Homarus americanus (American lobster): 121855239
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Entry
121855239 CDS
T07477
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A-like isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
hame
Homarus americanus (American lobster)
Pathway
hame03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121855239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hame03041
]
121855239
Spliceosome [BR:
hame03041
]
Complex A
U1 snRNP components
U1 related factors
121855239
Complex B
121855239
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
RhoGAP-FF1
DTW
WW_2
Motif
Other DBs
NCBI-GeneID:
121855239
NCBI-ProteinID:
XP_042206057
LinkDB
All DBs
Position
Unknown
AA seq
919 aa
AA seq
DB search
MSGGGPPGGNVPPGYGAPPMGFRMPPPGPGMPPRLPPPGFIPPGAPPGLPPPAFNVPPPG
FMSSFGQAPSGEGSGAVISAGPQLNTPPASNSPAAIQVVSPATTPGPATSASPSPANIAM
PGTPSPALPTSAPSAPPVKPEAGSPTKDKKSVWTEHKAPDGRVYFYNTLTRQSSWEKPDE
LKTSAELLLSQCPWKEYKSESGKTYYHNVNTKESRWTVPKELEDLKTKISSEENASKTST
KSVPQDKKPTSAMDQAMAATLAAIQVPASNKAPEKKSGPQEKEELGKPAVLAMTEQTAVT
APSSSREGMLRLSGMQTGSSGVKRVDSAGVEVVKEVTEPKQLVFKDKKEALEAFKEFLRD
KGVPSDATWDKAVRMIQNDARYEAFNKLNEKKQAFNAYKVQRAKEEKEEQRLRAKKAKED
LEHFLLNSERMSSSIKYYRCHEMFQHLELWKTVPESERREVYEDVVFNLAKKEKEENKAM
RKRNMKVLSEILDSMTNITFKTTWSEAQQMLIDNPTFAEDTDLLSMDKEDALIVFAEHIK
QLEEEEEEERERQKKRVKRQQRKCRDNYIALLDELHEQGKLTSMSLWVELYPMISADIRF
TAMLGQPGSTPLDLFKFYVADLKSRFHDEKKIIKEILKEKSFEVQVKTSFKEFATVVCDD
PRSATLDAGNVKLTYNALIEKAEAREKERQKEEARKMRRLEAGLRAAFKSIGVDSGSTWE
DVRPRVQHLSSFTAVTIEAERIRIFKEYQQHLEEACGHHHSRNKKKSKKKDRKKSRSRSH
SYSSDSDEGHHKRRSRRSRSRSKSYSDDSEEERRRSRKKKSKKKKGRSRSRSVSSEDSYR
SRRSSKKKKHRSRSRSRSRSRGGSYRSSHVRSRGHSEGDSGRRSSEREAGEVSLEEGELS
EDELEKKREQLMKELENIN
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaggaggaccaccaggtgggaatgtccctccaggttatggtgctccccctatg
gggttcagaatgcctcccccgggcccaggtatgcctcctcgtctgccaccgccgggtttc
atcccccctggagcaccgccgggattaccaccaccggcgttcaatgttccgcctcctggt
tttatgagctcctttggtcaggctccttcaggtgaaggtagtggtgcagtgatctctgct
ggtcctcagctcaatactcctccagccagcaattctcctgctgccattcaagtagtatct
ccagcgaccactccaggcccagccacttcagcaagtccctcacctgccaacatagccatg
cctggtaccccatctcctgccctgcctacctccgcccccagtgcccctccagtcaagcct
gaggctggttcaccgaccaaggacaagaagagtgtgtggacagaacacaaggctccagat
ggaagggtttatttctacaatacactgaccagacaatcgtcctgggagaaacctgatgaa
cttaaaacatcggctgagttgttactgtctcagtgtccctggaaagagtacaagtcagaa
agtggaaagacttattaccacaatgttaacacaaaggagtcacgctggacagttcccaaa
gagctggaggacctcaaaacaaaaatttcctctgaagaaaatgcgagtaaaacaagtact
aaaagtgtcccacaggacaaaaaaccaacctctgctatggaccaagccatggcagccact
ctcgctgccatccaagttcctgcctcaaataaagccccagagaagaagtccggcccacag
gaaaaagaagagcttggtaaacctgctgttttagccatgacagagcagaccgcagtaacg
gccccaagttcttcccgggaagggatgctaaggctctccgggatgcagaccggctcctcc
ggcgtaaagagggtggactctgccggagtggaagtagtgaaggaagtgacagaacccaag
cagctggtgtttaaggacaagaaggaagcattagaagcattcaaggagtttctccgtgac
aagggtgttcccagtgatgctacttgggacaaagccgtccgtatgatacagaatgatgca
cgatatgaagccttcaacaagctcaatgagaagaaacaagccttcaatgcttacaaagtc
cagcgtgccaaggaagagaaggaggagcagcgacttagagccaagaaagccaaggaggac
ctggaacatttcctcttgaatagtgaacgcatgagctcctccatcaagtactaccgatgc
cacgagatgtttcagcacctcgagctgtggaagaccgtgccggagtcggagcgccgggag
gtgtacgaggatgtggtgttcaaccttgccaaaaaggagaaggaggaaaacaaagcaatg
aggaagaggaacatgaaggtgctgagtgagatattagacagcatgaccaatattaccttc
aagaccacctggtcagaggcacaacagatgctcatagacaacccaacttttgctgaggac
acagacctgctgagtatggataaggaggatgccctcattgtttttgctgagcacatcaaa
caacttgaagaagaagaagaggaggagcgtgagcggcagaagaagagggtgaagcggcaa
cagaggaagtgtcgtgacaactatatagctctgttagatgagctgcatgaacagggcaaa
ctgacatccatgtcattatgggtagaactgtatccaatgatctctgcagacatcagattc
acggccatgttaggtcagccaggatcaacgcctcttgacttgtttaaattttatgtggcc
gatctcaagtctcgcttccatgatgaaaagaaaattattaaggaaattttgaaagagaag
tcattcgaggtccaggtcaagacgagcttcaaagaatttgccacagtggtgtgtgacgac
cctcgttcggcgacgctggatgctggtaacgtcaagctaacgtacaacgctcttatagag
aaggctgaagcaagggagaaagaaagacaaaaggaggaagctcgtaagatgcgtcggctg
gaggccggtctacgcgctgcctttaagtccatcggtgttgactccggctccacctgggaa
gatgtacgtcctcgggtacagcacctttcatccttcactgccgtcaccatagaggcagag
cgcatcagaatattcaaggagtatcaacagcacctggaggaagcgtgcggccatcaccac
tcccgcaataagaagaaaagcaaaaagaaagacagaaagaaatcccgatcgcgctctcac
tcgtactcgtctgacagtgacgagggtcaccacaagcgcaggtcacgacgctctcgctcc
cgctcaaagagttactctgatgactctgaggaggaacgccgccgctctcgtaagaaaaag
agcaagaagaagaaggggcggagccgctcgagatcagtcagcagtgaagactcctacaga
tcacggcgctccagcaagaaaaagaagcatcgttctcggtcacggtctcgctccaggtca
cgtgggggctcatacagaagttcccatgtgcgatcccgaggccattctgaaggcgattct
ggtcggaggtcatcagaacgtgaggctggcgaggtcagcttagaggagggagagctgagc
gaagatgagttggaaaagaagagagaacagttaatgaaagaactggagaacatcaactaa
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