KEGG   Homarus americanus (American lobster): 121856040
Entry
121856040         CDS       T07477                                 
Name
(RefSeq) DNA repair protein XRCC1-like isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
hame  Homarus americanus (American lobster)
Pathway
hame03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hame00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    121856040
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hame03400]
    121856040
DNA repair and recombination proteins [BR:hame03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     121856040
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT RTT107_BRCT_5
Other DBs
NCBI-GeneID: 121856040
NCBI-ProteinID: XP_042207241
LinkDB
Position
Unknown
AA seq 694 aa
MPPIVFTEVLTFSSEDPNHPAENLIRADTFRKWKCAPGTAEKQSSVTLKLEKLSSIQSID
IGNEGSAFVEVLAGREGAAAFQVLLVASSFMTPIESRNCSDMHRVRMFGPDKLNKNVATQ
KWDRLKIICTQPFNKNMQYGLSFITVRAPGDDPKPSPPKMTRLGSFTLKDEEEDDNIKTG
DLFARRKEKESSPAISGAAGIRAASAAALASVSSPGANKRKSQDPPPESGFYQLKKTKVS
DPDPTKTSPVSKPARPPSASTPHRNDQSYDRERDKVGVNGRKIEKHEVKHRPSESGEKER
KGEKHKSKNSSVEKTQTATTPKPTASGPVPQKAKKSKPFTSLMDDILFVMSGYQNPQRSQ
LRDMMLDMGARYQGDWDKKCTHLICAFTNTPKYQQVKGRGKIVSAKWITDCHKNKIRYPC
KRYSLEKGRDQAESEEEVWAEELLPKESKPVVKPAAPSPIPGATATPELDDDTDSDDNED
TDDEIERVLARQKKNEAESTSKKADSSENNTRPDTQKRIVEKDTKLPPQVNIRKNKTTSQ
AVKTNEGLRTDKDTHVANGATVSSDDEVYDDDTDVDEANIKYLSLQQKPPDTSALPLPSL
GDFLKGKYFYIYGKLAEEKKQLLRRYIIAFKGELEDYMSEKVQIVITEDRWDKNFDEALN
DNPNLQFVKPVWIWRCCDKQKLVPYQPYLVVPAE
NT seq 2085 nt   +upstreamnt  +downstreamnt
atgcctcctattgtgtttaccgaggtgctgacgttctccagtgaagatccgaatcatcca
gcagaaaacctcatacgtgctgacacatttcgtaagtggaagtgtgctcctgggacagca
gagaaacaatcttcagtcacactgaagctggaaaagttgagttctatccagtccatcgac
atcggcaatgaaggatcagcatttgtggaggtgttggcaggcagagaaggagctgcagct
tttcaggtactgcttgttgcttcatcctttatgactcctattgagtcaagaaattgcagc
gacatgcaccgtgtccgcatgtttggtcctgataagctgaacaaaaatgtggcaacacag
aagtgggatcgcctaaaaattatttgcacacaaccattcaacaagaatatgcagtatggc
ctgtccttcatcactgttcgagcccctggagatgaccccaaaccgtccccacctaaaatg
accagacttggaagtttcacgctgaaggacgaggaggaggacgacaatataaaaactggc
gatttatttgcccgaagaaaagaaaaggaatcttctccagccatatctggtgcagcaggc
atccgagctgcatcagcagctgctctagcctctgtctcgtcaccaggagccaataagaga
aaaagtcaggacccaccacctgagtcaggattctaccagttgaagaaaacaaaagtttcg
gacccagatccaacaaagacttcacctgtgtccaaacctgcacgacctccctctgcctcc
acccctcacaggaatgaccagagttatgatagagaaagagataaggttggagtaaatgga
cgtaaaattgagaaacatgaagtgaaacacagaccttcagagagtggtgagaaagagaga
aaaggagagaaacataagagtaagaacagcagtgtagaaaaaacccaaactgccactaca
cccaaaccaacagcatcaggaccagtgccacagaaagctaagaagtccaagcctttcact
tcactgatggacgacattttgttcgtgatgagcggttatcagaatccacagcggtcacaa
ctgagggacatgatgttagacatgggagccaggtaccagggtgactgggacaaaaaatgc
acccacctgatttgtgccttcactaacactccaaagtaccaacaagtgaagggccgtggt
aaaattgtctcggccaagtggatcaccgactgccacaagaataagattagatacccctgt
aaaaggtactctctggaaaaggggcgtgatcaggctgagagtgaagaggaagtctgggcg
gaagaacttttgcctaaagaatccaaaccagttgtaaaaccagccgctccttcacctatc
ccaggagctactgccaccccagaacttgatgatgatactgactcagatgacaatgaagat
acagatgatgaaattgaaagggttcttgcaagacagaagaagaatgaagcagaatcaacc
tctaagaaggcagactcatcagaaaataacacaaggccagatacccaaaaaagaatagta
gagaaagacacgaaactgcctcctcaagtaaatataaggaaaaacaaaactacatctcag
gcagtaaaaacaaatgaaggtttgagaacagataaagacacacacgtggcaaatggagct
acagtgagcagtgatgacgaggtgtacgatgatgacacggatgtagatgaagcaaacatt
aagtacctgtctctccaacagaaacccccagacacctcagctttgccactacccagcctt
ggagatttccttaagggaaaatatttttatatttatggaaagttagcagaagagaaaaag
cagttgttgcgacgttatattattgcttttaaaggagagttagaggattacatgagtgaa
aaagtgcaaattgtcattaccgaagacagatgggacaagaactttgatgaggctctgaat
gacaaccctaacctgcagtttgtcaaacctgtgtggatatggcgctgttgtgacaagcag
aaacttgttccttatcagccatatttggtggtgccagcagagtaa

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