Homarus americanus (American lobster): 121855470
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Entry
121855470 CDS
T07477
Name
(RefSeq) replication factor C subunit 1-like
KO
K10754
replication factor C subunit 1
Organism
hame
Homarus americanus (American lobster)
Pathway
hame03030
DNA replication
hame03410
Base excision repair
hame03420
Nucleotide excision repair
hame03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121855470
03410 Base excision repair
121855470
03420 Nucleotide excision repair
121855470
03430 Mismatch repair
121855470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hame03032
]
121855470
03400 DNA repair and recombination proteins [BR:
hame03400
]
121855470
DNA replication proteins [BR:
hame03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
121855470
DNA repair and recombination proteins [BR:
hame03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
121855470
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
Rad17
AAA_22
RuvB_N
AAA_18
AAA_17
AAA_14
AAA_33
nSTAND3
BRCT_2
AAA_6
AAA_30
AAA_5
RNA_helicase
AAA_16
Motif
Other DBs
NCBI-GeneID:
121855470
NCBI-ProteinID:
XP_042206361
LinkDB
All DBs
Position
Unknown
AA seq
1105 aa
AA seq
DB search
MDIRNYFKPINSKKNGKTSSSSKETKKLIIIDSDEEELPAVSKRNRVLDSDSDDDIFVIK
NKKKTKKDEKPKPKTLPKPESPKLKPTAATDFFGKTPIARRESEHVSSKKRKSDDFHESQ
SDDAFERTLQQLDKEKQQVSKKPRIERKSSSHNEEKPKPNEYSPPNKTSLKLGLCSKLSA
KLKQFECNTDKYGDEETAQRNSNREEKLHTLENKHIEKDVKTGTECKEIGRTEDKAVKKE
EKFVKKERQIEEENIMKPEEKIFKKERQNKEENLIKPEEKTFKRDKITPKKENKVSPKNH
KPNIIIEKKQKEEKKVTPKKTEDDRESTEADSTPQDEKKKHARASYMKFLQRPGPANPGS
KLLPEGAPECLQGLVFVLSGVFDSLDREEAIDLIKKYGGKVTTSLSRNTTYLVLGSEAGA
SKLKKAEQLNTKQIDEDGLLELIRTRPGKEQKQEVTKGKTTNKLKAFAREIKEELPGKST
SVKDSPVPSSNITKTPSPKKSFSQSQSSQETGSPSSTSSTPKTQPISSQDLLGRQHETLM
WVDKYKPSTVKNIIGQQGDRSNVRKLLAWLKNWQKVQFSDMKPQRPSPWAKDDNGAFFKA
ALLSGPPGVGKTTTAHLVCKELGFDFVELNASDARSKRTLDEVVSGLLSNKSLAGFVKSN
GIRNPSSNHALVMDEVDGMSGNEDRGGVQELIALIKKSQVPIIAMCNDRNHPKIRSLANH
CFDLRFYKPRIEQIRGPMMSVCFREGIKIKPDALDQIIVGTNQDVRQILHHLSMWSANQR
NLEVDDMKREAQRAKKNLKMGPWDVCKAVFSESEHKNMSIHDKSGLFFHDYNIGPLFVQE
NYPKVVPHVAKGNRNITLEQLAKTASSLADGDLVEKAIRSNNAWSLLPTQAMFSSVIPGE
YMCGHLASQIEFPRWLGNHSRRNKFDRFMQELQKHMRLKISGSKLDVGLDYCGSLRSAIT
NPLVQHGGEGVSDAVRAMTSYDLLREDLDALLELSQWPGMTDPMSKVESKVKAAFTRTYN
KESHLTPFAAPSITKKKKGTKVGGEDMYGDEEEEEEDEEEEDISSSAMIKVNKGIKKGGE
AGTSKGKSRGGDNGKRGGGKGKGKK
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggatatacggaactatttcaaaccaattaacagcaaaaagaatggaaagacttcaagt
tcatctaaggaaactaagaaactgataattatagactcagatgaggaggagcttcctgca
gtttccaagaggaatagagtattagactctgactctgatgatgacatattcgtaattaaa
aataagaaaaagaccaagaaagatgaaaagccaaaacccaaaactttgcctaagccagaa
agtcctaagttaaagccaacggcagcaacagatttctttgggaagacaccaattgccaga
agagaatcagaacatgtctcatcaaagaaaaggaagagtgatgatttccatgaatctcag
agtgatgatgcctttgagagaaccctccagcagttagataaagaaaagcaacaagtgtcc
aagaaaccgagaattgaaaggaaatcctcctcacacaatgaagagaagccaaaaccgaat
gaatatagtcctccgaataagacctccctcaaacttggactgtgtagtaagttatcggct
