Homarus americanus (American lobster): 121860132
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Entry
121860132 CDS
T07477
Name
(RefSeq) probable methyltransferase TARBP1 isoform X1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
hame
Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hame03016
]
121860132
03036 Chromosome and associated proteins [BR:
hame03036
]
121860132
Enzymes [BR:
hame01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
121860132
Transfer RNA biogenesis [BR:
hame03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
121860132
Chromosome and associated proteins [BR:
hame03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
121860132
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
Motif
Other DBs
NCBI-GeneID:
121860132
NCBI-ProteinID:
XP_042213099
LinkDB
All DBs
Position
Unknown
AA seq
1597 aa
AA seq
DB search
MAAELLRLGLLDDQQYHMLLKKLINDTEFSVITCEILIKAVEAKEGANKSSVDVSQDVEL
YNLYQELLEHCLLPRLHKIIGNYSYAVQNNHYLLPHVRDAEKNKSSLLSLDDLLSQDHNL
NDQELEESSDKLLRDDELILVPKLSRIIVVIMKMVSGLSKSQIHTGNSDVIDGDSLDKKS
ITSLKTIFEGISQNLPVRHLDAVVDEEHHKVKVLSLIFANLLKDGWCLRHCSLRRASRIV
LDVSLAVIKASPDADITALLLMLIIQPFLDFKNDDKNEVIHKLWHIVKNFYIVDGNFITV
EKNTTGFLILCFMATHMFEDGCFSLIGGDDILWKIIQFGLVHTNPLSRKRCQYVLKRSVD
YFSSESITKLKSEYISWPRDKNDEVIRFWNDFFLLVESLEEKQAHVVRPVLEKLDHLINM
CCSTEHIFHISWTLVIFKRIFDQDNKNIKQWGLMKILRLKLSQEVLVKGVLFFVRLHVLP
ALSDYCLYSRDAGQRPRTPSTVGDQLVLFLENIIVSLDVTQQKYFMCSLLETLFDGRAWG
GIPLFYLIRGLSLMPKTAVWSFKVVKSAVSNFEGCLSTQEVVLRSASQCDLLKAVFKHLV
PEVTFLEICDIVGHFRRKESWCRGTVLWNTIIKELDTFQETWQNRFLLIELAINKSLSSS
ETIHPHDIALGVNLLLDSNSLPDDVPERSCVIALLNPLSNFLRDCHIRPYLDHKKLTWVM
EMLTQTLEIFTDVPSDCPQRPDKSGKHVSCLVEGIDCIAQLFIREIRRYNQPYDIEIISH
YLSLFTQCRNLENLKDVLNVHYPELLQVCHVLLGQDNAVKNAFGVLLLEHLLAQYYGNTS
SVIKEDMMNLVYEKVICNIEKVTPRRQIDGYNSTEFTSKLLLETTRSRWCCVWLLVQQSV
SLKEEEYVRWRKIKTATISALPSAANAAGTMNVLLVFQLAVSLSPSIIENGMWEELTKVM
WDSSREFRKGCDLYRSLIGCVTDLLFYEDAITKPECHGFIIQMSQWMRVTGIVVQGIASH
MSRSLVTSLVKIQKKALVDPTPYRDIIQDILVPLLMFGSVFRKQYKVIHDTTEFIQDCGR
LYSTNSLIESDHDADSRARAIALRYLLTLDKEKPKDRNWALVVAEGIKTQYTCCTGERRD
FANSQKHRYKTRLLQAFLLILPLLDKSECSKDLAWLCKGLIKDHQQPSVRYLQEWGVSLI
TILHPQLFPDLLSHFLQGTKERVGCVGSFLAALTHVACTSEDDEVLCQSLQYTLPWCMAQ
HFNTRLYAQVSLRKMWHHCEAKQVTAVLRRYEPVQQCLQFVVEHGNSARNTLNMLNDFYF
KVFHPIQHYTLETILHDLPCLSLLADDEWLTIDFFLGVMDTQDLPLCGDLPLHNADQVLA
ESLPAPWVIKAAGDTSPVEDKDGPSESTNNVQRKITPWKSMVPEITASLDLPEQPETHPS
RGALIVVASLIDKPPNLGGLCRTCEVFSVKEYIVPSLSILEDPTFNSLSQTAQQWVPMKE
VKPDCLAHYLRTLQNEGYTLVAAEQTANSIKLSEYSFPERTVVILGNEREGIPCELLQLL
DVCVEIPQTGIIRSLNVHVSGALFIWEYTRQHLKKLA
NT seq
4794 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgaactgttgcgtttgggattactagacgaccaacagtaccatatgttattg
aagaaactgataaatgatactgaattttctgttattacttgtgagatacttataaaggct
gtagaagctaaagaaggagctaataaatcttccgttgatgtctcacaagatgtagaattg
