Homarus americanus (American lobster): 121854222
Help
Entry
121854222 CDS
T07477
Name
(RefSeq) LOW QUALITY PROTEIN: cadherin-related tumor suppressor-like
KO
K16669
protocadherin Fat 4
Organism
hame
Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hame04515
]
121854222
Cell adhesion molecules [BR:
hame04515
]
Cadherins
Cadherin related
121854222
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Cadherin_CELSR2_9th
EGF
Cadherin_pro
EGF_TEN
Laminin_G_3
hEGF
Cadherin_4
CADH_Y-type_LIR
EGF_2
Motif
Other DBs
NCBI-GeneID:
121854222
NCBI-ProteinID:
XP_042204663
LinkDB
All DBs
Position
Unknown
AA seq
3230 aa
AA seq
DB search
MSSPGSMKVRVSVQDKNDSPPSFGESPRFTVSEDMLAGRQIAVLRASDPDTIGTLTYSLV
DGDDNKFTLDAASGHLSLQDTLDRETKSEYQLTVRADDGEQHTDTTLYIEVTDTNDNPPV
FHEPAYSFDIPEDADRGSQVGQVSAWDADEGTNGQVSYTVISDWGNDVFSLNPQTGXTSR
LDYEQVQHYILVVQAQDTGRPSLSSTVTVYFNVQDLNDNAPIFDPMSYSDEVLENITVGS
SVLSVSATDQDSGANGRLVYSISGGDEKGQFSISENGTIFTKAPLDREDQSFYNLVVRAS
DMALPDHTRLSSTVQVTIILRDVNDMAPEFVTPNETVVEENTPVNTVVMAVKAVDRDEGR
NSYIEYSLAPVPGNRFALGPVDGLLRIAAPLDREDRANYSLVVTARDRGNPPNAHTLTIS
LRIADENDNSPIFDPKQYSASVPENASIGLSVLQVSATDADEGLNGRVRYTIVAGDKNRD
FSIRXDTGVIRVAKNLNYERRNHYLLTVQAEDSGADVRYDSATVTISIMDINDNXPVFLD
SPYLVYVMENMAALPAPIATVTAFDADNPPYNRVNYLVKEGDKSVFSVNATSGQISXLRA
LDREERSHYTLTVVAMDTGTPRLTGTGTISVLVQDENDHAPRFDKDQYEAAVSESVDPDT
QVIAVAATDRDAGANAKIRYSLVEGAAGVFVVEEWTGIIRTVAKLDRESVGQYLLVLGAQ
DSSLTEPRSATTQVRVTVLDENDNAPTFSQGQYLIHVPDPMAPGNFVFGGEALDPDEGVN
GRVTYYLSGNDADKFYMNQETGVIKASTALAGEGEYQLEVLATDSGDTPLSTTARLQVYL
QPDNLFPVFEPLEKTFSFSEAARGDLVTTLTATSPKAGPSGTVRFSIAGGNVGQAFTVDD
KTGELRISQYGLDYETASRYEVWVAAEDTDDPPLTSVTQLVVNVTDYNDNAPVFSQAIYN
ASILEAQNPPQLVATVSATDRDSDTNAQVIYQLRRDSPAAEAFTLDAETGQIYTKIQLDR
EEVEVYTLTVEAVDKGTPAQTGTAMVVVTVQDKNDNPPRFTRLFSVNVTENAEVGTFVIQ
VTSSDRDIGENANATYSFTENPGGKFYIDSVSGNVTVARAIDRELNDEYLLKVSAVDGSW
RAETPLTITVQDENDNAPEFEQSYYVFNFPELQRSVAFVGQVTATDRDKQGPNSVISYSL
KFPSDFFSVDPASGEILSKQALQYKHTLKGPSPENQYHLAVVATDNGKPPMSSESSVVIN
VVDANNNPPRFSEDSYFTPVPESSTIGQSIIQLKAIDDRDFGINAEIEYQKVGGNGTDFF
VLEQKTGWITVARQLKGRIDAHFVLLVRALDRGVPPLQDEVLVTLAVTGENKHAPEFTAL
SYQVIVPENEPLGSDIVKLTAKDNDKGPNGFVRYSITSGNEAGKFAINEKTGAVTIMHPL
DYDAVKVYKLNITAHDGAFVPLQSTAIFTVILIDINDNPPRFSQQQYDAYIAENANAGTT
VFRLNATDIDSPRNAAIQYTLVGGDGKEFFAVDPDTGVVTSKTVFDYEKKSRYVLDIRAA
NNADSSQWGSTALVVHVTGRNEFFPRFIQSVFQFTVSESAQIGTSVGAIQATDEDKGEDG
MVYYLLVGASNDRGFLIQPTTGVITVARSLDRESQNRVVLTVMAKNAGSIRGNDTDEAQI