aagcttaagcagtttgagtgtaatacagacaagtatggagatgaggaaactgcacagaga
aatagtaacagggaagaaaagttgcacactcttgagaataaacatattgagaaggacgtg
aaaaccgggacagaatgtaaggaaattggtcgtactgaagataaagcagtgaagaaggaa
gagaaattcgttaagaaagaaagacaaattgaagaagaaaatataatgaagccagaagaa
aagatatttaagaaagaaaggcaaaacaaagaagaaaatttaataaagccagaagaaaag
acatttaagagagataagataactccaaagaaagaaaacaaagtgtcccctaagaaccat
aaacccaacattattatagagaagaaacagaaggaagaaaagaaagtaacacccaagaag
acagaggatgacagagagtctactgaggcagactccacaccacaagatgagaagaagaaa
catgcaagggcctcatacatgaagtttctgcaaaggccggggccagccaatccggggagc
aaacttctccctgagggtgcaccagaatgtttacaaggtctggtgtttgttctgagtggt
gtgtttgacagccttgaccgggaagaagccattgatctcatcaagaaatatggaggtaaa
gttaccacgtctctcagccgcaacacaacctacctggtgttggggtcggaggcgggagcc
tctaaactaaagaaggctgaacagttaaacacaaaacagatagatgaagatggtcttttg
gaactgatacgcaccagaccggggaaagaacaaaagcaagaggtcactaaaggtaaaacc
acaaacaaactcaaggcctttgcaagagagataaaggaagaattgcctggaaaatcaacg
tctgtgaaagactctccagtcccctcgagtaacattacaaagacaccaagtccaaagaaa
tctttctctcagtcacagagttctcaggaaacaggaagtccttcatccacttcctcaacc
cccaagacacagcccatctcctcccaagatctcctaggcagacaacacgagactctcatg
tgggttgacaagtacaaaccatcaacagtaaagaacataattgggcaacagggagataga
tctaatgtaagaaaattactcgcatggctgaagaattggcagaaggtccaattcagtgat
atgaaacctcagagacccagtccttgggcaaaagatgataatggagcattctttaaggct
gccttgctgtctggacctcctggagtaggaaagacgacaactgctcacctggtgtgtaaa
gaacttggatttgattttgtggagttgaatgcatcagatgcgaggtcaaagcgaaccctc
gatgaagttgtgtcaggattactttccaataaaagcctcgcgggatttgtaaaaagtaat
ggtattagaaatcctagttcaaatcacgccctcgtcatggatgaagtggacggcatgtct
ggtaatgaagaccgaggaggagttcaagaactgattgctctcatcaagaaatcacaagtg
cccatcattgccatgtgtaatgaccgaaatcatcccaaaattaggtcattagctaatcat
tgttttgacctcaggttttacaagccaaggatagaacagattaggggaccaatgatgtcc
gtctgtttccgtgagggcatcaagatcaaaccagatgctctagatcagatcattgtcgga
acaaaccaagatgttcgccagattctccaccacttgtccatgtggtcagccaatcagcgc
aacctggaagtcgacgacatgaagagagaagctcaaagagccaaaaaaaacttgaaaatg
ggcccctgggatgtgtgtaaggcagtattctcagagtcggagcacaagaacatgagtata
cacgacaaatctggcctattcttccacgattacaacattggcccgctttttgttcaagag
aattatcctaaagttgttcctcatgtagccaagggtaaccggaatatcaccttggagcaa
ctagctaagacggccagcagtctagcagatggagacctggttgaaaaagcaattagaagt
aacaatgcctggtcactcctccctacacaggccatgttcagcagtgtgataccaggtgag
tacatgtgtggacaccttgcatcacagatagagtttccacgttggctcggcaaccacagt
cgtcgcaacaaatttgaccgattcatgcaagagcttcagaagcacatgagactcaaaatt
tccggtagtaagcttgatgttggcttagactactgcggctccctcagaagtgctataaca
aatccactggttcaacacggaggggagggcgtctcagatgccgtacgagctatgacatca
tatgacctcctacgcgaagatctggatgctctgttggagttatctcagtggccaggcatg
acggatcccatgagtaaggtggagagcaaggtgaaagctgcctttactcgtacctacaac
aaagagagccatttaactccatttgctgcaccgtccatcactaagaagaagaagggaact
aaagtaggaggggaagatatgtatggagatgaggaagaggaggaggaggatgaagaggag
gaagatatttcctcaagtgccatgataaaggtaaataaaggtatcaaaaagggcggagaa
gctggcactagcaaaggaaaaagtcgtggtggtgacaacggtaaaagaggaggaggcaaa
gggaaaggcaagaaatga
DBGET
integrated database retrieval system
