KEGG   Homarus americanus (American lobster): 121856060
Entry
121856060         CDS       T07477                                 
Name
(RefSeq) nucleoporin NDC1-like isoform X1
  KO
K14315  nucleoporin NDC1
Organism
hame  Homarus americanus (American lobster)
Pathway
hame03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:hame00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    121856060
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hame03019]
    121856060
Messenger RNA biogenesis [BR:hame03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     121856060
SSDB
Motif
Pfam: Ndc1_Nup TMEM160
Other DBs
NCBI-GeneID: 121856060
NCBI-ProteinID: XP_042207274
LinkDB
Position
Unknown
AA seq 553 aa
MKPEDLFSSEVLLWRYVRALACLLLLQVVAPMAVCNLYHTVVAQRILNPITVTTNLLTSC
IYPTKLLRLVVPAACFVILARVHIKSYTVSAWVPLNRWEKWRRVLSLTVILRSGLIMIAC
ALLANFYTSLAHPDFPFLVIPCTPGDVMCYKRKTVIIYMGAYVGYHYAYKYFMLNGNLIT
PTPAHPRKLQLIKASLSLRSTREACNTHGANKLSFLCAICIYMAAAIMINLIYDGNWQEW
LVIFDLPLMMMTLLATVLLAISLSLFSQVFHIFITEPVEIPVATAEDSNPEAETDSWRLS
NALSSSGLLQLLAFWDLKTLASSDPMNFARRTQVFCISQPGGHPRNWMGIMNPSMNLIRK
FCERLKRHNCPEDLPKPPVVPAGAASAPTDVNKNEVVKPPPVPFKERAVKLIMSLKRYPF
FGYFLSDLPDATNRSIFAEALPVIWAVQALGDLVTASFTEDKFGVVQRNIPDILMAFTQL
QKVVDGLGRVTISRRPGTGEALPSELQLRKALRFSLRSALYTVTTTFGDTVLAMPVSAEC
QSKLQSYLQFKEG
NT seq 1662 nt   +upstreamnt  +downstreamnt
atgaagcctgaggacctattctctagtgaggttttgctgtggcgatatgtgcgagcactg
gcatgcttgttgctcctgcaggttgtggccccgatggctgtgtgcaacctttaccacaca
gttgttgcgcaaagaatactgaaccccatcacagttaccacaaatctcctgacctcctgc
atctatccaacaaaactgctgcgtctagtggtcccagccgcgtgttttgttatactggca
cgagttcacattaagtcttacactgtgagtgcctgggtaccactcaatcgctgggagaaa
tggagacgtgtactctccctcactgtgatcttgagaagtggactcatcatgatagcatgt
gctctactggccaacttttatacttcacttgcacatcctgattttccattccttgtgata
ccatgtacacctggggacgtcatgtgttacaagcgcaagactgtaataatctatatgggt
gcctatgttggttaccactacgcctacaagtacttcatgttgaatggtaatctaataaca
cccaccccggctcacccgagaaagttgcaattgatcaaagcaagccttagtcttcgcagt
acgagggaagcttgtaatactcatggggctaacaagttgtcattcttatgtgccatctgt
atttatatggctgctgctatcatgataaacttgatatatgatggaaactggcaggagtgg
ttggtaatatttgacttgcctctgatgatgatgactctgctggcgactgttctcttggca
atcagtctctccctcttctcacaagtcttccacattttcataacagagcccgttgagata
ccagttgccacagcagaggacagcaacccagaagccgagacagattcatggaggcttagt
aatgccctcagttcatccggccttctccaactcttagcattttgggacctcaagacacta
gcctcttcagaccccatgaattttgcaaggcgcactcaagtgttttgtatcagccagcca
ggtggccatccccggaactggatgggcatcatgaacccatctatgaacctaatccgtaaa
ttctgtgagcgactaaagcgacacaactgcccggaagatctgcccaaacctcccgtagtg
cccgctggggcagcgtctgccccgactgatgtcaacaagaatgaagttgtcaagccacct
cctgtcccatttaaagagagagcagtgaagcttataatgagtttgaaacggtaccccttc
tttgggtattttttatcggacttgcctgatgctaccaaccgaagcatctttgccgaagcg
ctgccagtcatttgggctgtgcaggctctcggtgatctggtgacggcatctttcacggaa
gacaagtttggtgtagtgcagaggaatataccagatattttaatggcctttacacagtta
caaaaggtggttgatgggttgggccgtgtgaccatatctaggaggcctggtacaggagag
gctttaccgtcagaattacagctgagaaaagcactccgattttctctcagatccgccttg
tacactgtcaccaccacctttggagacactgtattggcgatgccggtatcagcagaatgc
cagagtaaactgcagtcgtaccttcagtttaaagaaggttga

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