KEGG   Homarus americanus (American lobster): 121854242
Entry
121854242         CDS       T07477                                 
Name
(RefSeq) aprataxin and PNK-like factor isoform X1
  KO
K13295  aprataxin and PNK-like factor [EC:3.1.-.-]
Organism
hame  Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:hame00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hame03400]
    121854242
DNA repair and recombination proteins [BR:hame03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     121854242
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     121854242
SSDB
Motif
Pfam: zf-CCHH FHA
Other DBs
NCBI-GeneID: 121854242
NCBI-ProteinID: XP_042204696
LinkDB
Position
Unknown
AA seq 621 aa
MLAGRIKTLIDSLSTLVARMSISLIRVKGPSEDEFVEQHSNQEIPISPPVVLGRGSLLKC
GEKRVSRRHAYLDWDDDGVLITSVHQSPTYIMVSGEKEKLTEGSSKLLAHGDKFGLMKTN
FWFKINIPSATLKGNEKKEAEILHNEEISCKEPTQTGKKMKKDNDSTADKNVKNNMYQSR
ERDVDSDSVQNSGTQGVPSEQEKTENSHNNLDPKEEDTSLKMKKPVTENIAQDHPSCNEG
EVAYSKVTPEEIEAAVSTRKRDLPTWMVNCDVSKDKGCPREDTYLLTRGGRQKTCSTPSR
RKRADDSNLSVASQTNKNTTHINHLSTSPATRGSSKLNDVEGTTKNKNFETNCVTPKKKK
NKLSQGKGVGSPKKAVSPRKLGTRIHHDISEESNDDLPITVTTVREKKKNSPDKTNQIPA
KNHSSNSPSKAHDVSEDEEDNLIDESTNSSFSAEANSSAPPTTSTVAETAVPKRKKAPRK
SCQYGGKCYRKNQKHREDFAHEGDSDYNKNLSDPEDSDDELPQCEFGVNCYRRNSRHRRD
FRHSRVPQPQRRVKRKARQQQYEGGSESDDYDYDDPFLNEGSSDDYAPTDSGSDSAMEAE
QGEEEDTTRMLKEAKKFVRKK
NT seq 1866 nt   +upstreamnt  +downstreamnt
atgttggcaggcagaataaagacactcattgatagtcttagtactttagtcgccaggatg
agtatttcattaattcgggtgaaaggccccagtgaggacgagtttgtagaacagcacagc
aatcaggagatacctatatctccaccagttgtcttgggaagaggatctctgttgaagtgt
ggtgaaaaaagagtgtctcgaagacatgcttacctggactgggatgatgatggggttctc
attacttcggttcatcaaagcccaacctacattatggttagtggtgagaaagaaaagtta
actgaaggaagttctaagcttcttgcacatggagacaaatttggcttaatgaagactaat
ttctggttcaaaattaacataccaagtgctactcttaaaggtaatgaaaagaaagaagct
gaaatcttacacaatgaggaaatttcttgtaaagaaccaacacaaaccggaaagaaaatg
aaaaaggacaatgattcaacagctgataaaaatgtaaagaataatatgtaccagtccaga
gaaagggatgtagacagtgactctgttcagaattctggcactcaaggtgtcccatctgag
caggaaaagacagaaaactctcataacaatcttgatccaaaggaggaagatacatcactt
aagatgaagaaacctgtgactgagaacatagctcaagaccatccctcttgtaatgaaggt
gaagttgcttattctaaagtcacaccagaggaaatagaagcagctgtatctacaaggaag
cgagatttgcccacatggatggttaattgtgatgtgtctaaagacaagggatgcccaaga
gaagacacatacttactcactcgtggtggcagacagaagacttgttcaactccttcaaga
agaaaaagagctgatgacagtaatctatctgtggcatctcaaacaaacaaaaatactaca
catattaaccatctgtcaaccagtccagccacaagaggatcttctaaattaaatgatgtt
gaaggaacaacaaaaaacaagaattttgaaaccaattgtgttacaccaaagaaaaagaaa
aacaaattgagccaagggaagggagtgggttcacccaaaaaagctgtttctccaaggaaa
cttgggaccagaattcaccacgatataagtgaggagagtaatgatgatttacccatcact
gttactactgttcgggaaaaaaaaaaaaatagtccagataaaaccaaccagataccagct
aaaaaccacagcagtaattccccaagtaaagcccatgatgtgagtgaagatgaggaggac
aacttgattgatgagtcaactaatagttcatttagtgcagaggccaattcatcagctcca
cccactacatctactgtagcagaaacagctgttcccaagagaaaaaaagctcccagaaaa
tcctgccagtatggaggcaaatgttataggaaaaatcagaaacatcgagaagattttgcc
catgaaggagattcagactacaataagaacctctctgacccagaagactctgatgatgaa
ctgcctcagtgtgaatttggtgtaaattgttatcggaggaattctcggcaccgtagagac
tttcgccacagtagggtccctcagccgcaacgtcgagtgaaaagaaaagcacggcaacag
cagtacgagggagggagtgaatccgatgactatgattatgacgatccattcttaaatgag
ggcagttcagatgactacgcaccaacagactctggctcagactctgccatggaagctgag
caaggggaggaggaagacactacaagaatgttgaaagaagccaaaaagtttgtgaggaag
aaataa

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