Halomonas sp. MCCC 1A13316: HNO52_18535
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Entry
HNO52_18535 CDS
T10913
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
hamc Halomonas sp. MCCC 1A13316
Brite
KEGG Orthology (KO) [BR:
hamc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
hamc03110
]
HNO52_18535 (clpB)
Chaperones and folding catalysts [BR:
hamc03110
]
Heat shock proteins
HSP100
HNO52_18535 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_16
AAA_22
Sigma54_activat
TniB
AAA_14
ATPase_2
AAA_24
IstB_IS21
nSTAND3
Mg_chelatase
DUF815
AAA_7
AAA_18
bpMoxR
NBD_SMAX1
NACHT
ABC_tran
AAA_19
DNA_pol3_delta2
ResIII
Zeta_toxin
AAA_25
T2SSE
PduV-EutP
Gp58
OEP
EHN
CC_CDK5RAP2
Motif
Other DBs
NCBI-ProteinID:
QOR40290
LinkDB
All DBs
Position
complement(3994655..3997237)
Genome browser
AA seq
860 aa
AA seq
DB search
MRFDKFTAKLQNAVADAQSLAVGRGHNQLEPGHLLLALLDTRDAGLKALIQKAGGDAERL
RDTLVGHLDDLPQVGQFTGEVQPSRDLIKLFNLTDREAQKRGDQYIASELVLLAALEMGH
AVTKLLTQAGVTRKALESAIDSVRGGERVDDPNAEEQREALEKYTLDLTERAADGKLDPV
IGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKDKRVLSL
DMGSLLAGAKFRGEFEERLKSVLKELAQEEGRVILFIDELHTMVGAGKAEGAMDAGNMLK
PALARGELHCVGATTLDEYRKYIEKDAALERRFQKVQVDEPSEEDTVAILRGLKERYEVH
HGVDITDGAIIAAAKLSTRYITDRQLPDKAIDLIDEASSRIRMELDSKPEEMDRLDRRLI
QLKMEREHLKKETDEASKKRLESLQEQVDDLEREYADLDEIWKAEKASIQGAAQFKDELD
RARIDLEQARRQGDLGRMSELQYGVIPELEKKIAESSETEADTSQHKLLRSNVTEEEIAE
VVSRWTGIPVAKMLEGERDKLLRMEEALHQRVIGQEEAVTAVANAVRRSRAGLADPNRPN
GSFLFLGPTGVGKTELCKALANFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEE
GGYLTEAVRRKPYSVLLLDEVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTVIVMTS
NMGSDIIQRMGGADEQYEAMKNAVMDVVGMHFRPELINRIDEVVVFHALRQEQIEAIAGI
QLDRLRSRLAEHGMQLEISDEAMAQLALAGFDPVFGARPLKRAIQSRIENPLAQDLLAGR
FVSGDTIRVDLKDDTLVFSR
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttcgacaagttcaccgccaagctgcagaacgccgtggccgacgctcagtccctg
gccgtggggcgaggacacaaccagctcgagcccggccacctgttgctggcgttgctggat
acgcgtgatgccggcctcaaggcgctcattcagaaggccggcggcgatgccgagcgtctg
cgcgacaccttggtgggtcatctggacgatctgccccaggtcggccagttcaccggcgag
gtgcagccgtcgcgcgatctgatcaagctgttcaacctcaccgaccgcgaggcgcagaag
cgtggtgaccagtacatcgccagcgagctggtgctgcttgccgctctcgagatgggccat
gcggtgaccaagctgctgacccaggccggcgtgacccgcaaggcattggagagcgccatc
gacagcgtacgtggcggcgaacgggtcgatgacccaaacgccgaggagcagcgcgaggca
ctggagaagtacacgctggacctcaccgagcgtgctgccgacggcaagctcgaccccgtg
atcggccgcgacgatgagatccgccgtaccatccaagtgctgcagcggcgcaccaagaat
aacccggtgttgatcggcgagcccggcgtgggcaagaccgctatcgtcgaaggcctggct
cagcgcatcgtcaacggcgaggtgccagaggggctcaaggacaagcgcgtgctgtcgctc
gacatggggtcgctgctggccggagccaagttccgcggcgagttcgaggagcgcctgaag
tcggtgctcaaggagctggcccaggaggagggccgggtgatcctgttcatcgacgagctg
cacaccatggtcggcgccggcaaagccgagggcgccatggacgccggcaacatgctcaag
ccggcgctggcgcgcggcgagctgcactgcgtgggcgccactaccctcgacgagtaccgc
aagtacatcgagaaggatgccgcgctggagcggcgtttccagaaggtgcaggtcgacgag
ccctccgaggaggataccgtggctatcctgcgcggcctcaaggagcgctacgaggtgcac
catggtgtcgatatcaccgatggcgcgatcatcgctgccgccaagctctcgacccgctac
atcaccgaccgccagttgcccgacaaggccatcgacctgattgacgaggcgtcgtcgcgc
attcgcatggagctcgactccaagcccgaggagatggatcgcctcgaccggcggctgatc
cagctcaagatggagcgtgagcacctcaagaaggagaccgacgaagcctcgaagaagcgt
ctcgagagccttcaggagcaggtcgacgatctggagcgtgagtacgccgacctggatgag
atctggaaggccgagaaggccagcattcagggcgccgctcagttcaaggacgagctcgac
cgtgctcgcatcgatctggagcaggcgcgtcgccagggcgatctcggccgcatgtcggag
ctgcagtacggcgtgattccggaactggagaagaaaatcgccgagtcgagcgaaaccgag
gccgacacctcgcagcacaagctgctgcgctccaacgtcaccgaggaggagatcgccgag
gtggtgtcgcgctggaccggtatcccggtggccaagatgctcgagggtgagcgcgacaag
ctgctgcgcatggaggaggcgttgcatcagcgggtgatcggccaggaggaggctgtcact
gcggtggccaacgccgtgcgccgttcgcgtgcggggcttgccgaccccaaccgccccaat
ggctcgttcctgttcctcggtccgaccggggtgggcaagaccgagctgtgcaaggcgctg
gccaatttcctcttcgacaccgaagaggcaatggtgcgcatcgacatgtcggagttcatg
gagaagcactccgtggcacggctgatcggcgcgcctcccggctacgtgggttacgaggag
ggcggctacctgaccgaggccgtgcggcgcaagccctattccgtgctgctgctcgacgag
gtggagaaggctcatccggacgtcttcaatattttactgcaagtgctggaggatggccgc
ttgaccgatggccaggggcgaaccgtggactttcgtaatacggtgatcgtgatgacctcc
aacatgggctcggacatcatccagcgcatgggcggtgccgacgagcagtacgaagcgatg
aagaacgccgtcatggatgtggtggggatgcatttccgccccgagctgatcaaccgcatc
gatgaggtggtggtgtttcatgccctgcgacaagagcagatcgaggcgatcgctggcatc
cagttggaccgcctgcggtcacgcctggccgagcacggtatgcagctggaaatcagcgac
gaggccatggcccagctcgccctggcgggcttcgatccggtattcggggcgcggccgctc
aagcgggcgatccagagtcgtatcgagaatccgttggctcaggacctgcttgccggccgc
ttcgtttccggcgacacgattcgggtcgacttgaaggacgacaccttggtgttcagtcgc
tga
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