Homarus americanus (American lobster): 121857546
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Entry
121857546 CDS
T07477
Name
(RefSeq) RB1-inducible coiled-coil protein 1-like
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
hame
Homarus americanus (American lobster)
Pathway
hame04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121857546
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hame01009
]
121857546
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hame04131
]
121857546
03029 Mitochondrial biogenesis [BR:
hame03029
]
121857546
Protein phosphatases and associated proteins [BR:
hame01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121857546
Membrane trafficking [BR:
hame04131
]
Autophagy
Autophagosome formation proteins
ULK complex
121857546
Mitochondrial biogenesis [BR:
hame03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
121857546
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG17_like
TBK1_ULD
Fez1
ubiquitin
Rad60-SLD
Motif
Other DBs
NCBI-GeneID:
121857546
NCBI-ProteinID:
XP_042209563
LinkDB
All DBs
Position
Unknown
AA seq
1450 aa
AA seq
DB search
MIYVFLVDTGTMMTFDMNLALENVSVLKEVINRAMKVPPEKQVLLISGGEALDPNQRVCQ
YSAGTDTNPIFLFSKTTIEGQTPPSPSIDYGTDTDLKDQVEGALNMPASYNTVVARAQLA
QQFHEHSRDQTRTCQQLVHDQHLQQQGWAAVVANLEDIVSAFKNRFENFESSFNECLKGR
DEKSGILENFEEDLKLLSRIPVLPALLGERKRKNESQHGGKVDETENNAEEDKDGIEGCE
AKPTMSLLDWISAKDSQSNVGQIAQLCYRGLTQINEGMLTQLASEVNSVSHEADRPQMKE
IKGLGERLFGLEQLMHEANKIVQEQNNFAQALIQNQNRAGKVNDPSIFPDLCTSHRKNLM
HMLKNHQRVQDIKRRCIKAKEELSENLHVRLKWIMYIEKKLYELDNKLTMHHENVRRVTG
LLQVIEQIHRAPRVYVSAITEVARRHTFSKSFVQWATALSTESSDVWQREVTTRRHFIHQ
FSSHFLASLFPGMDDLPPDFATQPPDTFDDTLPNLTEENIEQLRAILPELASMLVVGEVI
SIPPLLQVALQSHTSNTHSPRSSEVFLKEGSGDMYTSAVTTAASVTPRNTPDRDGNHRGQ
QLRPLSLTREHHESETDTEEFEKVGCSGGSDGTFSPMEVMPDNSRGSMKTKQHFSTQVND
SKHIKLDGGTGSTSPVGGAVQEELRPGTVATRGNVASPASPQDPAISPESMLTSQEFVTA
EYYIDESMPSSYTESGGTAASCSRHPPPMVKTHHVITAELQQQLEDKNSAILNLQTDLTQ
AKEEVDQLQQRLSALASLQCQDEVLSLKSELASLRGKVRDEGETYVNYISELSSRILDVL
LQVYPGADIGRAGALISGDAGQADQDRLQEQLRGTVDLQSHKLNDAQREIEMYQEQLHRH
QETLQQTTVEFEEAKRLLIEEKVEAVKRLTLEHELEMVNLKERWQEDDSSRQEEIIVLTQ
KLKSLEETLQCAERERSDLENNFKERFAAHIQEEKDKIVKILEVSFSEREKNALESLREQ
LINEHQAHVSRLLKEKEEAIQAACEEVRTKLVVEWREVVDQQHKDLTEKHAAHYAQCKHQ
WEQEKRTEIADKVAEIETRWRDERDSNVEHVRQQYKMELEGLRSRFRMMTTASMDKSPSE
TSLEKFERGDFLDMGAHEAALARLREELLKEKEVAIEETKIGLQEQFGQVRRDELQKHET
MRKDERRRIEAEKQIVFNDAIKSVSQDKERVIEDLRLRVELLTDETEKLRRLMHNAATGS