TISIQDGNDPPVFSQPLYETRLSEGALVGTLVLTVAAVDSDVQPQNNQFTYSIIGGNLGQ
VFKVDPQSGVIETTAQLDRETIQVYNLTVGAIDNGSPPQTGTTLVRVILVDVNDNGPQFD
PPDIVGYVPENEPAMTSVMTLSATDPDLAPNTQPFTYYIVGGEHREFFTVDQATGEVKTT
RSIDRETTPELTFRIEVEDSGKPKMKSEYPVSIIVLDKNDSPSTPRTVTVKVQTFQGVFP
GGKVADVHPNDADTAGQYSCQILTQDAAIFSIPNACNLHAARVPRDRTYTLSVSGNDGKH
PDVTSKVTLEFESFDNATLDNSLTLRLLNVTAERFLRLYYTPFIDTLLPMFAGGQVRIYS
MLDVDSHTDLTLTVAGSGTNSFLRPAEVTRKLAAEEPSLTQSLQGLQLIVDYNPCSDTPC
KNGGECSHGIHAYGDTEITDSPSFIFTSPLIRHDVSCRCRQGFTGPRCELRQDPCSPNPC
QFGGTCARKGFHFMCTCPPTRQGLQCEFDKTNACDDNPCRNGGSCQTTLEGGFFCLCRPG
YRGNQCELASESCRPNPCLNGGTCVSLKPGYSCSCRINFYGTHCEKSTFSFSELSYMTFP
TLDSTTNDISITFSTNKPDALLVYNYGLQTGGRSDFVAIELRGGQPRFSFGGARTAISRI
QVGRDVADGKWYKLTATRNGRVISLSVATCTHNGETCGECRPGDSSCYSDDTGPTGTLNF
NNEPLYLGGVMTVDPLQERPGQVLADDFIGCIQTASINGRPLNLSGPIQARGISDTCERV
ADVCVGNPCGEGATCLDRWSTHMCRCANGLVAPDCEASLRPASFTRGAYVEFLITEQHRR
RQLLPRLYQQHSRWSREINVHHSRARHPRQVPPPPPKSLSFSFRTRMENGLLLHSATNND
YTLVEIRGGFLQYTSKLGANQPINMTIPDVTVNEGDWHNLTLLAEQSALRLILDGNMVGD
ELDLPFIHDFLDAYLTSLTLGSAPRFSGQLPYTLTGFVGCMSTFSVDGEVQPLNSTGSLL
EAVARGVALVTDCTAADLGTATSTDPLSIGITLVIVFFVLLLVAILVSFIVYRVRRQRRE
RGGVHVKQNGSALLANTSSDSGRSPQDSGYVESAEMTDDVLRSHLSQELATKKYKERDHE
RPQRPDIIEREVMNKSPGVPLRVDESQLQERDTMAGLGHIPDSEAPEHYDLENASSIAPS
DIDIVYHYKGYRDGNVRKYKTNPHVPGYHKHNHRHSPHNFPNTPHRESPRNLMRQSPNPV
APRESPSVLKMQSTPLARLSPSSELSQQTPRILTLQDISGKPLQTALLATSQGPGVKDVM
STSERSLNSPVSHLSQSSGSMHASSQSTKKKKHDSSVSLGLTPEEIERLNTRPRNSSLVS
TLDAVSSSSEDNQRKDKLAELIETNTELLEPPDSSTDESGNDSFTCSEFEYENNYEKVTR
DFGPGNMIFSKLAEVDNENEHDNESAKNYDGFDSFRGSLSTLVASDDDLSNMSSYKPPNG
STFGWDYLLNWGPNFESLVGVFKDIAELPDNTTNGRVSARGTPKPNEEYV
NT seq
9693 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcacctggctcaatgaaggttcgcgtgtcagtgcaggacaagaatgattcccct
ccctccttcggcgagtctcctcggttcacggtctcggaggacatgctagctggccgacag
atagccgtccttcgtgcctcggatccagacactataggcaccctgacctactccctggtg
gacggggatgacaataaattcaccctggatgctgcctctggtcacctcagcctacaggac
acgttagacagagagacgaagagtgaataccagctgacagtgagagctgacgatggggag
cagcatactgatactaccttgtatattgaggtgacggataccaacgacaatcctccggtg
ttccacgagccagcttactccttcgacatcccggaggacgctgacagaggttcccaggtg
ggccaggtgtctgcttgggacgctgacgaaggcaccaacgggcaggtctcgtacaccgtc
atctcggactgggggaacgatgtgttctccctcaacccccagacgggcngaacctcaagg
ctggattacgagcaggtgcagcactacatcctggtggttcaagcgcaggacacggggcgc
ccttcactctcctccaccgtcaccgtctacttcaacgtccaggacctcaacgacaacgcc
