Homarus americanus (American lobster): 121858258
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Entry
121858258 CDS
T07477
Name
(RefSeq) autophagy-related protein 16-1-like
KO
K17890
autophagy-related protein 16-1
Organism
hame
Homarus americanus (American lobster)
Pathway
hame04136
Autophagy - other
hame04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121858258
04136 Autophagy - other
121858258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hame04131
]
121858258
03029 Mitochondrial biogenesis [BR:
hame03029
]
121858258
Membrane trafficking [BR:
hame04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
121858258
Others
Specific organelles associated proteins
Auto phagosome
121858258
Mitochondrial biogenesis [BR:
hame03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
121858258
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG16
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_EIPR1
eIF2A
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_NWD2_C
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
Cytochrom_D1
Beta-prop_IFT122_1st
DUF7653
Ald_deCOase
GTP-bdg_M
Motif
Other DBs
NCBI-GeneID:
121858258
NCBI-ProteinID:
XP_042210496
LinkDB
All DBs
Position
Unknown
AA seq
556 aa
AA seq
DB search
MAWNKASEGDWRQSIYCKLRERNKKEYENINDLIQLHNRLFEQSESLRTENLHLTLQNER
LRQENTQLQSQGGGGGGEGGGSSSVVVQALEQKVYKLQEELTNLHRRKGENAQQLVELNQ
CLQERDKLMASKDNKLAEYESDLLILREDLAAKEAVLADVQAVNQVLRDEYQTLNLAFTA
LEDKYRKAQGENRELIDRWMAQKAKDAEKLNMENDTALKKRQLVLEEQLKEAAREPKQVN
TDDKFACSPPICLTAILPAKAYLKFDAHDGEVNSVCFSPQGRILATGGADRKLKLWDISR
ATVEAKGLLTGSNAGVTAIDFDAEESLILGASNDFASRVWTVVDHRLRHTLTGHSGKVMA
ARFLSESAKVVTGSHDRTLKIWDLRSRACIRTIFAGSSCNDLVPSDSAATTIISGHFDKK
IRFWDTRTEQSANEVPLQGKITSLSLSRDGFYLLSCVRDDSLKILDLRKNKVVHTFTGDG
FHVGTDYTRATFSPDAMYVAAGTGDGAVYIWNVNTGKLEKTFREHSACVVACTWHPSGKS
LVSCDRAKKVIAWSDF
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcttggaataaagcgagtgaaggtgactggcgacaaagcatttattgtaaactacga
gaaagaaataaaaaagaatacgaaaacatcaatgatcttattcaactacataatcgtctt
tttgaacaaagcgaatctctaagaacggaaaatctgcatctaactcttcagaatgagagg
ctccgtcaagagaatacacaactccagagtcagggaggtggtggtggtggtgaaggtgga
ggatcctcatcagttgttgttcaggctttggagcaaaaagtatataaactacaagaagag
ctgacaaacttgcacagacggaaaggtgagaatgctcagcaactggtagaattgaaccag
tgccttcaggaacgtgataaacttatggcatcaaaagacaacaaattggcggaatatgag
tcagaccttctaattttacgagaagatttggcagcaaaagaggcagtgcttgcagatgtc
caggctgttaaccaagtactacgagatgaataccaaaccctcaacttagcctttacagct
cttgaagataaatacaggaaagcacagggggaaaatcgagagctgattgaccggtggatg
gcacagaaggcaaaagatgcagaaaaacttaacatggagaatgacacagcacttaagaaa
cgacaattggtgcttgaggagcaactgaaagaagcagcacgagaacccaaacaagtgaat
actgatgataaatttgcctgcagccctcccatctgtctcactgctattctaccagccaag
gcctaccttaaatttgatgcccatgatggagaggtgaattcggtatgcttcagcccccaa
ggaagaattttggcaactgggggtgctgaccggaaattaaagttgtgggacattagtcgt
gcaacggtagaagccaaaggattactgactggcagtaatgcaggagtaacagctatagac
tttgatgcagaagaatcactcatccttggtgcttcaaatgactttgccagcagagtgtgg
actgttgttgatcatagattaagacacacactaactgggcattctggtaaagtaatggca
gcaagatttttatctgaatcggctaaagtggttacagggtcccatgaccgcaccttgaag
atatgggatctccggagtcgagcctgcattagaacaatatttgctgggtctagttgtaat
gatctggtaccatcggacagcgctgcaacaacgattatatcaggccattttgataagaag
attcgattttgggatacccgaactgaacaatcagcaaatgaggtaccacttcaaggaaag
attacttctctgtctttatcaagagatggattttatttactaagttgtgtgcgtgatgat
tcccttaaaatcttggaccttcggaaaaacaaagtggtacatacattcactggtgatggc
ttccatgtaggcacagactacacaagggcaacattttctcctgatgcaatgtatgttgca
gcaggaactggtgatggtgctgtctatatatggaatgttaatacaggcaagctagaaaag
acatttagggaacattcagcctgtgttgtggcatgcacttggcacccaagtggaaaatca
cttgtgtcctgcgatcgagctaaaaaggtcatagcctggtcagatttttaa
DBGET
integrated database retrieval system