TDHLMSALVSENEALKERCEILQKDITRLEGEVLRVKRLSFVVTPERPTDLSMSFTESGA
SAVSPSGSLSANEDVRKLQQENQELRDKLRPFMPGPGNVLLVWDDHHLHYRVLLEGNPHL
HFLHLIHTHTLASNHLHVLFTETPHKMYCTAEVVSKEFCQAKKVSVDLCLSSSQLLLSSE
ILIIVIILFK
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atgatctacgtattcctcgtcgacactggcacgatgatgaccttcgatatgaacctggcc
ctcgagaatgtgtcggtgctgaaagaagtcatcaaccgagcgatgaaagtccccccagag
aaacaggttcttctcatctctggaggggaagcgctcgaccccaatcagcgagtatgccag
tactcagcgggtactgacaccaatcctatcttcctgttctccaagactaccatagagggc
cagactcctccatcacctagtattgattacgggactgatactgaccttaaggaccaggtg
gagggagcgttgaacatgccagccagttacaacacagtggtcgctcgggcacagttggct
cagcagtttcacgaacactcccgcgaccagacccgcacttgtcaacagttagtgcacgac
cagcatctgcagcaacaaggatgggcagccgtggtagccaacctagaggacattgtgtcg
gctttcaagaacagattcgagaattttgagtcgagttttaatgaatgcttgaagggacgc
gacgagaagtctggaattcttgagaatttcgaagaagacttgaagctcttgtccagaata
cccgttctgccggcgctgttaggagagaggaagagaaagaatgaatcccagcacgggggt
aaagttgacgagacggagaataacgcggaggaagacaaggacggcatcgagggctgcgag
gctaaaccaactatgagtcttctggactggatcagcgccaaagacagccagagcaacgtg
ggacagatcgctcaactctgttaccgcggcctaacgcagatcaatgagggaatgttgaca
cagctggcgagtgaggtcaacagcgtgagtcacgaagccgaccgtccgcagatgaaggag
attaagggcctcggggaacggctctttgggctcgaacaactgatgcacgaggccaacaag
atcgtccaggaacagaacaattttgctcaggcgttgatccagaaccagaatcgtgcgggg
aaggtaaacgatccgtcgatcttccccgacctctgtacgtcccataggaagaacctcatg
cacatgctcaagaaccatcagagggtacaagacatcaaacgacgatgcataaaagccaag
gaagaactctcggaaaacctgcacgtcagattaaagtggataatgtacatagagaaaaag
ctgtacgaactcgacaacaaactcactatgcatcacgagaacgtccgcagagtcacgggg
cttctccaggtcatcgaacagatccaccgagcacctcgtgtttacgtcagcgccatcacc
gaggtcgcacgcagacacacattctccaagtctttcgttcagtgggcgacggcactaagc
acagagagcagtgacgtgtggcagcgggaggtaacgaccagacgacatttcatccaccag
ttctcgtcgcacttcctagccagtctcttccctggcatggatgacctcccgccggatttc
gccactcagccgccggatacattcgacgatacactaccaaacctaacagaggagaacata
gaacagttacgggcgatattaccagagttggcgtccatgttggtggtgggggaagtgatc
tccatccctcctctcctccaggtggcgctacagtcacatacctccaacacccacagtcct
aggagtagcgaggtgtttttaaaggaaggaagcggagacatgtacacatcagcggtgacc
acagcggcctccgtcaccccccgcaacactccagacagagacggcaaccacagaggtcaa
caactacggccgttgtccctcacgagggaacaccacgagtcagagacggacacggaggag
tttgagaaggtcgggtgtagtggcggcagtgacggcactttctcccccatggaggtgatg
ccagacaacagccgaggatccatgaagacaaaacaacatttctcgactcaggttaacgac
tctaaacacatcaagctcgacgggggcactgggtcaacgtctcctgtggggggggcggtc
