Halomonas sp. MCCC 1A13316: HNO52_20380
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Entry
HNO52_20380 CDS
T10913
Symbol
rph
Name
(GenBank) ribonuclease PH
KO
K00989
ribonuclease PH [EC:
2.7.7.56
]
Organism
hamc Halomonas sp. MCCC 1A13316
Brite
KEGG Orthology (KO) [BR:
hamc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hamc03016
]
HNO52_20380 (rph)
Enzymes [BR:
hamc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.56 tRNA nucleotidyltransferase
HNO52_20380 (rph)
Transfer RNA biogenesis [BR:
hamc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HNO52_20380 (rph)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
QOR40618
UniProt:
A0A7M1QG41
LinkDB
All DBs
Position
complement(4378537..4379274)
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AA seq
245 aa
AA seq
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MASELTRPSGRRPDQSREIRLTRDYTRHAEGSVLVEFGDTKVLCNASVEAGVPRWLRGKG
QGWVTAEYGMLPRATHTRGGREAARGKQGGRTLEIQRLIGRSLRAAVNLKKLGEFTVTVD
CDVIQADGGTRTASITGGCVALVDAIRYLQRKKMIKGDPFVQLVSSVSVGLYKGMAVVDL
DYPEDSGAETDMNVVMAEAGGLIEVQGTAEAGVFSRQQLNAMLELAENAGAELFDHQREA
LGIRR
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgaactcacacgcccgagcgggcgtcgccccgatcagtcccgcgagattcgc
ctgacccgcgattacacccgccatgccgaaggctcggtgctggtggagttcggcgatacc
aaagtgctgtgcaacgccagcgtcgaggccggcgtgccgcgctggctacgtggtaagggc
cagggctgggtcaccgccgagtacggcatgctgccgcgcgccacgcatacccgtggcggc
cgcgaggcagcccggggcaagcaaggcgggcgcacgctggagattcaacgcctgatcggc
cgttcgctgcgtgccgcggtgaacctgaagaagctgggtgaattcaccgtcaccgtggac
tgcgacgtgatccaggctgacggcggtacccgcacggcttcgatcaccggcggctgcgta
gcattggtggatgccatccgttacctgcagcgcaagaagatgatcaagggcgaccccttc
gtgcagctggtcagctcggtctcggtggggctctacaagggcatggcggtggtcgacctc
gactaccccgaagacagcggcgccgagaccgacatgaacgtggtgatggccgaagctggc
gggctgatcgaggtgcagggtaccgccgaggcgggggtcttctcgcgccagcagctcaac
gccatgctggagctggccgaaaatgccggggccgagctcttcgaccaccagcgcgaggcg
ctgggcattcgtcgctaa
DBGET
integrated database retrieval system