cccatcttcgaccccatgagttactccgacgaggtactggagaacatcaccgttggctcc
tctgtactctctgtctcggccactgatcaagattctggtgcgaacggccgcctggtgtac
agcatctcaggcggggacgagaagggtcagtttagcatcagtgagaatggcactatcttc
accaaggcgcccctagaccgggaagaccagagcttctacaatctggtggtaagggcctct
gacatggccctacctgaccacacccgcctctcctctaccgtgcaggtgaccatcatcctg
cgggacgtgaacgacatggcgccggagttcgtgacgcccaacgagactgtggtggaggag
aacactcccgtcaacacggtggtgatggcggtgaaggccgtggaccgggacgagggcagg
aactcctacatagagtactccctcgccccggtccccggtaacaggttcgctctgggccct
gttgacggtctcctcaggatcgcggcgcccctggaccgggaggaccgggccaactactcg
ctggtggtgacggccagggaccgcggcaacccacccaacgcccacaccctcaccatcagc
ctccgcatcgccgacgagaacgacaactcccccatcttcgaccccaaacagtactcggcc
agcgtgccagagaacgcctccatcggcctgtcggtgctgcaggtgtcggccacggacgcc
gacgagggcctcaacggccgagtccgctacaccatcgtcgccggggacaagaaccgcgac
ttctccatcaggnnagacaccggcgtgatccgagtggccaagaacctaaactacgagcgt
cgtaaccactatctcctgacggtgcaggcggaagactcgggcgccgacgtgcgctacgac
tccgccaccgtcaccatctccatcatggacatcaacgacaacngccctgtgttcctcgac
tcgccctacctcgtctacgtcatggagaacatggctgccctgcccgcccccatcgccacc
gtcaccgccttcgacgccgacaaccctccctacaaccgcgtcaactacctggtgaaggag
ggagacaagtcggtgttctccgtcaacgccacctcaggacagatcagcnntctgagggcg
ctggaccgtgaggaacgcagccactacaccctcaccgtcgtcgccatggacactggcacc
ccacgactcacagggacgggcaccatctccgtattggtgcaggatgagaacgaccacgcc
cccaggtttgacaaggaccaatacgaagccgccgtgagtgagtcagtagatcccgacact
caggtaatcgctgtggccgctactgacagagacgcaggtgctaacgctaagatcaggtat
tctctggtggaaggcgcagcaggagtgttcgtggtggaggagtggactggcatcatcagg
acagtagccaagctggaccgtgagagtgtgggacagtacttgttggtactgggggcccaa
gactcttccctcacagaaccccggtcagcaaccacacaggtgagggtgacggtgctggac
gagaacgacaacgctccgaccttctcccaggggcagtacctcatccacgtccctgaccct
atggcgccaggtaacttcgtgtttgggggcgaggctcttgaccctgacgaaggtgtgaac
gggagggtcacctactacctctctggcaacgacgccgacaagttttatatgaaccaggag
acgggagtgatcaaggcgtcgacagccctggcgggggagggagaataccagctggaggtc
ctggccactgactcaggcgacacgcccctctccaccacagccagactccaggtctacctc
caacccgacaacctctttcctgtcttcgagcctctagagaagacattcagcttcagcgag
gcagcgcggggagaccttgtcaccactctgacggccacgtcccccaaggccggaccatca
ggcaccgtgcgcttcagcatcgccggcgggaacgtgggtcaggcgttcacagtggacgac
aagacgggggaactgaggatctctcagtacggccttgactatgagacggcatcacggtac
gaggtgtgggtcgctgctgaagacactgacgaccctcccctcacctccgtcacccaactg
gtggtcaacgtcaccgactacaacgacaacgcccccgtgttctctcaggccatatacaac
gccagcatcctggaggcccagaacccacctcagctggtggccaccgtcagtgccaccgac
