Homarus americanus (American lobster): 121859489
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Entry
121859489 CDS
T07477
Name
(RefSeq) chromatin assembly factor 1 p55 subunit isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
hame
Homarus americanus (American lobster)
Pathway
hame03082
ATP-dependent chromatin remodeling
hame03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121859489
03083 Polycomb repressive complex
121859489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hame03036
]
121859489
Chromosome and associated proteins [BR:
hame03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
121859489
Histone modification proteins
HAT complexes
HATB complex
121859489
HDAC complexes
Sin3A-HDAC complex
121859489
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
121859489
PRC2.2
121859489
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
121859489
Heterochromatin formation proteins
Other heterochromatin formation proteins
121859489
Chromatin remodeling factors
NuRD complex
121859489
NuRF complex
121859489
NuRF complex (fruit fly)
121859489
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
WD_LRWD1
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
eIF2A
Beta-prop_DCAF12
WD40_MABP1-WDR62_1st
NBCH_WD40
PEP5_VPS11_N
Beta-prop_RIG_1st
Beta-prop_SPT8
Beta-prop_NUP159_NUP214
Beta-prop_IFT80_2nd
AftA_C
Motif
Other DBs
NCBI-GeneID:
121859489
NCBI-ProteinID:
XP_042212257
LinkDB
All DBs
Position
Unknown
AA seq
498 aa
AA seq
DB search
MTDKEGAKGKHTTTTRTTKCQREKWCLESRTAPSYSGTLSINLGDGGGPAPVRAAPDLPT
TVAVAEVTPVQRLQDTFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLP
DVTRPEGKDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNEKGEFGGFGSV
SGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPSGECHPDL
RLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE
DVAWHLLHESLFGSVADDQKLMIWDTRANNTNKPSHTVDAHTAEVNCLSFNPYSEFILAT
GSADKTVALWDLRNLKLKLHSFESHKDEVFQVVQVQWSPHNETILASSGTDRRLHVWDLS
KIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENI
YNDEEPETPASELESGAS
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaaagagggagcgaagggtaagcatacaactactacaagaactaccaagtgt
cagagggaaaaatggtgcctggaatcaagaacagcaccgtcatattctggcactctttcc
attaacttaggggatggtggtggccctgcgcctgtgcgtgcggcaccagacctcccgaca
accgtggctgtggcagaggtaacacctgtgcaacgtctgcaagacacatttgatgatgca
gtggaagagcgtgttatcaatgaagagtataagatatggaaaaagaacacacccttcttg
tatgaccttgtgatgactcatgccctagagtggccatcacttacagcacaatggctccct
gatgtcacaagaccggagggcaaagactacagcattcataggctgatccttggtacacac
accagtgatgagcagaaccatctgcttattgcctcagttcagcttccaaatgaagatgcc
cagtttgatgcatcacattatgacaatgagaaaggcgagtttggaggttttggatctgtc
agtggaaagattgagatcgagataaagataaaccatgaaggagaagtaaatagagctcga
tatatgcctcaaaatccatgtgtcattgccactaagaccccttctagtgatgtgcttgtc
tttgattatacaaagcatccatcaaagcctgacccatcaggagaatgccatccagattta
aggctccgtggtcaccaaaaggaaggttatggcttatcgtggaaccccaacctgaatggc
tatctccttagtgcttctgatgatcacaccatttgcttgtgggatattaatgcaactcca
aaagaaaacagagttattgatgctaagactatcttcacaggacacacagcagttgttgag
gatgtggcgtggcatcttctacacgagtcactctttggttctgtggcagatgatcagaag
ctcatgatctgggatacacgagctaacaacacaaataaaccttcacacacagtggatgcc
cacactgctgaggttaattgtctttccttcaatccctattcagaatttatcctagctact
ggcagtgctgacaagacagttgccttgtgggacctgcgcaatctcaagctgaaactccac
tcatttgagtcgcacaaagatgaggttttccaggtggtacaggttcaatggtcacctcat
aatgagacgatcttggcaagttctggcactgaccgtcggctgcatgtatgggaccttagc
aagatcggtgaagaacagagtgctgaggatgcagaagatgggcctcctgaattattgttc
attcatggaggtcatactgccaagatttctgatttttcatggaaccccaatgaaccctgg
gttatctgttcggtcagcgaagacaacatcatgcaggtgtggcagatggcagaaaatatt
tacaatgatgaagaaccagagaccccagcatctgaacttgaatccggtgcatcttaa
DBGET
integrated database retrieval system
