Homarus americanus (American lobster): 121856060
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Entry
121856060 CDS
T07477
Name
(RefSeq) nucleoporin NDC1-like isoform X1
KO
K14315
nucleoporin NDC1
Organism
hame
Homarus americanus (American lobster)
Pathway
hame03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121856060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hame03019
]
121856060
Messenger RNA biogenesis [BR:
hame03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121856060
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
TMEM160
Motif
Other DBs
NCBI-GeneID:
121856060
NCBI-ProteinID:
XP_042207274
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
MKPEDLFSSEVLLWRYVRALACLLLLQVVAPMAVCNLYHTVVAQRILNPITVTTNLLTSC
IYPTKLLRLVVPAACFVILARVHIKSYTVSAWVPLNRWEKWRRVLSLTVILRSGLIMIAC
ALLANFYTSLAHPDFPFLVIPCTPGDVMCYKRKTVIIYMGAYVGYHYAYKYFMLNGNLIT
PTPAHPRKLQLIKASLSLRSTREACNTHGANKLSFLCAICIYMAAAIMINLIYDGNWQEW
LVIFDLPLMMMTLLATVLLAISLSLFSQVFHIFITEPVEIPVATAEDSNPEAETDSWRLS
NALSSSGLLQLLAFWDLKTLASSDPMNFARRTQVFCISQPGGHPRNWMGIMNPSMNLIRK
FCERLKRHNCPEDLPKPPVVPAGAASAPTDVNKNEVVKPPPVPFKERAVKLIMSLKRYPF
FGYFLSDLPDATNRSIFAEALPVIWAVQALGDLVTASFTEDKFGVVQRNIPDILMAFTQL
QKVVDGLGRVTISRRPGTGEALPSELQLRKALRFSLRSALYTVTTTFGDTVLAMPVSAEC
QSKLQSYLQFKEG
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctgaggacctattctctagtgaggttttgctgtggcgatatgtgcgagcactg
gcatgcttgttgctcctgcaggttgtggccccgatggctgtgtgcaacctttaccacaca
gttgttgcgcaaagaatactgaaccccatcacagttaccacaaatctcctgacctcctgc
atctatccaacaaaactgctgcgtctagtggtcccagccgcgtgttttgttatactggca
cgagttcacattaagtcttacactgtgagtgcctgggtaccactcaatcgctgggagaaa
tggagacgtgtactctccctcactgtgatcttgagaagtggactcatcatgatagcatgt
gctctactggccaacttttatacttcacttgcacatcctgattttccattccttgtgata
ccatgtacacctggggacgtcatgtgttacaagcgcaagactgtaataatctatatgggt
gcctatgttggttaccactacgcctacaagtacttcatgttgaatggtaatctaataaca
cccaccccggctcacccgagaaagttgcaattgatcaaagcaagccttagtcttcgcagt
acgagggaagcttgtaatactcatggggctaacaagttgtcattcttatgtgccatctgt
atttatatggctgctgctatcatgataaacttgatatatgatggaaactggcaggagtgg
ttggtaatatttgacttgcctctgatgatgatgactctgctggcgactgttctcttggca
atcagtctctccctcttctcacaagtcttccacattttcataacagagcccgttgagata
ccagttgccacagcagaggacagcaacccagaagccgagacagattcatggaggcttagt
aatgccctcagttcatccggccttctccaactcttagcattttgggacctcaagacacta
gcctcttcagaccccatgaattttgcaaggcgcactcaagtgttttgtatcagccagcca
ggtggccatccccggaactggatgggcatcatgaacccatctatgaacctaatccgtaaa
ttctgtgagcgactaaagcgacacaactgcccggaagatctgcccaaacctcccgtagtg
cccgctggggcagcgtctgccccgactgatgtcaacaagaatgaagttgtcaagccacct
cctgtcccatttaaagagagagcagtgaagcttataatgagtttgaaacggtaccccttc
tttgggtattttttatcggacttgcctgatgctaccaaccgaagcatctttgccgaagcg
ctgccagtcatttgggctgtgcaggctctcggtgatctggtgacggcatctttcacggaa
gacaagtttggtgtagtgcagaggaatataccagatattttaatggcctttacacagtta
caaaaggtggttgatgggttgggccgtgtgaccatatctaggaggcctggtacaggagag
gctttaccgtcagaattacagctgagaaaagcactccgattttctctcagatccgccttg
tacactgtcaccaccacctttggagacactgtattggcgatgccggtatcagcagaatgc
cagagtaaactgcagtcgtaccttcagtttaaagaaggttga
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