Homarus americanus (American lobster): 121854204
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Entry
121854204 CDS
T07477
Name
(RefSeq) THO complex subunit 6 homolog isoform X1
KO
K13175
THO complex subunit 6
Organism
hame
Homarus americanus (American lobster)
Pathway
hame03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121854204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hame03019
]
121854204
03041 Spliceosome [BR:
hame03041
]
121854204
Messenger RNA biogenesis [BR:
hame03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
121854204
Spliceosome [BR:
hame03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
121854204
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
NBCH_WD40
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_WDR75_1st
VID27
Beta-prop_LRRK2
PQQ_2
Motif
Other DBs
NCBI-GeneID:
121854204
NCBI-ProteinID:
XP_042204636
LinkDB
All DBs
Position
Unknown
AA seq
337 aa
AA seq
DB search
MVLSALKNLYTTTFSQASSPESAILAVGNNDGKIAVFDLSGVNASRETSVGERLGGPCRI
INAHSDAVYSMVSTDAFCISGTTGLVTGRRWDELQQQQSQAAWTISLECDQANFGTPEVN
SLAYDPGRGLVYAACGDWRTHVFDLETGKCTQTLEGHDDYVHDVVTSGNLVASSGEDGQV
LVWDPRAGREPRHKLAPHTHDQLARPHLGRFISSLDLYNDWLVCGGGPRVGIFHLRSLAL
TTVLPSAKSAIHATKFTRHAEGGDRGGIVIAGVLPHLCVCSMAGVVTAQLPSSSPCIYTV
NVTDKPFTMMTYGGTSTKIDVCFNLNYRDHTVSLLED
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggtcttaagtgcattaaagaacctctacaccaccacatttagccaagccagttcccct
gagtcggctatactggctgttggaaataatgatggaaaaattgctgtttttgatttatca
ggtgttaatgctagtcgagaaacaagtgttggtgaacggctgggaggaccatgcaggata
attaatgctcatagtgatgcagtatactccatggtgtctacagatgctttctgcatttca
ggaaccacaggtttagtgacaggtcgtcgatgggatgaattgcagcagcaacagtcccag
gcagcatggacaatatctttggagtgtgatcaagccaattttgggacccctgaggtaaac
agtctagcatatgatcctggaaggggtcttgtatatgcagcctgtggtgattggcgcact
catgtgtttgatctagaaactggtaaatgtacacagacactggaaggacatgatgactat
gtacatgatgtggttacaagtggtaacttggttgccagtagtggtgaggatggtcaggtg
ctggtgtgggatcctcgggcaggaagggagcctcgacacaaattggcaccccacacccat
gatcagctagctagaccacatcttggcagattcatatcatctcttgatctctacaatgac
tggctggtatgtggaggaggaccacgagtgggaatatttcatttgagatccctggcttta
acaacagttttgccctctgccaagtcagccatccatgccactaaattcacaagacatgca
gaaggtggtgatcgaggtggaatagtgatagcaggtgtattacctcacctgtgtgtgtgc
agcatggctggagtagtgacagctcagcttccatcttcttctccatgtatatacacagtt
aatgtgactgacaagcctttcacgatgatgacatatggtggaacaagcacaaaaattgat
gtctgcttcaatctaaattatcgtgatcacacagtatctctgcttgaagattaa
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