Halomonas sp. MCCC 1A13316: HNO52_16765
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Entry
HNO52_16765 CDS
T10913
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
hamc Halomonas sp. MCCC 1A13316
Pathway
hamc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hamc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HNO52_16765 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hamc03400
]
HNO52_16765 (recD)
Enzymes [BR:
hamc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HNO52_16765 (recD)
DNA repair and recombination proteins [BR:
hamc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HNO52_16765 (recD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
Viral_helicase1
SH3_13
AAA_22
Helicase_RecD
UvrD-helicase
SLFN-g3_helicase
nSTAND3
AAA_28
NTPase_1
T2SSE
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
QOR39986
UniProt:
A0A7M1QDU8
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All DBs
Position
3641185..3643617
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AA seq
810 aa
AA seq
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MSKRSKHHDDATPDLFADLGEESAGDAPDKSEPAKPELPQAAQGNVKTALHDTQALFALL
DRWVERSWLRALDRALASFFQREVSDAPPLLLLAAALASHQLGRGHVCLDLAQTLAAPDL
ALSLPPEGDDLSDPPPLPSDLLAGLELATWRDALNHPALVADGSGPGNTPLVRSEHDGNV
RLYLRRYWQYEQDIRGLIGSRLEAPAQAEADTATLPRALAALFPQSHALDWQQAACALAS
RSRFAVITGGPGTGKTTTVVKLLALIQALALGETTQPGSGAPRPLRIRLAAPTGKAAARL
NESIAKQVNALKLEGLVDATGLTAQLERVASEDETRRSPTKTRSLRDVNEQFEEDSNAVS
SSAVALLQNSIPTEVTTLHRLLGSRPDTRHFRHHAGNPLALDALVIDEASMVDIEMMAAV
LTALPPRARLILLGDKDQLASVEAGAVLGDLCQRAEGGHYTPATCDWLERVIGMPIPERY
CDEAGQPLDQAIAMLRVSHRFDAKSGIGQLAEAVNRPLGSDHGQKEKKRAVRQIFQKDYA
DIARLALADADDPALDRLVVNGNPAGFANSGEGRHDRRGEPIAPPVGYSHYLEVMKSARP
AQPYFGEGEARQPYDDWARQVLAAHGHFQLLCALRKGPWGIQGLNPRIGRALRRADWLKA
SDLELEQGWFEGRPVLVTRNDYGLGLMNGDIGITLAVPEARSVIDSPGSTLLRVAFPASD
GSGNIKWVLPSRLQAVETVFAMTVHKSQGSEFTHTALLLPDAPNPILTRELVYTGITRAR
DWLTLVETGRGMLDEAVTREVVRVSGLGRL
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcgcagcaagcaccacgacgacgccacccccgacctgttcgccgatctcggt
gaggaatcagcaggcgacgcacccgacaagagcgaacctgccaagccggaactgccccaa
gccgcgcagggcaacgtaaaaaccgcgcttcacgacacccaagcgctgttcgccctgctc
gaccgctgggtggagcgcagctggctgcgcgcgctggaccgcgcgctggccagcttcttc
cagcgcgaggtgagcgacgcccctcccctgctgctgctcgccgccgcccttgccagccat
cagctgggccgcggccatgtttgcctcgacctcgcccagaccttggccgctcccgacttg
gcgctctcgctaccgccggaaggcgacgacctgagcgacccgccaccgctgcccagcgac
ctgctggcagggctggaactcgccacctggcgcgacgccctgaaccaccccgccctggtg
gccgacggtagtggtccaggcaacactccgctggtgcgcagcgaacacgacggcaacgtg
cggctctacctacgtcgctactggcagtacgagcaggacattcgcgggctgatcggttcc
cggctcgaggctcccgctcaggcagaagccgacaccgccaccctgccccgggcgctggcc
gcactgtttccccaaagccatgcgctcgactggcagcaggccgcctgtgcactggccagc
cgctctcgcttcgcggtgatcaccggcggcccaggtaccggcaagaccactaccgtggtc
aagctgctcgccctgatccaggcgctggccctgggcgaaaccacacaacccggctcaggt
gccccgcgcccgctgcgcatccgcctggccgcccccaccggcaaggccgccgcacggctc
aacgaatccatcgccaagcaggtgaatgcgctcaagctagagggcctggtcgatgcgaca
ggtcttaccgctcagcttgagcgcgtagcgagcgaagacgagacaaggcggagcccgacg
aaaacgcggagtttacgggacgtaaatgagcagtttgaggaggactccaacgccgtatcg
tcgagcgcagtagcgctgctccaaaacagcattcccaccgaagtcaccacgctgcaccgc
ctgctgggctcgcgaccggacactcgccactttcgccaccacgccggcaacccgctggcg
ctggacgccctggtgatcgacgaagcctcgatggtggatatcgagatgatggccgccgtg
ctcaccgccctgccgcccagggcgcggctgatcctgctcggcgacaaggaccagctcgcc
tcggtggaagccggcgccgtactcggcgacctgtgccagcgcgccgaaggcggccactac
accccggccacctgcgactggctggaacgcgtgatcggcatgccgatacccgaacgatac
tgcgacgaagcagggcagccgctggaccaggccatcgccatgctgcgggtaagccaccgc
ttcgatgcgaaaagcggcatcggccagctcgccgaggcggtcaatcgcccacttggttcc
gatcatggtcagaaggaaaagaaacgcgccgtacgccagatcttccagaaggattacgcc
gatatcgcccgcctcgccctggcggacgccgacgatccggcgctggaccgcctggtggta
aacggcaacccggccggtttcgccaacagcggtgaaggccgacacgaccgccgcggcgaa
cccatcgccccgccggtcggctacagccactacctggaagtgatgaaatcagcgcgcccc
gcgcagccctacttcggcgaaggcgaagcccgccagccctatgacgactgggcgcgccag
gtgctcgccgcccacggccacttccagttgctgtgcgccctccggaaaggcccctggggc
atacaaggactgaacccgcgcatcggccgcgcgctgcgccgcgccgactggctcaaggcc
agcgacctggagctggaacagggctggttcgaaggccgcccggtgctcgtcacccgcaac
gactacggcctggggctgatgaacggcgatatcggcatcaccctcgccgtacccgaagcc
cgcagcgtcattgattcgcccggcagcaccctgctacgcgtcgccttcccggccagcgac
ggcagcggtaacatcaagtgggtgctgcccagccgcctgcaggcggtggagaccgtgttc
gccatgacggtacacaaatcccagggctctgaattcactcacaccgccctgctgctcccc
gacgcccccaaccccatcctcacccgcgagctggtctacaccggcatcacccgcgcacgg
gactggctcacgctggtggagacggggcgcggcatgctggatgaagcggtgacgagggag
gtggtcagggtgagtgggttggggaggttgtaa
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