Homarus americanus (American lobster): 121858281
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Entry
121858281 CDS
T07477
Name
(RefSeq) polypyrimidine tract-binding protein 1-like isoform X1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
hame
Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hame03019
]
121858281
03041 Spliceosome [BR:
hame03041
]
121858281
Messenger RNA biogenesis [BR:
hame03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
121858281
Spliceosome [BR:
hame03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121858281
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_10
Motif
Other DBs
NCBI-GeneID:
121858281
NCBI-ProteinID:
XP_042210525
LinkDB
All DBs
Position
Unknown
AA seq
583 aa
AA seq
DB search
MKRPFSNNPPVCPISPATLPQDDDEEMLQVERGSDELLSQTGAVSNGSVMSPAPNHADNN
NDAKKVKLDTKNPGAPSRVIHIRNIPNEVTEAEIVHLGIPFGKVTNVLVLKGKNQAFLEM
SDEVCATTMVNYFTNCTAQLRGRAVYVQFSNHKELKTDQTHSNAQNPSAQAALQAAQALV
NQTDTQGGPNTVLRVIVEHMIYPVTLDVLYQIFSRVGKVLKIVTFTKNNTFQALIQYPDV
VTAQAAKMTLDGQNIYNACCTLRIEYSKLSNLNVKYNNDKSRDYTNPNLPTGDPALDSAL
AIGGAPGVLASPFAAMHGLSSPLTAAYGASPAGVSSLSAPNLNLPNRTGENATPTGMPFT
GMPLAGVTPTAAALGAAGIRLPGQPSPNCVLLVSNLNEEMVTPDALFTLFGVYGDVQRVK
ILFNKKDNALVQMSEPHQTQLAISHLDKMKTWGKQIRVTLSKHQTVQLPKEGQPDAGLTK
DYSNSPLHRFKKPGSKNYQNIYPPSATLHLSNIPPTVDEEQIKEAFTHAGASVKAFKFFP
KDRKMALIQLGSVEEAIAALIKMHNFQLSDSSHLRVSFSKSTI
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggcccttcagcaacaacccccctgtttgccccatctcccccgctaccctcccc
caagacgacgacgaggagatgctccaagtagagcgtggctccgatgagctgctgtcgcag
accggagcggtgagcaatgggtcggtcatgagcccagctcccaaccacgccgataataac
aatgacgccaaaaaggttaaattggacactaagaaccccggggcaccgtcccgcgtgata
cacatccgcaatatccccaatgaggtgaccgaggctgagatcgtccacttgggtattcct
ttcggcaaggtcaccaatgtcctcgtcctgaagggcaagaaccaggcgttcttagaaatg
tccgacgaagtgtgcgccaccacaatggtcaactacttcactaactgtaccgcccagctg
cgtggccgtgccgtctacgtccagttctctaaccataaagagctcaagactgaccagacc
cactccaacgcgcagaatcctagtgcacaggcggcgctgcaggcagcccaggccctggtg
aatcagacggatactcagggcggccccaacactgttctgcgcgtcatcgtcgagcacatg
atctacccagtcacccttgatgttctctaccagatcttctcgcgtgtcggcaaagtgctc
aaaatcgtcacgttcacaaagaacaatacattccaggccttgatccagtatcctgatgta
gttactgcacaggcagccaaaatgactctggatgggcagaatatctacaatgcctgctgt
acattacgcattgagtacagcaaactgagcaacctcaacgtgaagtacaacaatgacaaa
tcaagggactataccaaccccaaccttccaacgggtgaccctgccctggattctgccctg
gctattggtggtgcccccggtgtgctagcctccccgtttgctgcaatgcatggactctcg
tcgccgctaaccgctgcctatggggcctcacctgcgggagtttcttctctttcagctcct
aatctgaacttaccgaaccgtactggcgagaatgctactccaacaggcatgcccttcaca
ggtatgcctttggcaggagtaactcccactgctgctgctcttggtgctgctggtattcgt
ctgccaggccagccctctcccaactgtgtcctgctggtgtccaacttgaatgaagagatg
gtcacgcctgacgctctctttaccctcttcggagtgtatggagatgttcagcgtgtcaag
attctcttcaacaagaaggataatgccctggtccagatgtctgaaccacaccagacccaa
cttgcaatctctcatttggacaagatgaagacttggggtaagcagatccgagtgactttg
agcaagcatcagaccgtacagcttcccaaggaaggacagccagatgctggtctcaccaag
gactacagcaattctcctctccaccgtttcaagaagccaggctctaagaactaccagaac
atttacccccctagtgctactttgcatctgtccaacatcccacccactgtcgatgaggaa
caaattaaggaagcctttactcatgcaggcgcttctgttaaggcattcaagttcttccct
aaggacaggaagatggccctgattcagcttggttcagtagaggaagccattgctgcactc
attaaaatgcacaacttccagctgagcgattcctctcacctacgtgtgagtttcagcaag
agcaccatataa
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