agagactctgacaccaacgctcaggtcatctaccagctgagacgagactcaccggcagct
gaggccttcacattggacgctgagacgggccagatctataccaagatccagctggaccgg
gaggaggtggaggtgtacacgttgacggtggaggcggtggacaagggcacgccggcacag
acgggcacagccatggtcgtggtcacagtgcaggacaagaacgataacccgccgcgcttc
acgcggctgttcagcgtcaacgtgacagagaacgcggaggtgggaacatttgttatccag
gtgacgtcaagtgatcgagacatcggagagaacgccaatgccacctacagcttcactgag
aatcctggcggtaaattctacattgactccgtgagtggtaacgtgaccgtggccagagcc
atcgaccgcgagctgaacgacgagtacctcctgaaggtgtccgccgttgacgggtcgtgg
cgggccgagactcccctcaccatcaccgtccaggacgagaacgacaacgccccagagttc
gagcagagttactacgtcttcaacttcccagagctacagcgcagcgtggccttcgtgggt
caggtgacagcaacagaccgggacaaacaaggaccaaacagtgttatatcttattccctc
aagtttccatcagacttcttcagtgttgacccagcaagtggagagatcttgtctaaacaa
gcgctccagtacaagcacacgctcaaggggccatcacctgagaaccaataccacctggct
gttgtggccaccgacaacgggaagccgcccatgtcctctgagagctcggtggtgatcaac
gtggtggacgccaacaacaacccgcccaggttctcggaagacagctactttacccccgtc
cctgagagctccaccataggtcagtctatcatccagttaaaggccattgatgatcgggac
ttcggcatcaacgccgagatcgagtaccagaaggtgggcggtaatggtactgacttcttc
gtgctggagcagaagacgggctggatcaccgtcgcccgtcagctgaagggaagaatagac
gcacacttcgtcctgttggtgcgcgccctagaccgtggcgtccctccactgcaggatgaa
gtcctcgtcaccctggcggtcactggtgagaacaaacacgcgccagagttcacagctctc
agctaccaggtcatagtgcccgagaatgagccgctggggtcagacatcgtcaagctcact
gccaaggacaacgacaaaggccccaacggatttgttcggtactccatcacgagtggtaac
gaggctggcaagtttgccatcaacgaaaaaacaggagcagtgaccatcatgcacccgctg
gactacgacgccgtcaaggtgtacaaactgaacatcacggcccacgacggtgcgtttgtt
cctctacagtcaacagccatattcactgtcatcctcattgacattaatgacaaccctccc
aggttcagtcagcagcagtatgacgcttacatcgcggagaacgccaacgctggtacaaca
gtgttcaggttaaatgcgacggatattgactctcctcgtaacgcggccatccagtacacg
ctggtgggcggcgacgggaaggagttcttcgctgttgacccagacacgggcgtggtcacc
tccaagacggtgtttgactacgagaagaagagtcgctacgtcctggacatcagggctgcc
aataacgctgactcctcacagtggggctccacagcgttggtggtacacgtcacaggacgc
aatgagttcttccctcgcttcatccagtctgtcttccagttcacagtgtcggagtctgca
cagatcggcacgtctgtgggcgccatccaagccactgacgaggataagggagaagacggc
atggtgtactacctcctggtcggcgccagcaacgaccgagggttcctcatccagcccacg
acgggcgtcatcacagtagctcgtagcctcgaccgtgaaagccagaacagagtcgtcctc
acggtgatggccaagaacgccggcagcatccgtggtaacgacactgacgaagcgcagata
actatctccatccaagacgggaacgaccctcccgtgttctctcagccgctgtacgagacg
agactctctgagggcgctctggtgggcaccctcgtcctgaccgtcgctgctgttgactca
