Homarus americanus (American lobster): 121854198
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Entry
121854198 CDS
T07477
Name
(RefSeq) protein CASC3-like isoform X1
KO
K14323
protein CASC3
Organism
hame
Homarus americanus (American lobster)
Pathway
hame03013
Nucleocytoplasmic transport
hame03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121854198
03015 mRNA surveillance pathway
121854198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hame03019
]
121854198
Messenger RNA biogenesis [BR:
hame03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
121854198
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
121854198
NCBI-ProteinID:
XP_042204622
LinkDB
All DBs
Position
Unknown
AA seq
866 aa
AA seq
DB search
MKRTKGPVKQYNMADRRRRRKLGTDDDSDDSDDEQPAPRKTVNGSDGGDSEYESADEEEL
GEEEEEEEDELIIMPDGVVLGEDNKQLDDDEDRKNPQYIPKKGTFYEHDDRTAAEDDVEK
PAEEPVIKKEVGKKKVWKEDDKWNHDKFDEFEQAPKSREELISIYGYDIRNEEGPPRARR
RRRYGRGPNKYTRNWEDLDAYAKPVRGAVRGGPGRGGSRSLTGSRKTLDNDEEFPALNSP
QQYKNHDVDKYNEDHSKFESHSPRHEPPGTTVDNLHIGDNENHKQQQVPLLPQQQQQQQQ
QQQQQQQQPPPHHQHQQQQQQLHKNSGMSPQPQDVRADGYGGRGRGGRGRGRGIGRGHNR
ERDQHRYNDERVGHNYQDNRSIGRGNRGHQQRIPQQHTTHAPRDVEEITAELKNVTLSLH
SREESYWGRNRGGSGNVDNRRNIVPPRLQDTAAAAANMQGRGNRGGNASPGGDGSSSRPK
RYSSQRQRSIPEQQVPPFPQQHGFMDPSVETGYEAGVNDGGIVTPTSHTVTAPHTQHPLA
AGAPPSFVPPAFTSPPTYPPEPFLGRPPAPRMFPPVTQSPHIFGPPVAPPVPGPPVAGPP
PVAGPLGAPPVGAPPVPGPPVTGPPFLPPENMINYGAHPGPHPGPLPGAAPHPPQFPPFQ
GYTPGPVSQPGEIYSNGVTYYNTESQQHLPRSNPRLQKRPKAAIPIVPPPERENKREEGT
ITQEEASEEVIVECEMQDYEHLPSSNVESSLQCDPNEGQLQSEDSFSNDIVNQSQQPLQQ
DTQEQECKDLLQKDITPCDSHPQQDTNNETTTSTISDHISDQVISSDNNDESPKEPSVES
LPPEQNKQNKEVVESDQVSDTAVAAS
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaaccaagggaccagtcaaacagtataacatggcggacaggaggaggcggagg
aagctgggtactgacgatgattctgatgactctgacgacgaacaacctgccccacggaag
actgttaatggaagtgatggaggtgacagtgaatatgaaagtgctgatgaggaagagctt
ggggaagaggaggaggaggaagaagatgagcttattattatgccagatggggtagtctta
ggggaggacaataaacaattagatgatgatgaagatcgaaaaaaccctcagtatatcccg
aaaaaagggacattttatgagcatgatgaccgtactgctgccgaggacgatgtagaaaaa
cctgcagaagaaccagtaattaaaaaggaagttgggaagaagaaagtgtggaaggaagat
gataaatggaaccatgataagttcgatgagtttgaacaagctcccaagtcccgtgaagaa
ttgatttcaatatatggttatgatattcgtaatgaagaaggtccgccaagggctcggcgt
agaagacgatatggacgtggtcctaataagtacacacgcaattgggaggatttagatgcc
tacgccaaacctgtccgtggggctgtccgtggaggtcctggaagaggtggttctagatct
ttgactggcagcaggaaaactctagataatgatgaagaattccctgcactcaattctcct
cagcaatataaaaaccatgatgtcgacaaatataatgaagatcacagcaagtttgaatct
cattcacctagacatgaaccacctggaacaactgtcgacaatctgcatattggtgacaat
gaaaatcataaacagcagcaagtaccgctgcttccacagcagcagcagcagcaacaacag
caacaacagcagcagcagcagcaacctccaccgcaccatcaacatcagcaacaacaacaa
cagctgcacaagaattctggcatgagtccccaaccccaagatgtacgtgctgatggttat
ggtggacgtggcagaggtggcagaggacgtggaagaggtattggccgaggccataataga
gaacgagatcaacatagatataacgatgaacgagtaggccacaactatcaagacaatcga
tcaattgggcgtggtaaccgaggacaccaacaaaggatacctcagcaacatactactcat
gcccccagagacgtagaagagataacggcagagttgaagaatgttactctcagtttgcac
agccgagaagagagctactgggggagaaatcgtggcggaagtggaaacgtggataacagg
cggaacatagtgcctcctaggctacaagatacggcagctgctgcagctaatatgcaaggt
cgaggcaatcgtggtggtaatgcatccccaggaggagatggctcttcttctcgacctaaa
agatactcatctcagagacaacgctccatcccagaacagcaggttcctcccttcccacag
cagcatggctttatggatccatctgtagagacaggttatgaggcaggagttaatgatgga
gggattgtaacaccaacaagccatacagtgacagctcctcacactcagcatcccttagct
gcgggtgctcctccatcctttgttcctcctgccttcacttcccctccaacttacccgccg
gagcctttcttaggaagacctcctgcgcctcgcatgttcccaccggtcacacagtcaccg
cacatcttcggtcccccagttgcgccacctgttcctggaccgcctgtagccggtccccct
ccagtggcaggccctctaggtgctcctccggtgggtgcacccccagtccctggtcctcca
gttactggtccaccattcttaccccctgagaacatgattaattatggagctcatcctggt
cctcaccctgggcccctcccaggagctgctcctcacccacctcagtttccaccattccag
ggttacactcctggccctgtgtcacagcccggggagatctacagcaatggtgtgacgtat
tacaacacagagagtcagcagcacttaccaagaagtaatccacgactacagaaaaggcca
aaggcagcaattccgatagtgcctcctcctgagcgggagaataagagggaagaaggaact
attacccaagaggaagcttcagaggaagttatagtagagtgtgagatgcaagattacgaa
cacttaccttctagtaatgttgaatcttctcttcagtgtgatcccaatgaaggacagctc
caatctgaagattctttcagtaatgacattgtaaatcaatcccaacagcctttgcaacaa
gatacacaagaacaggaatgcaaggatttattgcagaaggatatcactccctgtgactct
catccacagcaggacactaataatgagaccaccacaagcactatatctgaccatatatct
gaccaagtaatttcatctgacaataatgatgaatcacccaaggagccatcagttgaatct
ttaccacctgagcaaaataaacaaaataaagaagtagtagaatcagatcaggtttctgac
acagcagtagcagcttcataa
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