Homarus americanus (American lobster): 121855399
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Entry
121855399 CDS
T07477
Name
(RefSeq) Fanconi anemia group J protein homolog
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
hame
Homarus americanus (American lobster)
Pathway
hame03440
Homologous recombination
hame03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121855399
03460 Fanconi anemia pathway
121855399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hame03400
]
121855399
Enzymes [BR:
hame01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
121855399
DNA repair and recombination proteins [BR:
hame03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
121855399
FA (Fanconi anemia) pathway
Downstream FA components
121855399
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
121855399
NCBI-ProteinID:
XP_042206235
LinkDB
All DBs
Position
Unknown
AA seq
1280 aa
AA seq
DB search
MLIVFFCLCVVTEKARRYNNLIEQGITDPDILNRAAGGSILDNTPETDLLYGRLQPPWLS
EQYSYTSDPSAATPAASATPAASATPAASATPAASAAPGPSNPSATAEAAAFGGGFLQDD
DFQPSNQQFPYQNAGWDTAAMSSVNQEEIRPWETTESAARPPWMKVPKIFFGTRTHKQVH
QIVKELRRTDYTDVRSVVLASREHMCIHPTVSKLNNKNEECRKLLDPHLRVEIDSRKDEK
KHKQIIIPGTGCRYHHGSQKIKNYDHLAEHGVDSVLDIEDLVKFGKRVHACPYYTSRTLL
TTAELVICPYNYLIDPLIRQSMDIVLTNQIIVLDEAHNIEDSAREAASCTVPQGDMLEAS
LDLQSLAKKEINPSECTVLFQMLDALCGWVNQNSDKLTDYTDYDRSGKIFKGTEMIAHLE
LLGIGCSNFKKFKHCLSVLTVDKAPDELVIIPSINSATTSLLKNLFLMFHYLFMDNMKYG
DDYRVALVKEQSRKNSTPNADGWFGKGESCVGWKYSINFWCLNPAVTFSAFGGIVRSIIL
TSGTLSPMSTFQSELGIPFKIQLEANHVIDKSQVWVGTIGKGPTEHSLQATYRHTESFTF
QDELGKLILDVCKTVPRGILCFLPSYAMLNKLVNRWKNVGLWHELQKVKVCLTEPRNSEE
FEKIMQIFYSTIEETRLETSGVTGAAFLAVCRGKVSEGLDFTDDNARAVIAVGIPYPNVK
NIQVDLKRQYNNQHCQTRGLLTGDAWYEIQAYRAINQALGRCIRHRYDWGALILVDERYQ
RGSLESGLQENKYTRGLSKWVRNKIVHSPSFSVAISNLQHFTENMIAHPPVNPERLDETV
AFAMDVEMVKPAETSSCVSVDCSNSKMQNKMNESSDVLFRGLKSSPLHSNSKLPNLALDN
ISTEVNRKSNMRVDPQGNNESCLYTGISASIVSKPHGNFIDLNKEGDILIPSGKLPFTST
QITSSREVVPPQMVSNTSHKKYLKTKSNYFFNALTLTDNNLALKSNCVEKIAEVQPTNLD
PPCKKRKSYSAKAKKSKTGENDEKNLKKVETSRSSNDSTYIFEYIDENVKSNVSPLKVLL
ENEMKEKIPLKHTIHSNKTMEKIQSSGTKISGARKSLAFETIDQCEGEVSINHEEPSSLP
MFDLYENQHSGDSPFNPSQNIHSTETRQKELSMVKGNCDETIEKTSSCSTGGDVRTTGNL
PHKLESPGSKRVKELCNTKKRPKSNRRISSFDSIISEDDSDLDDFNMSTSFSSIGDHQTL
RDKQSTSMLKGVQYIEYDSD
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atgttgatagtatttttttgtctttgtgttgttacagagaaggcgaggcgatataacaac
ctcatcgaacagggcataactgatccagacatattgaaccgggcagcaggagggagtatc
ctggacaacaccccggagaccgacctactctatgggagactgcagccaccgtggttatct
gaacagtactcgtacacctctgatccttctgctgccacccctgctgcctctgccacccct
gctgcctctgccacccctgctgcttctgccacccctgctgcttctgccgcccctggaccg
tccaatccctccgccactgctgaagctgcggcttttggtggtggcttcttgcaggatgat
gatttccagccatccaaccagcagttcccttatcaaaacgctgggtgggacacggcagct
atgtcctcagtcaaccaggaggaaattaggccatgggagactactgaatcagccgcaagg
ccgccctggatgaaggtgcccaaaatcttcttcggcacaaggacccacaaacaggttcat
cagatcgtcaaggagctgcgacgcacagactacaccgatgtcaggtctgtggtgctggct
tcccgggaacatatgtgcatccaccccactgtcagcaaattaaataacaaaaacgaggag
tgtcgtaagctgctggatcctcatttgagagtcgagattgacagcaggaaagatgaaaaa
aaacacaagcaaatcatcataccgggcactggatgtaggtatcatcatggttcccaaaag
ataaaaaactatgaccacttggcagagcatggtgtggattctgtattggatattgaagac