gacgttcagccacaaaacaaccagttcacttactccatcatcggcggcaacctgggccag
gtgttcaaggtggacccccagagcggcgtcatagagacaacagctcagctagaccgtgag
accatccaggtgtacaacctgacggtgggcgccatagacaacgggtcgccaccccaaacc
gggaccaccctcgtgcgggtcatactggtcgatgttaacgacaatggacctcagtttgac
ccgcctgatatcgtagggtacgtgccagagaacgagccagcgatgacgtcagtgatgacc
ctgagtgccacagaccccgacctggcacccaacacccagcccttcacctactacatcgtg
ggcggtgaacatcgcgagttcttcaccgtggaccaggcgacgggggaggtcaagaccacc
cgcagtatcgaccgggagacaacacctgaactcaccttccgtatagaggttgaagacagc
ggtaagcccaagatgaagtccgagtaccccgtctcgatcatcgtcctggacaagaacgac
tcaccctcaacaccaaggacggtgacggtgaaggtgcagacgttccagggagtgttcccg
ggaggcaaggtggcggacgttcaccccaacgatgctgacaccgctggccagtactcctgc
cagatcctcacccaagacgccgccatcttttccatccctaacgcctgtaacctgcacgcc
gccagagtcccgcgggaccggacctacaccctcagcgtctcggggaatgacggcaaacat
ccagacgtcacttctaaggtcaccctcgagttcgagtctttcgacaacgccaccctggat
aacagcctcaccctgcggctcctcaacgtcacggccgagcggttccttcgcctgtattac
acacctttcatagacaccttgttgccgatgttcgcgggcggacaggtgcgcatctactcc
atgctggacgtcgactctcacactgacctgaccctgactgtggctggctctggcactaac
tctttcctccgaccagccgaggtgactcgtaaactggcagccgaagagccgagtctgact
cagtcccttcagggcctgcagctcatagttgactataacccctgcagtgacacaccttgt
aagaatggcggagaatgttcacacggcatccatgcttatggtgacacggagatcaccgac
tccccgagcttcatcttcacctcacctctcatccgccatgacgtgtcgtgcaggtgtcgc
cagggctttacggggcccaggtgtgagctgcgtcaggacccctgttcacccaacccctgc
cagtttggtggcacgtgcgccaggaaaggtttccacttcatgtgcacgtgtccgcccacc
cgccaggggctgcagtgtgagtttgataagaccaacgcctgtgatgacaacccgtgccgt
aatggcgggtcgtgtcagacgacgctggagggagggttcttctgcctgtgtcgccccggc
taccgcggcaaccagtgtgagttagctagtgagtcgtgccgccccaacccttgcctcaac
ggcggcacctgcgtctccctcaagcccggttatagctgctcctgcaggatcaacttctac
ggaacccactgtgagaagtctaccttcagcttcagtgagttgtcgtacatgaccttccca
accctcgactccaccaccaacgacatctccatcaccttctccaccaacaagccagatgcg
ctcctcgtgtacaactacggcctacagacgggcgggcgctcagacttcgtggccatcgag
ctgaggggcggacaacctcgctttagtttcggcggggcgcggacggccatctccaggatc
caggtggggcgtgacgtggcggacggcaagtggtacaagctgacggcgacacgtaacggc
cgcgtcatctccctcagcgtggccacctgcacccacaacggcgagacctgtggcgagtgt
cgtcctggcgactcctcctgttacagcgacgacacaggtcctactgggaccctcaacttc
aacaacgagccactgtacctgggcggagtgatgacggtggaccccctgcaggagcggccc
ggccaggtcctcgctgacgacttcatcggctgtatccagaccgcctccatcaacggcaga
cctctcaacctctctggccccatacaggcccgaggtatatctgacacgtgtgagcgggtg
gctgacgtgtgtgttggtaacccgtgtggtgagggtgccacctgcctggaccgctggtcg
