Halomonas sp. MCCC 1A13316: HNO52_17145
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Entry
HNO52_17145 CDS
T10913
Name
(GenBank) PDZ domain-containing protein
KO
K08676
tricorn protease [EC:3.4.21.-]
Organism
hamc Halomonas sp. MCCC 1A13316
Brite
KEGG Orthology (KO) [BR:
hamc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hamc01002
]
HNO52_17145
Peptidases and inhibitors [BR:
hamc01002
]
Serine peptidases
Family S41: C-terminal processing peptidase family
HNO52_17145
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tricorn_N
PD40
Tricorn_2nd
Peptidase_S41
DPPIV_N
Tricorn_C1
Beta-prop_THOC3
PDZ
PDZ_2
PDZ_6
Gmad1
WD40
PDZ_Tricorn
Motif
Other DBs
NCBI-ProteinID:
QOR40049
LinkDB
All DBs
Position
3707591..3711223
Genome browser
AA seq
1210 aa
AA seq
DB search
MRKVLTRHVLTPAKPLVFKFSLLALIAGLAFSASSALLAQSGQVGLPRFPSISPDGSELI
FSWRGDLWRASSDGGEAVRLTRHNLDDLHSSWSPDGEWIVFASMRDGYLNLWRMRRDGSE
LSQLTHGDQHLRSPSYASDQNGEPVITFSGMLEADVYRDQRPYRIDPEGGDYSRLHDAFG
SEPQFSPSGQQVVFTRGGAYHDWNRRHYRGPDAMNIWLHEVGTERFEPLTERNGDDGMAR
WVDEDTLLFMSDREDQTVNLYRMELDAERTIERLTELDQRDLQYFDVSRDGSTAVLQVWD
TLLTLDLETPNAEPEPITLRAPDDGRDRHALRRVDRDVSEAALSPDGQTMAYIAYGRVYV
RHVDEQSPTRLVTSGTHARHHSLAWSPDGLRLYFVNDADGSESIYEARVALTRDEVRRSH
ERQRARSRVSARHWDGNTTVSLASTGPDVDPELDVQENTEADYDPDLAVRGEEPEDPFAP
QDPGFILDPVLIPQPGDPNDVPSTTQEPQVEIESIPEEDLEEEPPEDFPTNRDPTRWHDA
IQFNVSPVVAGDANDRDVSPSPDGRFLAFRRGRGDLVILNLESGEERTLVEGWDSFMRWR
WSPDSRYIAYSQNDLDFSANIFVVPANGSEEPVNITRHPRNDLNPRWSADGRKLTFISNR
SGENYDLYRVYLDREIETYTPRELSTYYRNAREEARDRSPLPVDGDAEAATQDAAELDLE
NAWRRIERITASPTHQTANEMTPGGDRYVFNDGSAGLVATNWDGSNRTRIGPRANVQQLN
ITGEQVVYIVNGRVGVANLSGNGSPRYLDISDRLRIDLRQQALQKFYEAARVIGENFYRT
DLKGLDWPAVVADYASLIRRARTSSEFSDIANRLMGELAASHMGVSNPGPVSALREPSGR
LGIEYESIVSKQDGRLGFRVTEVIPEGPASRGPMPLAAGDIITEIGLQPFEEHETLLQRL
SGQVDQEVIVTIDRPGEDGYTEYRTMLRTVGLSELARLKYDAFREESRRRVDELSNGRLG
YLHIQAMNQTSLEGFQGDLYAAAEGKDGLIIDVRNNGGGNTTDRILTSIMAGEHAYTIPA
GADRNETGHYPQDRLDAPRYTLPINMLANEKSYSNAEILAHAFTTLDRGRLIGQQTYGGV
ISTLSHTLIDGATVRLPFRGWYLPDGTDMEHNGAIPDLLVEQTPQDEVAGRDRQLEAAVD
DLLKRIDGEE
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaggttctcacccgtcacgtcctcactcccgccaagcccttggtctttaaattc
tcgctcctggcactcatcgccggcctggcattcagcgcgtcgagtgccctgctggcgcaa
tccggccaggtcggattacctcgtttcccctcgatcagccccgatggttcagaacttatc
ttcagttggcgtggcgacctgtggcgtgcatcgagcgacggcggcgaggcggtgcgcctg
acccgtcacaacctcgacgacctgcactccagttggagcccggacggcgagtggatcgtg
ttcgcctcgatgcgcgacggctacctcaacctgtggcgcatgcgccgagacggcagcgaa
ctctcccagttgacccatggcgaccagcacctgcgcagcccttcctatgccagtgaccag
aacggcgagcctgtaatcaccttctcgggcatgctcgaggccgacgtctaccgcgaccag
cgcccttaccggatcgacccggagggtggcgactattcccggctgcacgatgccttcggc
tccgagcctcagttctcgccgagtggccaacaggtcgtcttcacccgcggcggggcctac
cacgactggaaccgtcgacattaccgcggcccggatgccatgaacatctggctgcacgag
gtcggcaccgagcgtttcgagccgttgaccgagcgcaacggcgatgacggcatggcccgt
tgggtcgatgaggacaccttgctgttcatgtccgaccgcgaagaccagacggtcaatctt
taccgcatggaactcgatgccgagcgtacaatcgagcggctcactgagctagatcagcgc
