Homarus americanus (American lobster): 121858692
Help
Entry
121858692 CDS
T07477
Name
(RefSeq) TATA-binding protein-associated factor 172-like
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
hame
Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hame03021
]
121858692
Transcription machinery [BR:
hame03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
121858692
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
TPR_Trm732_C
HEAT_EZ
HEAT_EF3_N
HEAT_2
Motif
Other DBs
NCBI-GeneID:
121858692
NCBI-ProteinID:
XP_042211205
LinkDB
All DBs
Position
Unknown
AA seq
2023 aa
AA seq
DB search
MSSRLDRLFLLLENGGSGVTRQAAAQQLGEVVRLHPHELNSLINRVHVYLSSKSWDVRIA
AGLAVEAIVSNVPQWNPQPLQVERGVSEEDCVKPSSGRLSLGTFNISHVLQKGSYLMAAD
EKLFEAEDENMPLNPADRLACQRRLVNQRLGLDIAEAMGIDTEGIFTNDDLAESPVEGTL
INGQGKENVMNIVKKEIKSAELALSSRELNRARRKAKLLAKQKSVDVSECVTDEGPEKKR
MRVASMVNQDPAGSDDDERMVVDEGPLGLNLGEEGCEWPLENFCEILATDLFSLAWETRH
GAATALRQVIKVHGRGGGKTTYHTKEQMEQNHQAWLEDMAVRLMCVLALDRFGDFVSDQV
VAPVRETCAQALGSILHLLSEGGVYGVLSLLETMLSWGDWEARHGGLLGLKYLLAVREDL
RTKLFTHTYPHIYKGLLDEMDDVVAVAASCLVPVADSVVNLQDKEVVMKLVATLWDALLD
IDDLTSSTNSILMLLAKLLAHPGNSDSVRSNLGELVPRLWPFLYHSSSSVRGSALKTLDT
LTAYTSPAKVSTDTVPLTSVVKEKSAKESHQIEKSEQKVTKDVEVKIENVEILTSSESIN
TKVDVENIEHKVSEAEKENNKLLDTERQSDKSVIRIKEEKVVDSVTTKSRDNGILSQVTR
DKEDINMESTIKTKKEVNAESLCKEENTEGDQTKQEMVPTKTEETTTAGSICSNKAVSDT
ESSKEMDVGSVKTTDSSCAWLCSIIQPALTHIYQRALLEKSTENLDMVFKIWRQMLANVS
LDYLLPAVCPMVSQWLYLTMANPKVPLDVSVLLIAHHNKSGEGRRLRGSALNDPTDKAEV
KFYLGSCDQFSDANNKQKSVIRARCAAAKLLGRLSQYVIKPMPGVEYPPEDTPVMCYVRI
LLAHLVSQSAVQRLGAGAVVREWASIYPNQECHPQLQSALQTCLTGVAYYDEIAVSFTKL
QEETRDFMAMLRHYKLPLDESFTSARVLTLEQIQNLSGHIALTLFSGGRLRPKVHATLEE
RRKTIQSSVSQTSTDQISLATTTQAVISGAVVRFRILPRNLNPVIKPLMDSIKKEKNEQL
QSLAAEDLTKLLELCIDRPTCPNGKVVKNLASFLCIDQECTPKIPQLEGVNAEDLYKGIL
SLSSQLKNAERQLLRRSSSVTGRGPGRPPGRPPANAKREDPAEVTEAILENENQRLTEIQ
RRGCTVALQRIAQYFGEDLPQKIPQLWDLICNPFTSPPEGDLTPETSQEAVNWFQLLEVV
VPALHTHLVAQLETKLHLLDHWLYHPYCAVRHMATRVMGALACVLTVPTLTYVVESIVPA
LGAIDNDGKRQGAVECIYAVIDRLGFSVVPYIVLLIVPLLGRMSDPDNSVRHMATYCFAT
LIRLLPLEGGVPDPPSLSEELLKQKMRERQFLEKLMDPTKIENYKVPVPINAELRSYQQN
GVNWLAFLNQYKLHGILCDDMGLGKTLQSICILAGDHYAKDQDEKAGCKRSTPFQSLVVC
PPTLTGHWVYEVEKFVKNRYLNPLHYTGPPTERYKLRRFFPDHNLIVASYDIVRNDIEFF
SQIRWNYVILDEGHIIKNGKTKSCKAIKQLIAHHRLILSGTPIQNNVLELWSLFDFLMPG
FLGTERQFMARYSKPILQSRDAKSSSKEQEAGVLAMEALHRQALPFLLRRVKEDVLSDLP
PKITQDYYCELSPLQEELYEDFARTQASQDINESLRSTDQGKDEQAPKHGHIFQALQYLR
KVCNHPKLVLKPRHPEYERISAKLKTCSLSMSDISHSAKLPALKQLLLDCGIGVDSGSVT
EAVVSQHRALIFCQLKAMLDIIENDLLKVHLPNVTYLRLDGSVPAGSRHALVQRFNGDPS
IDLLLLTTQVGGLGLNLIGADTVIFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRG
TLEEKIMGLQKFKMMTANTVISHENSSLLSMGTDQLLDLFTLDSGKGDTGHSNKEFAGGA
VTQALGVNAAGAKAVLENLPDLWDQNQYENEYDLDTFMVSLKK
NT seq
6072 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcagattggaccgactcttcttgctgttggagaatggaggatcgggcgtcact
cgtcaagcagcagcacagcagttgggtgaagttgtgcgtctccacccgcatgagcttaat
tcccttattaatcgtgttcatgtgtacctcagctcaaagtcatgggacgttaggattgct
gctggactcgcagttgaggccattgttagcaatgttcctcagtggaatcctcagcctctg
