCC 1A13316: HNO52_15400
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Entry
HNO52_15400 CDS
T10913
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
hamc Halomonas sp. MCCC 1A13316
Brite
KEGG Orthology (KO) [BR:
hamc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hamc03021
]
HNO52_15400 (rpoS)
Transcription machinery [BR:
hamc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HNO52_15400 (rpoS)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
QOR39748
UniProt:
A0A7M1QDS4
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All DBs
Position
complement(3329191..3330177)
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AA seq
328 aa
AA seq
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MSMLERDLQDVDLDDVTEAEQDLETDSDNSASDDEAAFEKALSREDKHYHHSLDATQIYL
NEIGFSPLLTPEEEVYYGRLAQKGDPAGRARMIESNLRLVVKIARRYLNRGLTLLDLIEE
GNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERALMNQTRTIRLPIHVVKELNIYLRAA
RELTQKLDHEATPEEIADHLDKPVEAVKKMMGLNERVSSVDYPMGGDSDKPLIETLADDN
EQGPESSLVDVDVKQHVDEWLAELTEKQMEVVVRRFGLRGHEAATLEEVGDEIGLTRERV
RQIQVEALKKLRRVLEKQGLSMDNIFNE
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgcttgaacgggaccttcaggatgttgatctcgatgacgtcaccgaggccgaa
caggacctcgagacggattcggacaattcggccagtgacgatgaggccgccttcgaaaag
gcgctgagtcgcgaggacaagcactaccaccacagcctagacgccactcagatctatctc
aacgagatcggattctcgcccctgctgacgcccgaggaggaggtgtactacggccgcctg
gctcagaagggcgaccccgcaggccgggcgaggatgatcgaatcgaacctgcgcctggtg
gtcaagatcgctcggcgctatctcaaccgcggactgacactgctcgatttgatcgaggag
ggaaacctcggtctgattcgtgcagtggagaagttcgaccccgagcggggcttccgcttc
tccacttacgccacctggtggatccgtcaaaccatcgagcgggcgctgatgaaccagacc
cgcaccatccggctgccgatccacgtcgtcaaggagctcaacatctatctacgggcggca
cgtgagctgacccaaaagctggatcacgaggccacgccggaagagattgccgatcatctc
gacaaaccggtcgaggcggtgaagaagatgatggggctcaacgagcgcgtctcctcggtg
gactatcccatgggcggcgacagcgacaagccgctgatcgagaccctggccgacgacaac
gagcagggccccgagtcgtcgctggtcgacgtcgatgtcaagcagcacgttgacgagtgg
ctggcggagttgaccgagaagcagatggaagtggtcgtgcggcgcttcggattacgcggc
cacgaggctgcgaccctggaggaggtcggcgatgagatcggcctgacccgcgagcgggtg
cgccagatacaggtagaggcgctcaagaagctgcgccgcgtactcgagaagcaaggcctc
tcgatggacaacatcttcaacgagtaa
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