Homarus americanus (American lobster): 121855746
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Entry
121855746 CDS
T07477
Name
(RefSeq) uncharacterized protein LOC121855746
KO
K19026
spatacsin
Organism
hame
Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hame03400
]
121855746
DNA repair and recombination proteins [BR:
hame03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
121855746
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RPN11_C
HisK-N-like
Vps62
Motif
Other DBs
NCBI-GeneID:
121855746
NCBI-ProteinID:
XP_042206788
LinkDB
All DBs
Position
Unknown
AA seq
1250 aa
AA seq
DB search
MSAHRNVHKSVVVKKLTETPYSINQVLRADLESNNKGALILLADGRLILTVWVNKKVTSK
VVQDVSDACWQRGGESEVIIACQNGTLVRYSIHFDTGLSCSLQLSAASLLSLIRERDSNI
RSIRNPSLWGHTRHFILLQPQSDRLVLLSTNAGGRPTTQGVLRTPPLRTAHLYENIILVQ
PLTGTDLYEYDTSSCKLINVISLGLQRTGCKYIEWGSLACSSTGETIALADSERHLYVTN
FRHRTISGKKGGVGRARVTLHQVIWPSSLQLSRITELSLGLSNTVLTVFFRMEDEDRETQ
NYLSFDVNLSSLISHHCFAEQAAIILGITHDLPDLFLVADGVAMLMDEDASISSLDSEVD
IGELLGGMNEGLEEKNLAKVSEVKAMIEQGLSVFLASCNHQEGWTGLAEMRAKQYGQLAD
LLLSYIPRYAQQEDSHSTALSLKYLAKHHFSSVLEEMSNVLQYIDSENISQMVLQMTEQV
SFYLRSVEQLQLPQAGNDSELVQHHADWGDKPMKEIIEDALTKGQVKSAETYLQLKPWVY
GTIVTTSIVSTCIDVAREKLSEDSQLKALLNIDDDYNEELRQMMNLSDDQFEINIIGKVL
GSRGLLTLVETLAVQLVMTIHRTLPDLLTLPPQRWTELVCLGDASSAEVSAPVTVGQVAR
WTPLAIMLIITDLYAYAGDPEILENVDADVKWQYLLHQHDLNNLKRWIFREFNSQEADLH
ENELVQSEDLMRSNHNSRPSKNLQAGSFIPEKSGNDGNEKYENISESKYAGFNLLSGPLY
ASDVESSVKSHDSLDSSSLGPGDGDTWSVQSFEAHDRRDTVWSTELFKPITQSMIDLVII
AKEPFLELVLNILAKCGVFITREKGNAELLMRRLFMSGAFELVADFTGEHPCQVSESHIH
TVMMEFLGAHDLVLPAYDYVKNFSLDASEGKALEKLELPSWANTIVPFMKLLKTKPNKIL
YDLSVKNLVVLSETCQNPRELQFPAFLTMLFAPTKNLRDFIQYDVNSEPCGEIEELCTIL
ARHNMSLQQTAEGVVERFPILQKMFTKSENGTSLDVTVYDLLHGTVSFDLSRIFTFQKKN
RYGYDINAGITSFSNEELVKKHGILHSLEYLYYLKECRLTYACAAILASIYANKNKKKID
EFKNKVYGFALSSWPNRAICSACISVLLMTSLEADSLRIVLASAFLIYPRRTAWCMKLTT
EKRKGHELLIETEIGSILQQLCILETRAEAAAALLEMLENCIILSVAKIR
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcccaccgtaacgtgcacaagtctgtagtggtgaagaaactaacagaaacgcca
tactccattaatcaagttctcagggcagatctagaatctaacaacaaaggtgccctgatt
ctcttagctgatggcaggctaatacttactgtctgggtgaacaagaaagtcacctccaaa
gtagtccaggacgtgtctgatgcatgttggcaacgtggaggagagagtgaagtaattatt
gcttgccagaatgggactttggtgcggtattctatacactttgacactggactttcctgc
tcccttcagttatctgctgcgtcccttctttctctcatcagagaaagagactcaaatata
cgatctattcgtaaccccagcttatggggccacacacgtcacttcattctccttcagccc
caaagtgatcgcctggtgctcctttccacaaatgccggaggtcgtcctacaactcagggt
gttcttcggactcctcctcttcgtacagcacatctttatgagaacataattctagtacaa
cctttaactgggactgacctgtatgaatatgatacaagcagttgcaagttgataaatgtt
ataagccttggcctacagaggacaggttgtaagtatatagaatggggctcccttgcctgt
tcctcaactggtgaaactatagcattagcagattctgaacggcatctttatgtaacaaat
tttaggcatcgaacaatatctgggaaaaaaggtggagtaggcagggcaagagtgactctt
catcaagtgatctggccatcaagtctccaactatcaagaatcacagagttatccttgggt
ttatcaaatactgtgctcactgtgttctttcgaatggaagatgaggacagagaaacccag
aactacctgagttttgacgtaaatttgagcagcctcatcagccatcactgttttgctgag
