KEGG   Homarus americanus (American lobster): 121855606
Entry
121855606         CDS       T07477                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1-like
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
hame  Homarus americanus (American lobster)
Pathway
hame03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hame00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121855606
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hame03041]
    121855606
   04121 Ubiquitin system [BR:hame04121]
    121855606
Spliceosome [BR:hame03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    121855606
Ubiquitin system [BR:hame04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    121855606
SSDB
Motif
Pfam: SART-1 HIND
Other DBs
NCBI-GeneID: 121855606
NCBI-ProteinID: XP_042206588
LinkDB
Position
Unknown
AA seq 827 aa
MGSSKKSKDKDKTREERKEKKRKRRSRSGSREKDPERKHHHRHHHKHKKQRSKRREDRSR
SVSPSFSEDSLSDVEQLLQLKDEGQYMSRAGAGLPPPPKNSALPSSRFSAPPPPKISKRS
PSPPSTLFQGGGGGGDVSLSIDETNKIRAKLGLKPLKVDSMPIKEDDDQGADGEDREEKS
ASSKLDEFVHKPAESITQKLQVEKLREKIAAQREKRRIKERFQKVKNLGDSDSEEESARV
WVKKSRKLTKERELAEKKSKMLEELDAQFGIGDLVEADMTEQKVKKYSYNDLSGLQVQHE
FTRFDTGGPTILTLKDSNVLDGAEDTLINVNIVDDERAEKNLKRKKKKLDEVEYEAPEVD
EWGNIVQRTLLTKYDEEIEGEKKKSFRLGIGGGALAYDEMVPEAVRKIAKLRKLQNLETP
QSQLATEYLTESEMVSFRKVKKTKKKKKKKLTADDLEPIAEESLVHLGTRNARQARLEAL
QVIDDDISDGGQDQNTLNVGRTQTLRDLLEEEEEKVKMEIDDVEEGNESEQDDVELQEAL
ARSRRAKIAQASQPSTDKILDLMKEKQAKIEEEPMEEDDDDAGLVMTLNTTDEFCRTLGD
LPTYGLSGNRADDDQTMLQLQQPREKEAQEPRGAWEEVGIDDTRVEISDSMTVPILEEEP
DASKGVANALKLALKKGYLEKTNVTKSANAALQHLRAVHYSIEDKAVDDERGRGRGERYM
GPVTEFKDKDSYKPDVKLEYVDDEGRKLNAKEAFRYLSHKFHGKGSGKNKTEKRMKKWNE
ELLMKHMSSSDTPLQTLERQREKQKQLGAAYLVLSGSKTQETMEVKK
NT seq 2484 nt   +upstreamnt  +downstreamnt
atggggtcgtccaagaagagtaaagataaagacaagactagagaggaacgtaaagagaag
aagaggaagagacggtcaagatctggttcacgggagaaggacccagagaggaagcatcat
cataggcatcatcacaagcacaagaagcaacgcagtaagaggcgtgaggaccgttctcgc
tccgtctcaccgagcttcagcgaagacagtctctctgatgttgaacagctgttgcagtta
aaagatgaaggtcagtacatgtcacgtgcaggagcaggactaccgccaccaccgaagaac
tctgctctaccatcatcaagattttcagcccctccaccccccaaaatttccaaacggtct
ccttcccctccttcaacgctgtttcaagggggtggaggtgggggggatgtttcactttca
attgacgaaacaaacaagattcgggcaaaattaggattaaaaccccttaaggttgattca
atgcctataaaggaagatgatgaccagggagctgatggagaggacagggaggagaagagc
gcctcgagcaagcttgacgagttcgtccacaaacccgcggagagtattacccaaaagtta
caggtagaaaagctgagggagaaaattgctgcacagagagaaaagcggcgcatcaaggag
aggttccaaaaagtgaagaatctcggtgactctgacagtgaggaggagagcgctagagtc
tgggtgaagaagtcacgaaaattgacaaaggaaagggaactggcagagaaaaagagcaaa
atgttggaagagttggatgcccagtttggtattggtgacttagtggaggcagacatgact
gagcagaaggtcaagaagtacagctataatgacttgtcaggtctccaggttcagcatgag
tttacaagatttgatactggtgggccgaccattttaaccctgaaggacagtaatgtgtta
gatggtgctgaagatacattaataaatgtcaacattgtggatgatgagagagccgagaag
aatctgaaaaggaaaaagaagaagctggatgaggtggaatatgaagctccagaagttgat
gagtggggtaacattgttcagaggacacttcttaccaaatatgatgaggagattgaggga
gagaagaaaaagagtttccgtcttggtattggtggaggagccttggcctatgatgaaatg
gtaccagaagctgtgaggaagatagcaaagttacgtaagctacagaacctggagacccct
caatcccagttggcgacagagtacttgactgaaagtgaaatggtcagcttcaggaaagtt
aaaaagaccaagaaaaagaagaagaagaaattaacagcagacgacctggagccaattgca
gaggagtctcttgtgcatcttgggacaaggaatgcaagacaagcaagattagaggcattg
caagttattgatgatgatattagtgatggaggtcaagatcagaacacacttaacgtgggt
cggactcaaacactcagagatttgctggaggaagaagaggaaaaggtaaaaatggagata
gacgacgttgaggaaggtaacgagagtgaacaggacgatgttgagctccaggaggcgtta
gcccgttcccgcagagctaagattgcacaggcttcacaacccagcactgataaaattcta
gacttaatgaaagagaaacaagcaaagatagaagaggagccaatggaggaagatgatgat
gacgctggtctggtgatgacactcaacactactgatgaattttgccgcacactaggagac
ctccctacgtatggcctctctggtaatcgtgcagatgatgaccaaactatgctacaactt
cagcagccaagggagaaagaagcacaggagcctcggggagcctgggaggaagtaggcatt
gatgacacccgcgtggagatcagcgatagcatgactgttcccatcctggaggaggaacct
gatgctagcaagggtgttgccaatgctcttaagctggctctcaagaagggctacctagag
aaaaccaatgttactaaatctgctaatgctgccttgcaacacctcagggctgtacattac
agtatagaggacaaagctgtagacgatgagcgtggtcggggccgaggtgagcgctacatg
ggtccagttacagaatttaaagacaaagacagctacaagcccgatgtcaagctggaatat
gttgacgatgaaggacgtaaattaaatgctaaagaagcgttcagatatttgtcccacaag
ttccatgggaagggttcaggtaagaataagacagagaagaggatgaagaaatggaacgag
gagttgctgatgaaacacatgagctcctcagacacgccacttcagacgctggagcgacag
agagagaaacagaaacaacttggtgcggcttaccttgtgctctctgggagtaagactcaa
gagacaatggaggttaagaagtga

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