caggttgaacgaggtgtctcggaggaagattgtgttaaaccgtcgagtggtagattatcc
cttgggacattcaatatcagccatgttctccaaaaaggatcatatctcatggcagcagat
gaaaagctttttgaggcagaggatgaaaatatgccgctgaatccagcggaccgacttgct
tgtcagcgccgtcttgtgaaccagagacttggtctggatattgctgaggcaatgggaata
gacactgaaggtatctttaccaatgatgacctggctgagtctccagtggaagggacctta
atcaatggccaaggaaaggaaaatgttatgaacattgtcaagaaggaaattaaatctgct
gaattggctttgagttcaagggagttgaatcgggctcgaaggaaagctaaactgttagcc
aaacagaaatcagttgatgtatcggaatgtgtaactgatgaaggtccggagaagaaacgt
atgcgtgttgctagtatggtgaaccaagacccagctggcagtgatgatgatgaacggatg
gttgtggatgagggaccactgggtctcaacctcggggaggagggatgtgaatggcccttg
gagaatttttgtgaaatccttgctactgatttattcagtctggcatgggagacccggcat
ggggcagccacagcactcagacaagtgatcaaagttcatgggcgaggtggtggcaagaca
acataccacacaaaggagcagatggaacagaaccatcaagcttggttagaggacatggct
gtgagactcatgtgtgttttggctcttgatcgttttggtgacttcgtgtcagatcaagtt
gtggcaccagtcagagaaacatgtgctcaagctctgggtagtatcctgcacctgcttagt
gaaggcggtgtgtatggtgtgctctctctgctggagaccatgttgtcgtggggagactgg
gaggcccggcatggtggactgttaggtcttaagtacctcctggctgtgagagaagacttg
agaactaaactgttcactcatacctatccccacatttataaaggtttactggatgagatg
gacgacgttgtagctgtggctgcatcatgccttgtccctgtggcagacagtgtggtgaat
cttcaggataaggaggtggtgatgaagctggtggccacactctgggatgccttgttagac
atagatgacctgacatcttcaacaaattctatattaatgcttcttgcaaagttgttggca
catccgggtaacagcgacagtgtgagaagcaacttgggtgagctggttcctcgcttgtgg
ccgttcctgtaccacagtagtagctctgtcagaggctctgctctcaagactttggacaca
cttacagcgtatactagtccagccaaagtgtccactgatacagtgcctttgacaagtgta
gttaaagaaaagtctgcaaaagagtcgcatcaaattgaaaaatcagaacaaaaagtgact
aaagatgtggaagttaaaattgaaaatgtagaaatattaacaagtagtgaatcaataaac
actaaagtagatgtagaaaatatagaacataaagttagtgaagcagaaaaagaaaataat
aaattgttggatacagaacgacaaagtgacaaatctgttataagaataaaagaagagaag
gtggttgactcagtgaccacaaagagcagggataatggaatcttgtcccaagttaccaga
gataaggaagatattaatatggaatcaacaatcaaaacaaaaaaggaagtcaacgcagaa
tcactatgtaaagaggagaacactgagggcgaccaaacaaagcaagaaatggtgcctact
aaaacagaggaaactactactgcaggaagcatatgttcaaacaaagcagtgagtgataca
gagtcgtccaaggagatggatgttggatcggttaagaccacagattcatcatgtgcgtgg
ctttgttccatcatccagccagctctgacccacatataccagagagctctactagagaag
tccacggaaaatcttgatatggtgttcaagatctggaggcagatgctggctaatgtgtcc
ttggattatcttctgcctgcagtgtgtccaatggtttcccaatggctctatctcacaatg
gccaatcccaaagtgccattagatgtatcggttcttctcattgctcatcacaataagtca
ggagagggacggagattgcgcggtagtgctttaaacgacccaacagacaaagcggaggtg
aagttctacctggggagttgtgaccagtttagtgacgccaacaataaacaaaaaagtgtc
atcagggctcggtgtgcagcagcaaaacttcttggccgtctatctcagtatgttatcaag
ccaatgccgggtgtggagtatccacctgaggacactccagttatgtgctatgtgcgcatc
ctccttgcacatctcgtctcacagtcagctgttcagcgtcttggtgctggggcagtagtg
cgagagtgggcatcaatatatcccaaccaagagtgtcatccacagctccagagtgctctt
caaacttgccttactggagttgcctactatgatgaaattgctgtttcatttaccaaatta
caggaagagacccgggatttcatggcgatgctgcggcactacaagctccccttggacgag
tcattcacatcagctcgcgtcctgacattagaacagattcagaatctcagtgggcacatt
gcacttactttgttttctggaggtcgtctgaggcccaaggttcatgccacactagaagag
agacggaagaccattcagagtagcgtctcccagacctccactgatcaaataagtttagct
acaacgactcaagcagtaatctctggtgctgttgtgaggtttagaattctaccacgtaat