gatctgcaatatttcgatgtttcccgcgacggtagcactgccgtactgcaggtgtgggac
acgctgctcactctcgacctggagacgccgaacgccgaacccgagcccatcactcttcgc
gcgcccgacgatggtcgcgacagacatgccctgcggcgtgtcgatcgagacgtcagcgag
gcggccttgagcccggatggacagaccatggcctatatcgcctatggccgcgtgtacgtg
cgtcatgtcgatgagcagagcccgacccggctggtcacgtcaggcacccatgcccggcac
cacagcctggcctggtcgcccgacggcctgcggctctacttcgtcaacgacgccgacggc
agtgagtcgatctacgaggcacgggtagcactgactcgggacgaggtgcgtcgcagccat
gaacgccagcgtgcgcgaagccgtgtctccgcccgtcactgggatggcaacaccaccgtc
tcgctggcctcgacgggccccgatgtcgaccccgagctcgacgtccaagagaacaccgag
gcggactacgaccccgacctggcagtacgcggcgaggagccggaggatcccttcgccccg
caggatccaggtttcatcctggaccccgttctgattccgcaacccggcgatcccaacgac
gttccctccactacccaggaaccccaggtggaaatcgagagcatccccgaagaggacctg
gaggaggagccgcccgaggactttcccaccaaccgtgacccgacgcgctggcacgatgcc
attcagttcaatgtcagcccggtggtcgccggtgacgctaacgatcgagatgtgtcaccc
tcaccggatgggcgcttcctggccttccgccgtggccgtggcgacctggttatcctcaat
ctcgagagcggagaagagcgcactctggtcgaaggttgggacagcttcatgcgatggcgc
tggtcccccgacagccgctacattgcctattcccagaacgacctcgacttcagtgccaat
atctttgtggtcccggcgaacggctcggaagagccggtcaacattacccggcatccacgc
aacgacctcaatccgcgctggtcggcggacggccgcaagctgaccttcatctccaaccgc
tccggagagaattacgacctgtaccgggtttacctggaccgcgagatcgagacctatacg
ccacgcgaactcagcacctactaccgtaatgcccgtgaggaagcgcgagatcgctctccg
ctgccggtcgacggcgatgctgaagcagcgacacaggatgctgcggagctcgacttggag
aacgcctggcgccgcattgagcgcatcaccgcctccccgacccaccagacagccaacgag
atgaccccggggggcgaccgctacgtcttcaatgacggcagcgcagggctagtggcgaca
aactgggacggcagcaaccgaacccgcatcggccccagggccaacgtgcagcagctcaac
attaccggcgagcaagtggtctacatcgtgaatggccgggttggcgtggccaatctctcc
ggcaacggctccccccgctatctggacatctccgaccggctgcgcattgacctgcgccag
caggcgctgcagaagttctacgaggcggcccgcgtcatcggcgagaacttctaccgcact
gatctgaaggggctggactggcctgccgtagtcgcggattacgcctcgttgattcgccgt
gctcgtacttccagcgagttcagtgacatcgccaaccgactgatgggtgaactggcggcg
tcgcatatgggcgtgtccaaccccggcccggtgtcggcgctgcgtgaaccctcgggaagg
ctgggtatcgagtacgaaagcatcgtctcgaagcaagacggccgcctcggctttcgcgtc
accgaggtgataccggagggaccggcgagccgcggccccatgcctctggcggcgggtgac
atcattaccgagatcggcttgcagcccttcgaggagcacgagaccctgctacagcgattg
agcggccaggtggaccaggaggtgatcgtcactatcgatcgtccgggcgaggatggttat
accgaataccgcaccatgctacgtacggtgggtctttccgagctcgcccgcctgaaatac
gacgccttccgcgaggagagccggcgccgcgtcgacgaactttccaacggtcggctcggc
tatctgcatatccaagccatgaaccagacctcgctggagggtttccagggcgatctctac
gccgcagcagaaggcaaggatggcttgatcatcgacgtgcgcaacaatggcggtggcaat
acgacagatcgcatcctgacctctatcatggcgggagaacacgcctacacgattcccgcg
ggcgccgatcgcaacgagaccggccactatccccaggaccgcctggatgcgccgcgctat
acgctgccgatcaacatgctggccaacgagaagagttattccaacgccgagatcctggca
catgccttcaccacgctcgatcgcggcaggctgatcggtcagcagacgtacggcggggta
atctccactctcagccatacgctgatcgacggggccacagtacgcctgccctttcgcggt
tggtacctgccggatggcaccgacatggaacacaacggcgccataccggacctgttggtc
gagcagacgccgcaggacgaggtggccggtcgcgaccgccagctcgaggcggcggtagac
gacctgttgaagcgcatcgatggggaggagtaa
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