Homarus americanus (American lobster): 121859249
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Entry
121859249 CDS
T07477
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
hame
Homarus americanus (American lobster)
Pathway
hame03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121859249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hame03021
]
121859249
03036 Chromosome and associated proteins [BR:
hame03036
]
121859249
Transcription machinery [BR:
hame03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
121859249
Coactivators
SAGA/TFTC/STAGA complex
121859249
Chromosome and associated proteins [BR:
hame03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
121859249
STAGA complex
121859249
TFTC complex
121859249
SAGA complex
121859249
SLIK complex
121859249
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML_2
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_DCAF4
WD_LRWD1
Beta-prop_WDR19_1st
eIF2A
Beta-prop_Nup120_160
Beta-prop_WDR75_2nd
PROPPIN
DNA_processg_A
Cytochrom_D1
WDR54
Motif
Other DBs
NCBI-GeneID:
121859249
NCBI-ProteinID:
XP_042211932
LinkDB
All DBs
Position
Unknown
AA seq
741 aa
AA seq
DB search
MVNMSDAGGPTYASLTQANPTIINGLAGVDLQTGHQAMMNHTDHTMMNMMNTVGVQGTAV
QTMPTQNLATVMPAPSHQQAAPDVKPDTMGDATVSVDRNTLMAVLQFLKKNNMKRSEDLL
RQEANFYESVEDSKQGIGGDAEVSSVLSAYKSEGDPAEYEDAYKGLQAFIEKSLDAYKHE
VSQVLYPVFVHMYLELVFNGHEEVAKSFLQKMGNVQEHCYREDIHKLSLVTTRDHMTGYQ
IMDNFRSNQFTVRMSRDTYSHLKRYLTEFGGGPVPRIIHDRLYLDVYEGVPRTRTQVLAT
AGAQEGEAPKQVNKTKIFYGLLKEPELPNLPMEEEEGEEEGDKPKKKKPKKDALQKSKKN
DPNAPPSNRIPLPELREIDYLEKAKAFRDALKRVVLSKDTLPSICFYTFLNASGNITSVD
ISDDSSMLAYCTSDSQVRVQSITPSKLRCMKSAEQLNDIDKDADDVLVRMMDDRTAEPVR
TLLGHSGPVYACCFSPDRNLLLTGGEDGTIRLWSMQTWTCLVVYKGHVFAVWDVSFSPYG
YYFVSGGHDRTGRLWATDHHQPLRIFAGHFSDVDVVQFHPNSNYVASGSSDRSIRLWDCQ
SGNCVRVLTGHKDVIDTLAFSPCGRFLASAGGDKRILVWDMSHGHLIAEMASHTSTIYTI
AFSRDCNILASGGMDNCVKLWDFSRVLEDNHEDDINVSNNPDIKRCNESLLLGTFPTKNT
PVLATHFTRRNVLLAAGPFEG
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggtaaacatgtcagacgcgggagggcccacctatgccagcctaacacaggccaaccct
actatcattaatgggttggctggggtggaccttcagacgggtcaccaggcgatgatgaac
cacacggaccacacgatgatgaacatgatgaacacggtgggggtccaaggcacggcggtc
cagacaatgccaacacaaaatttagcaacagtaatgccagctcccagccaccaacaggcc
gctcccgatgttaaaccagacaccatgggggatgctaccgtatctgtggataggaataca
cttatggcagtgctgcaattcctgaaaaaaaataatatgaagagatctgaagacctcctg
aggcaagaggctaatttttatgagagcgtagaagattcaaagcaaggtattggtggtgat
gctgaggtgtcaagtgttctgtctgcctataagagtgagggagacccagcagagtatgag
gatgcctacaagggtcttcaagcctttattgagaagagtttggatgcttataagcatgaa
gtatcccaggtactatacccagtcttcgtacacatgtatttagaactggtttttaatggt
catgaggaggtggccaaatcattcctacagaaaatgggtaatgtgcaagaacactgctat
cgtgaggacattcacaaactctctctggtaactacacgggaccatatgacaggataccag
attatggataacttccggtcgaaccaattcacagtgaggatgtcccgtgatacttattcc
catttaaagcgatacttgacagaatttggcggaggaccagtgcctcgcattattcacgac
agattgtacctggacgtgtacgaaggtgttcctcgaacccgaacacaggtgttggcaact
gctggagcacaagagggagaggcaccaaagcaagttaataaaaccaagatattttatggt
ctgctcaaggaaccagaactgcctaacctcccaatggaagaggaagaaggagaggaagaa
ggggataaaccaaagaagaagaagccaaaaaaagatgcacttcaaaagagcaagaagaat
gacccaaatgctccacccagcaacagaataccattgccagaactgcgtgagattgactac
ttggaaaaggccaaagctttcagggatgcactgaagagagtggtgctaagtaaggacaca
cttccatcaatatgtttttacacctttttgaatgcttcagggaacatcacatcagtggat
atatctgatgactccagcatgttagcttactgtacatcagactcacaagttcgggtgcag
agcatcacgcccagtaaactacgatgtatgaagtctgctgagcagctgaatgacattgac
aaagatgctgatgatgttcttgtacgaatgatggacgatagaacagcggaaccagttcgt
actctccttgggcattcaggaccagtgtatgcctgctgcttcagccctgaccgtaacctg
ctgctcacaggtggagaggatggcacaattcgtttatggagtatgcagacatggacgtgt
ctggttgtctataaaggtcatgtgtttgctgtatgggatgttagtttctccccttatggc
tactactttgtctcgggcggccatgatcgaactggtagattatgggcaacagaccatcat
cagcctcttcgaatatttgctggacatttctctgatgttgatgttgtacaattccaccct
aatagcaattatgtagcatcagggtccagtgatcgcagcatcagactttgggattgccaa
agtggaaattgtgtgagagttctcacaggtcataaggatgttattgatactttggcattt
tctccatgtgggcgtttcctggcatctgctggtggggataagcgtattttggtatgggat
atgtctcatggccaccttattgcagaaatggcatcacacacatcaacaatttatactatt
gccttttcaagagactgtaatattcttgcatcgggtggaatggacaactgtgttaaactg
tgggatttcagtcgtgttcttgaagataatcatgaagatgatataaatgtgtccaacaac
ccagacatcaaacgctgtaatgagtctctgctgcttggcacttttccgacaaaaaatacc
ccagtgcttgcaacacactttacaagaagaaatgtgctactggctgctggaccgttcgaa
ggctaa
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integrated database retrieval system