ctcaacccagtcatcaagcctctgatggacagcatcaagaaggaaaaaaatgaacagcta
cagagtctggctgcagaggatcttactaagcttcttgagttatgtatagatcgacccacg
tgtccaaacggtaaagtagtgaagaatcttgcatcattcctgtgtattgatcaggagtgc
actcccaagatacctcaactggagggtgttaatgctgaagacctatataaaggcatactc
agcttatcttcacagttaaagaatgctgagcgccaacttcttcgacgtagttcttcagtg
actggtcgaggacctggcagacctcctggccgcccaccagccaatgcaaagcgtgaagat
ccagctgaagtaactgaagctattcttgaaaatgagaatcaacgattgactgagattcag
agacgtggttgtacagttgcccttcagcgaattgctcaatacttcggggaagacttgccc
caaaaaatacctcagctctgggacttaatctgcaacccattcacatcccctcctgaaggt
gacctaactccagaaacttcccaagaagctgttaactggttccagctcctagaggtggtt
gttccagcacttcatacccacttggttgctcagctggagacaaagctccacctgctggat
cactggctgtatcacccctactgtgctgtccgccacatggccactcgagtgatgggagcg
ctggcctgtgtgctcactgtgcccactctcacctatgtggttgagagtattgtacctgct
cttggtgccattgataatgatggcaagagacaaggggcagtggagtgcatttatgctgtc
attgatcgacttggattcagtgttgtgccttacatagtcctccttattgtgcctttatta
ggtcgcatgagtgacccagataacagtgttcgtcacatggccacatactgctttgcaacg
ttgatccgacttctgcctctggagggaggtgttccagatcctcccagtctgagtgaggaa
ctgttgaagcaaaagatgcgggagagacagttcctggagaagcttatggatcccactaag
attgagaactataaagttcctgtgccaatcaatgctgagctgagatcatatcagcaaaat
ggtgtgaactggttggcatttttgaatcagtataaactacatggaatattgtgtgatgac
atgggtctggggaagacacttcagtccatctgcatccttgctggtgatcattatgctaaa
gaccaagacgagaaagcaggatgcaaaagaagtacacccttccagtctcttgtggtgtgc
ccacccaccttaacgggtcactgggtgtatgaagttgagaagtttgtgaagaatagatat
ttaaaccctctacactacactggcccaccaactgagagatacaaactgcggcgcttcttt
ccggatcataacttgattgtggcctcttacgacattgtccgtaatgacattgagttcttc
tcacaaattagatggaattatgtcatactggatgaagggcacatcatcaagaatggcaag
acaaagtcctgtaaagccatcaagcaacttatagctcaccatcgcttgattctctctggt
actcccatccagaacaatgtattagagttgtggtcactctttgacttcctcatgcctggt
ttcttgggtactgagagacagttcatggcacgttattctaagccaattctgcagtcccgg
gatgccaagagctccagcaaggagcaggaagcgggagttctggcaatggaagcgttacat
cgtcaggcacttccatttttactgaggagagtaaaggaagatgtgcttagcgacttacct
cccaagattacacaggattattattgtgaactgagtccactacaggaggaactgtatgaa
gattttgcacgtacacaagctagtcaggacattaatgagtcactcagaagcacagaccaa
gggaaggatgaacaagcaccaaaacatggccacatattccaagcactacagtatctacgt
aaagtgtgtaaccatcccaagctggtgctgaagccccgtcacccagagtatgaacgtatc
tctgccaaactaaagacctgtagtttatcaatgtctgatatctcccactcagccaaactt
ccagcacttaagcagctgctcctggactgtggtattggggtggacagtggatcagtaaca
gaagcagttgtgtcccagcaccgagctctcatcttctgccagctgaaggccatgctggac
attattgagaatgatctgctcaaggtacatcttcctaatgtgacatatttaaggctggat
ggttcagtgccggcaggatcaagacatgcacttgtccagaggttcaatggagatccatcc
atagatcttttactcctcacaacacaagttggtggacttgggcttaatctgattggtgct
gacacagtgatctttgtggagcatgactggaacccaatgagggacctgcaagccatggat
cgtgctcaccgtatcggccagaagcgtgtggtgaatgtgtacagacttatcactcgagga
acccttgaagaaaaaattatggggttacagaagttcaagatgatgacggcaaacacagtg
atcagtcatgagaattcaagtctactcagcatgggaacagatcagcttctggacttgttc
actctggattctggcaagggtgacactggtcacagcaacaaggagtttgctggtggtgct
gttacacaagcacttggagtgaatgctgcaggagccaaagctgtgttagagaatttacct
gatctatgggatcaaaatcagtatgaaaatgagtatgaccttgacacatttatggtttct
cttaagaagtag
DBGET
integrated database retrieval system