ttggtcaaatttggtaagagggtccatgcttgcccctattatacctccaggacactttta
acaacagcagaattagtcatctgtccatataactacctcattgatccactcattagacag
tcgatggacatcgtcctgacaaaccaaattattgtgctggatgaagctcacaacattgag
gacagtgccagagaggcagcctcatgcacggttccccagggtgatatgcttgaggccagt
cttgatcttcagagtttagcaaagaaagaaatcaatccgtctgaatgtactgtattgttt
cagatgttggatgctttatgtggatgggtgaaccaaaactctgacaaactcacagactat
acagactatgatcgttcaggcaaaattttcaaaggcacagaaatgattgcacaccttgaa
cttcttggaattggatgcagcaattttaagaaatttaagcattgcctatccgttctgact
gttgacaaagcaccagacgagctagtgataattcccagcatcaacagtgcaacaacttca
ctactcaagaacctttttcttatgtttcattacctttttatggataacatgaaatatggc
gatgattatcgggttgctctggtgaaagaacagagtaggaagaacagcactccaaatgca
gatggttggtttggcaaaggggaatcttgtgtaggatggaagtactccattaatttctgg
tgcctcaatcctgctgtaactttctctgcatttggaggtattgtccgctccatcatcctg
acctcaggaactctttcccctatgagcaccttccagtctgaattgggtattccattcaag
atacaactagaagctaatcatgtcattgacaagagccaggtttgggtgggaacaataggt
aaagggccaacagagcacagtttacaggcaacttaccgtcatactgaatcttttacattc
caagatgaattaggaaaacttattcttgatgtttgtaagactgtgcctcgagggatattg
tgctttcttccttcctatgccatgctcaacaaattagttaacagatggaagaacgtgggg
ctctggcatgagttacagaaggtgaaggtgtgtctgactgaaccaaggaatagtgaagag
tttgagaaaatcatgcaaatcttttatagtaccattgaggaaacaagactggagacgagt
ggagtaaccggggccgccttcttggcagtgtgtcggggtaaagtcagtgaaggtttagat
tttactgatgataacgctcgagctgtcatagcggttggcatcccatatccaaatgtgaag
aatattcaggttgacctaaaacgtcagtacaataatcagcattgtcagacacgtggcctt
ctaacaggagatgcttggtatgaaattcaggcatatcgggcgattaatcaagctctagga
agatgcattcgacatcgctatgactggggtgctctgatattagttgatgaacgataccaa
agaggcagtcttgaaagtggattgcaagaaaataagtatacccgtggcttgtccaagtgg
gtgaggaataaaattgttcactcccccagtttctccgtggctatctcaaaccttcaacat
tttacagaaaatatgattgcacatcctccagtgaacccagaaagacttgatgagacagtg
gcctttgcaatggatgtggagatggtaaaacctgccgaaaccagttcttgtgtttcagtt
gattgcagcaattcaaaaatgcagaacaaaatgaatgaatcttcagatgtacttttccgt
ggtctcaagtcaagtccacttcactcaaattctaaattacctaatcttgcattggataat
atttctactgaagttaacagaaaaagtaacatgagagttgacccacaaggaaataatgaa
tcatgtttatatacagggattagtgcaagtattgtaagtaaaccacatggtaacttcatt
gacttgaataaggaaggagatattttaattccatcaggtaaacttcctttcacatcaact
cagataacaagctcaagagaagtagtgccacctcaaatggtttccaacacctcacataaa
aaatatttgaagacaaagagtaattatttttttaatgccttaactctgactgacaacaat
cttgcattaaaaagcaattgtgttgaaaaaattgcagaggtccaacctacaaatttggac
ccaccatgcaagaagagaaaatcatattcagcaaaagctaaaaaatccaaaacaggtgag
aatgatgagaaaaacttgaaaaaggttgaaacctctaggtcttctaatgacagtacatac
atctttgaatatattgatgaaaatgttaagtctaatgtgtcaccactgaaagtactgctg
gaaaatgaaatgaaagaaaaaatccccttaaagcataccatccatagtaataaaacaatg
gaaaaaattcaaagcagtggtacaaaaatttctggagcaaggaaaagcttagcatttgaa
acaattgatcaatgtgaaggtgaagtatcaattaatcatgaagaacccagctctctgcca
atgtttgatttgtatgaaaatcagcattctggtgattctcctttcaatccttcacagaat
atacactcaactgaaacacgtcaaaaagaactatcaatggtgaaaggcaactgtgatgaa
acaatcgaaaagacaagcagctgttcaactggtggagatgtcagaacaacaggaaatctt
cctcacaaattagagtcacctggaagtaaaagagtcaaagaattatgcaacacaaaaaag
agacccaaatctaacagaaggatatcaagttttgattcaattatttcagaagatgattca
gatctggacgattttaatatgagtacgagcttcagcagcattggagatcatcaaacactt
cgtgataaacaatcaacaagtatgctcaaaggtgtccagtatattgagtatgatagtgat
tga
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integrated database retrieval system