caggaggaactcaggccgggcactgtagccacgcggggaaacgtagcgtcaccggcgtcc
ccccaagaccctgcgatcagccccgagtctatgctcacatcccaggagtttgtcaccgcc
gaatactacattgatgagtcgatgccctctagctacacggagagcggcgggacggcggca
tcgtgctccagacacccgccccccatggtcaagactcaccacgtcatcaccgccgaacta
cagcaacaactagaggataagaactcggccatattgaacctccagaccgacctgacacaa
gccaaggaagaagtggaccagctacagcaacgcctcagtgccctcgcctccctacagtgc
caagatgaagtgctcagtcttaagtcggagttggcgtccttacgggggaaggtccgcgac
gagggagagacgtacgtaaactacatatcggaactttcgtcgagaatcttggacgttttg
cttcaggtgtatccaggtgcagacatcggccgagcaggcgcactgataagtggcgatgct
ggccaggctgaccaggaccgcctccaggaacaactgaggggaacggtggacctgcagtca
cacaagctgaacgacgcccagcgggagattgagatgtatcaggaacaattgcaccgccat
caggagaccctgcagcaaacgacggtggaattcgaggaagccaaacgcctgttgatcgag
gagaaggtcgaggccgttaaacgcttgaccttggagcacgaacttgagatggttaacctg
aaggagcgctggcaagaggacgactcgagccgacaggaggaaattatcgttctgacgcag
aaactgaaaagcctcgaagaaaccctccagtgcgcagaaagggaacgcagcgacctggag
aacaacttcaaggaacgcttcgccgctcacatccaggaggagaaggacaagatagtgaag
atcctcgaagtgagttttagcgagagagagaagaatgccctcgagagtctaagggaacag
ctgatcaacgaacaccaggcgcacgttagtaggcttttgaaggagaaggaagaggcaata
caagccgcctgcgaggaggtgcggacaaagctggtggtagagtggcgggaggtggtcgac
caacagcacaaagacctgacggagaaacacgccgcccattacgcacagtgtaaacatcag
tgggaacaggagaagagaacggagatcgcggacaaggttgcggagattgagacgcggtgg
agagacgagagagactccaacgtggaacatgtccgccagcagtacaagatggagttggag
ggcctgaggtcgaggtttaggatgatgactacagccagtatggataagtcgccctcggag
acttccctcgagaaatttgagcgcggcgatttcctggacatgggggcacacgaggcggcc
ctggccagactgagggaggaactattgaaggagaaggaagtggccattgaggagacgaag
atcggcctccaggaacagtttggccaagtgaggagagacgaacttcagaaacacgagact
atgaggaaagacgagaggcggcggattgaagcggagaagcagattgtatttaacgacgcc
atcaagtcggtctcccaggataaagagagagtaatcgaagatctccggcttagagtcgaa
ctcctcacggacgagacggagaaattgcggagactgatgcacaacgcggccacgggctcc
accgaccacctcatgagtgccctggtctccgagaacgaggcgcttaaggaacgttgcgag
atactccagaaggatataacacgcctagagggtgaggttctccgggtcaaacgcctcagt
ttcgtcgtcacgccagaacgaccgaccgacttgagcatgtcgtttacagagtccggagct
tcggcagtttccccgtccggttcgctgagcgccaacgaagatgtcaggaaacttcagcag
gaaaaccaagagttgagggataaattgcgtccattcatgcccgggccgggaaacgtcctt
ctggtatgggatgaccaccacctccactatcgagtcctacttgaagggaatccacacctc
cacttcctccatttgattcatacacataccttggcctcaaatcatttacacgtcttattt
acagagacgccccataagatgtactgcacagctgaggtcgtgagcaaggagttctgtcag
gccaagaaagtgagtgttgacttgtgtctttcttcctctcaattgcttctctcgtctgaa
attcttattattgtgattattctctttaagtaa
DBGET
integrated database retrieval system
