KEGG   Homarus americanus (American lobster): 121853561
Entry
121853561         CDS       T07477                                 
Name
(RefSeq) THO complex subunit 4-like
  KO
K12881  THO complex subunit 4
Organism
hame  Homarus americanus (American lobster)
Pathway
hame03013  Nucleocytoplasmic transport
hame03015  mRNA surveillance pathway
hame03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hame00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121853561
  09122 Translation
   03013 Nucleocytoplasmic transport
    121853561
   03015 mRNA surveillance pathway
    121853561
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hame03019]
    121853561
   03041 Spliceosome [BR:hame03041]
    121853561
Messenger RNA biogenesis [BR:hame03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     121853561
    TREX complex
     121853561
Spliceosome [BR:hame03041]
 Complex C
  Other components
   EJC/TREX
    121853561
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    121853561
SSDB
Motif
Pfam: RRM_1 FoP_duplication YHR127W_C RRM_3
Other DBs
NCBI-GeneID: 121853561
NCBI-ProteinID: XP_042203714
LinkDB
Position
Unknown
AA seq 272 aa
MATKVDMSLDDIIKTQKIKPGNRRGGGGGGGVGRGMRGRGRGALRRGGGVSTGPNRGRQG
QRPITTGNRQPFGQRGNVDGRWSHDMYQGGGGGGGGGGGGVRMQQMTGPAKLLISNLDFG
VSDSDIHELFAEFGTMRNAAVHYDRSGRSLGTAHVVFERQADAHKALKQYNGVHLDGRPM
NITLDGASVGMRNTAPVKRLSQGPRPVSGFGGRGGGRGMRGNTRGGRGTRGGGGRIGGRG
RGFGGRGGQRTKVPTAEELDAELDAYVNQVNK
NT seq 819 nt   +upstreamnt  +downstreamnt
atggcgacgaaagtggatatgagtttagacgacatcataaagacacagaagatcaagcca
ggtaacaggagaggaggaggaggaggaggaggtgttggtagaggtatgagaggaagaggg
agaggagcattaagacgtggtggcggcgtctctacaggaccaaaccgcgggcgtcagggc
cagcgacccatcaccaccgggaacagacaaccattcggacaaaggggcaatgtagatggt
agatggagccatgacatgtaccagggaggaggaggaggaggtggtggaggaggaggaggg
gtgcgtatgcagcagatgactggaccagcaaaacttttgatctcaaatttggactttggt
gtttccgattctgatattcacgaattatttgctgaatttggtacaatgaggaatgcagca
gttcactatgatcgctcgggaagatcgttgggtactgcccatgttgtttttgagcggcaa
gcagatgctcacaaagctcttaaacagtacaatggtgttcatctcgatggtcgacctatg
aacatcactttggatggtgcgtctgtcgggatgagaaatactgcacctgtcaagagactc
tcacaaggacctcgacctgtttctggttttggtggtcgtggaggcggcagaggtatgcgt
ggcaacaccagagggggcagagggaccagaggcggcggcggccgcattggtggtcgtggc
agaggctttggagggcggggagggcaaaggacaaaggtgcccaccgctgaagagttggat
gctgagcttgacgcctatgtcaaccaggtcaacaagtga

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