Halomonas sp. MCCC 1A13316: HNO52_20540
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Entry
HNO52_20540 CDS
T10913
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
hamc Halomonas sp. MCCC 1A13316
Pathway
hamc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hamc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HNO52_20540 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hamc03021
]
HNO52_20540 (rpoZ)
03400 DNA repair and recombination proteins [BR:
hamc03400
]
HNO52_20540 (rpoZ)
Enzymes [BR:
hamc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HNO52_20540 (rpoZ)
Transcription machinery [BR:
hamc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HNO52_20540 (rpoZ)
DNA repair and recombination proteins [BR:
hamc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HNO52_20540 (rpoZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
QOR40644
UniProt:
A0A7M1QGV7
LinkDB
All DBs
Position
4416759..4417019
Genome browser
AA seq
86 aa
AA seq
DB search
MARVTVEDCLDNVENRFKLVMISTQRARQLSRGSRDAQLPWENDKPTVMALREIAAGLVD
HTVLDEPIEAPVRIRREGEPGMSFEE
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtgtcaccgtcgaagattgtctggataacgtcgaaaatcgcttcaagctggtg
atgatctccacccagcgcgctcgtcagctctcgcgcggttcgcgcgacgcccagctgccg
tgggaaaacgacaagcccaccgtgatggcgctgcgcgagatcgccgccgggctggtcgac
cataccgtgctggacgagccgatcgaggcgccggtcaggattcgccgcgaaggcgaaccg
ggcatgtccttcgaggagtaa
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