caggcagccatcatccttggcataacccatgatctgcctgatctcttccttgttgctgat
ggtgttgcaatgttaatggatgaggatgcctctataagtagtctggattctgaggttgac
attggagaattactgggtggtatgaatgaaggtcttgaggagaagaacttggctaaagta
tcagaggttaaagccatgatagaacaagggttgagtgtattcctggcatcatgtaaccac
caagagggttggacaggtctggcagagatgagagcaaagcagtatggtcaacttgcagat
ttacttctcagttacattcctcgttatgctcagcaggaggattcacattccacagcgtta
tctctcaagtacctcgccaagcatcatttctcgagtgtactagaagagatgagtaatgtg
cttcagtacattgacagtgaaaatatatctcagatggtgttacaaatgacagaacaggta
tcattttatctacgtagtgtagagcagttgcagttgccacaagcaggaaatgacagtgaa
ctagttcagcaccatgcagattggggagacaagccaatgaaggaaatcatagaagatgca
cttaccaaaggtcaagtaaagtctgcagaaacttatcttcaactgaagccctgggtgtat
ggtacaattgtcacaactagtattgtttctacttgcattgatgttgcaagggagaaattg
tctgaagactcacagctcaaagctctactgaatattgatgatgactacaatgaagaatta
agacagatgatgaacttaagtgatgatcagtttgaaataaatattataggaaaagtatta
ggaagcagaggtctgttgacacttgttgaaactttggcagtacagttggtgatgactatc
catagaacactaccagatcttcttactctcccaccgcagagatggacagaattggtgtgt
ttgggtgatgcttcctctgcagaggtgtcagctccagtgacagttggacaagtggcacgc
tggactccactggcgataatgcttattatcactgatctttatgcctatgctggagaccca
gagattttggagaatgtggatgccgatgtaaagtggcagtaccttcttcatcaacatgat
ttaaacaacttgaagcggtggatcttcagggagtttaatagtcaagaagcagacctgcat
gaaaatgaactagtacaaagtgaagatttgatgaggtcaaatcacaattctaggccctct
aagaacctgcaagcaggatcattcattccagaaaaatcaggaaatgatggaaatgagaag
tatgaaaatatatcagagtcaaaatatgcaggattcaacctgttgagtggaccactgtat
gctagtgatgtggagtcttctgtcaagtcccacgactctttagattcctcttctcttgga
cctggtgatggagatacgtggagtgtgcagagttttgaagctcatgaccgcagggacaca
gtgtggtcaacagaactctttaaacccataacacaaagtatgattgatctagtgataatt
gccaaagaaccatttttggagttagtgttaaatattttagccaagtgtggagtcttcatt
acaagagaaaaaggtaatgctgaattactcatgagacgactgtttatgtcgggagctttt
gaacttgttgcggatttcactggagaacacccctgccaggtctctgaaagccacattcat
acagtaatgatggagtttctgggggcccatgatcttgttttacctgcctatgattatgtt
aaaaacttttccttggatgcttctgaaggtaaagccctagaaaaacttgaattgccatct
tgggcaaatacaattgttccctttatgaagcttctgaagacaaaacccaacaaaattttg
tatgacttgagtgtgaaaaatcttgtagttcttagtgaaacttgtcaaaatcctcgagaa
ctacagtttccagcctttctcaccatgctctttgctccaaccaagaacttgagagatttt
attcagtatgatgtaaatagtgaaccttgtggtgaaatagaagagctatgtactatcctt
gccaggcataacatgtccttacagcaaacagcagaaggagttgtggagaggtttcccatt
ttgcagaagatgtttacaaaatcagaaaatggtacatcattggatgttactgtctatgat
ctcctgcatggcacagtttcttttgacctgagtcggatctttacatttcagaaaaagaac
agatatgggtatgatataaatgctggaattactagttttagtaatgaagagttggtaaaa
aaacatggcatcctgcattccttggagtatttgtactatcttaaagaatgtcgactcacg
tatgcttgtgctgcaatcctggcaagcatttatgcaaacaaaaacaagaaaaaaattgat
gaattcaagaacaaagtgtatggatttgctctcagtagttggccaaaccgtgccatttgt
tctgcctgtatatctgttcttctcatgactagccttgaggctgactccctcaggatagtt
ttggcttctgcatttctgatctatcccagacgaactgcatggtgcatgaagctgaccaca
gagaaacgaaaaggacatgaacttcttattgaaacagaaattggaagtattcttcagcaa
ctttgtattctggaaactagagcagaggctgcagcagctttattagaaatgcttgaaaac
tgtattattctgtcagttgcaaaaataaggtaa
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integrated database retrieval system
