Homarus americanus (American lobster): 121855459
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Entry
121855459 CDS
T07477
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR-like isoform X1
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
hame
Homarus americanus (American lobster)
Pathway
hame04137
Mitophagy - animal
hame04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121855459
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121855459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hame04121
]
121855459
Enzymes [BR:
hame01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
121855459
Ubiquitin system [BR:
hame04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121855459
Multi subunit type E3
ERAD complex
121855459
LMBR1L-GP78-UBAC2 complex
121855459
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
CUE
zf-RING_2
zf-C3HC4_2
G2BR
zf-rbx1
zf-C3HC4
zf-RING_11
zf-C3HC4_3
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
121855459
NCBI-ProteinID:
XP_042206332
LinkDB
All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MPVVLDRLPLPNLTWYTGLSVVLLSCSVYYAGVQVALNPNWKEKLLEKSNASHLDDEGEV
SLYHVSDHDGLSQERQMTPYLIPEVISFMFHEPLCIWTLINMAYCVLILLGTLIQRLVFG
ELRVSEQQHIKDKFWNFVFYKFIFVFGVMNVQAMDEVVLWCSWFSVLGFLHLLAQLCKDR
FEYLSFSATTPRRTHVRLLGLLGIILTIATFCLLICVVVGCHSGINTFAFMVAECILLIV
RTLYVITRYSIYLWDITHEGLWEKRGRCVYMTELIFELSELVIDMVHHIHMLVWGNMLLT
MASLVICMQLRLLFYQLQHKVKSHRNYLRVLQLMNMYPEISGDDILAEESTCAICWEHLE
TGRCLPCSHVFHASCLLAWLHQDLSCPTCRHKLYKPEQNDAGSLSGSLLDGFLPTSEENG
MGQENSVRNVGHGGAGTFPSPAAPEGSPGTAGWRYVSWLPSFSVEQSHTQLPRHHQANSQ
PASTSQLDSLARQVQQMFPDVSYSHILEDLRHTHSLEITIDNILEQRLVNPPPMFTSDES
SSLLFDVKQDKEDNQQIMKHDEDIEEEEEYFQDAESLPLSRLCMEALALTHSSTSDDSSD
TESEGSGYGIGSCGAGSRFSKSPQEREQMLAQRKTALLNQARRRFVTKPRGSNSVDEIEL
LEDGECVENS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtggtactggacagactaccgctgcctaacctgacctggtacacagggctcagt
gtggtgttattgtcgtgttctgtgtattatgctggcgtccaggtagccctcaaccccaac
tggaaggaaaaactcttagagaagagcaatgcttcacacttggatgatgagggtgaagtg
tccctgtatcacgtcagtgatcatgatggactgtcacaagaacgacagatgactccttac
cttattcctgaagtgatcagctttatgtttcacgagccactatgtatatggactctgatc
aacatggcatattgcgttctcatcctgctgggtactttaattcagcgcctagtctttgga
gagttacgtgtgtctgaacagcagcacataaaagacaaattttggaattttgtgttttac
aaattcatctttgtttttggtgtgatgaatgtacaagcaatggatgaagttgtgctctgg
tgttcctggttcagcgtcttgggttttcttcatctcctggcccagctttgtaaagatcgc
tttgaatatttgtcattttctgcaacaacacctcgcagaacacatgtgaggctcctaggg
ctgctgggtattatcctgaccatagccaccttttgtcttctcatatgtgttgtggttggc
tgtcattcaggcattaatacctttgcatttatggttgctgagtgcattctgttgatagta
cgaaccttgtatgtgattacccgctacagtatctacctctgggatatcacacacgaagga
ctttgggaaaaacgagggcgttgtgtgtatatgacagagctgatttttgagctgagtgaa
ctggtaatcgacatggttcatcatatccacatgctggtgtggggcaatatgttactgact
atggcatcacttgtcatatgtatgcagttgagacttcttttttaccagcttcagcacaaa
gtcaagtctcaccgcaactaccttagggtgcttcagcttatgaatatgtacccagagatt
agtggtgatgacatcctagcagaggagagtacgtgtgctatttgctgggagcacttggag
actggccgctgcctcccgtgttcacatgtctttcatgcttcgtgtctgttggcctggcta
caccaagacttgtcttgcccaacatgtagacataagttatataaaccagaacagaatgat
gcagggtcactgtctggttccctgctagatggttttcttcctaccagtgaagaaaatggt
atgggacaggaaaatagtgttagaaatgttggtcatggaggtgcaggaacttttccatcc
cctgctgctcctgaaggttctcctggcacggcaggatggcggtatgtgtcgtggcttccc
agtttcagtgtagaacagagtcacacgcaactacctcgtcatcaccaagctaattcacaa
ccagcatcaacctctcagttggatagccttgccagacaggtacagcaaatgtttcctgat
gtctcatattcacacatattggaggatttacgccacactcattccttagaaataacaatt
gataatatccttgagcaacgcttggttaatccaccacccatgtttacttctgacgaaagc
tcaagccttttatttgatgttaagcaagataaagaagacaaccaacaaataatgaagcac
gatgaagatatagaggaagaagaagaatattttcaagatgctgaatcactgccactctca
aggctgtgtatggaagctctggctctcacacattcttccacatcagatgactccagtgac
acagaatcagaagggagtggttatgggatcggatcatgtggtgctgggagtcgttttagt
aaatctccacaagagagagaacagatgttggctcagcgaaagactgctctgctcaaccag
gcccgccgtcgctttgtcacaaagccaagaggtagcaatagtgtagatgaaatagagttg
cttgaggatggagaatgtgtagaaaactcctga
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