acacacatgtgccgctgtgccaacggactggtggctcctgactgtgaggcttccctacgc
cccgcctccttcacccgcggcgcctacgtcgagttcctcatcacggagcaacaccggcga
cgtcagctgttgccgcgcctctaccagcaacactccaggtggtcacgggagatcaacgtc
caccacagccgcgcccgacacccacgccaggttcctccgcctcctcccaagagcctctcc
ttcagtttccggacgcggatggagaacggcctcttgctgcactccgccaccaacaatgac
tacactctggtggagattcgtggcgggttcctacagtacacgtccaaactgggtgccaac
cagcccatcaacatgaccatccctgacgtgactgtcaacgagggagactggcacaacctg
acgctgttggcggaacagtcggccctcagactcatactggacgggaacatggtcggggac
gagctggacctgcccttcatccatgacttcctcgacgcctacctcacctccctcacgctg
ggctctgcgcctcgcttctccggccagctgccctacaccctcacagggttcgtggggtgt
atgtccaccttcagtgtggacggggaggtgcagccactcaactcgacggggtcgctgctg
gaggctgtcgctcgcggggtggcgctcgtcacagactgcacagcggcagacctgggtaca
gccacctccacagaccctctgtccatcggcatcaccctcgtcatcgtcttcttcgtactc
ctcctcgtcgccatcctggtgtccttcatcgtctaccgagtcaggcgccagcgacgagag
agaggcggtgtgcacgtcaagcagaacgggtctgctctcctcgccaacacctcctctgat
tccgggaggtcaccgcaggactccggctacgtggagagtgcggagatgacggacgacgtt
ctccgctcacacctctctcaggagctggcgacgaagaagtacaaggagcgtgatcacgag
cggcctcagagacctgatataatcgagcgggaggtgatgaacaagtcgccgggtgtcccc
ctcagggtggacgagtcacagctgcaggagcgggacaccatggctggcctgggccacata
cccgactcagaggcccctgaacactacgacctggagaacgcctcgtccatcgcgccctcc
gacatcgacatagtgtaccactataagggttacagagacggcaatgtgcggaagtataag
acaaaccctcacgtgccgggctaccacaagcacaaccaccgccactccccgcacaacttc
cccaacacaccgcaccgcgagagtccccgcaacctgatgcggcagagtcctaaccctgtg
gcgccgcgggagtcgccctctgtactcaagatgcagtctacacctcttgctcgcctctcc
ccctcctcagaactgtcgcagcagacgccgcgtattctcacattgcaggacattagcggc
aaacccctgcagacagctctccttgccacctcacaagggccaggtgtgaaggacgtcatg
tccactagtgagagatcactcaattcacctgtgtcacacctgtctcagtcgtctgggtct
atgcacgcatcgtcacagtcgacgaagaagaagaaacacgacagcagcgtgagtctgggc
ctcacgccggaggagatcgagcgtctcaacacgaggccgcgcaactcctcgctggtgtct
acgttagacgctgtgtcttcctccagtgaggacaaccaacgcaaagacaaactggcagaa
ctcatcgagaccaacacagagctgctggagcctccagactcctccaccgacgagtcaggc
aatgattccttcacttgttcagagtttgagtacgagaacaattacgagaaggttacccgc
gactttggtcctggcaacatgatcttcagcaagttagcggaggtagacaacgagaacgag
cacgacaacgagtctgccaagaattacgacggctttgattcttttcgaggctcgctcagc
acactggtggcgtcagacgacgacctgagcaacatgagctcctacaagccacccaacggc
tccacgttcggctgggactatctgctcaactggggtcccaatttcgagagcctagtgggc
gtgttcaaggacatagccgaactaccggacaacaccaccaacgggcgggtgagcgctcgg
ggcacacccaaacccaacgaggagtacgtatag
DBGET
integrated database retrieval system