tataatttgtatcaggagttattagagcattgtctcttacctcggctacataagataatt
gggaattattcttatgctgtgcagaataatcattatctgcttcctcatgttcgtgatgca
gaaaaaaacaaatcaagtttattatcattggatgacttgctctcccaagatcataatttg
aatgaccaggaacttgaagagtcatcagataagctgttgagggatgatgaacttatactg
gtgccgaaactatcacgaataattgttgtaataatgaagatggtctcaggcttatcaaaa
tcacaaatacatactggaaatagtgatgtaattgatggcgattccttagataaaaagagt
atcacttcgctaaagacaatattcgagggtataagtcaaaaccttcccgtgcgtcacctt
gatgcagtcgtagacgaagagcatcataaagtgaaggtgttgtcactaatatttgccaat
ctgttgaaggatggctggtgtttacggcactgcagtctccgtcgggctagccggatagtt
ttggacgtgtcgctggcggtgattaaagcgtctcccgatgctgacataactgcactcctt
cttatgttgattatccagccattcttagactttaagaatgatgacaagaatgaagttatt
cacaagttatggcacattgttaagaacttttatattgttgatggtaacttcataacagtg
gagaagaatacaacagggttcttgatactctgctttatggcaactcatatgtttgaagat
ggatgtttctctctaattggaggtgatgatatattgtggaagattattcagtttggcctt
gttcacaccaacccactgtcaagaaagagatgtcaatatgttctcaaaagatccgtggat
tatttttcgtcggagtcaataacgaaacttaaatcagagtatataagttggcctcgggat
aaaaatgacgaggtaataaggttttggaatgatttctttctcctcgttgaaagtctggag
gagaagcaagcccatgttgtaagacctgtcctggaaaagttggatcatttaattaatatg
tgttgcagtactgaacacatatttcatatttcctggactcttgtaatattcaagaggatt
tttgaccaagataataagaatataaagcaatggggattaatgaagatactgaggttaaag
ttatcacaggaagtactggttaagggtgttctcttctttgtaaggttacatgtactgcct
gcactaagtgactactgcctttactctcgtgatgcaggtcagcgcccacgaactccctct
actgttggggaccagcttgtattatttttagagaatatcattgtgtccttggatgtaacc
caacagaaatactttatgtgctctctcttagaaactctttttgatggaagagcttggggt
ggaatacctttgttttatctcattcgaggactgtcactcatgccaaaaactgctgtttgg
agttttaaagttgttaagagtgctgtctctaattttgagggctgtcttagtacccaggaa
gtagttttacggtcagcaagtcagtgtgatcttttaaaggcagtatttaagcacctggta
cctgaagtaacttttcttgaaatttgtgatattgtaggtcattttagaaggaaggaaagt
tggtgtcgaggtacagtcctgtggaacaccattattaaggagcttgacaccttccaggaa
acttggcaaaatagatttttattaattgaattagccattaacaaaagcctctcttcctca
gaaactattcatcctcatgatattgcactgggagtaaatctgcttcttgatagcaattca
cttcctgatgatgtaccagaaagatcttgtgtcattgccttattaaatccattaagtaat
ttcttaagggactgtcacatacgaccatacctggaccacaagaagctcacgtgggttatg
gagatgttaactcagacactagaaatatttactgatgttccttcagactgtccacagagg
cctgataagtctggtaaacatgtgtcatgcttggttgaaggtattgactgtatagcacaa
ttatttatcagagagatcaggaggtacaaccagccttatgatattgaaataatatctcac
tacctaagtttatttactcagtgtagaaacttagaaaacctgaaagatgtattaaatgtg
cactacccagagctacttcaggtatgccatgttcttctaggtcaagataacgctgtcaag
aacgcctttggtgttcttctactggaacatttattagcacagtattatggtaatacatca
tctgtcattaaagaagacatgatgaatcttgtgtatgagaaggtcatctgtaacatagag
aaagtaactcccaggagacaaattgacgggtataattccaccgagtttacgtcaaagctg
ctgctggaaaccactcgtagtcggtggtgttgtgtgtggcttctggtgcaacagagtgta
tcactgaaggaagaagaatatgtgaggtggagaaaaataaaaactgctacaatatctgct
ttaccatctgctgctaatgctgctggaacaatgaacgtgttgctcgtgtttcaattagct
gtcagtttatcaccttccataatagagaacggaatgtgggaggagctaacaaaggtcatg
tgggactcatctcgggagtttcggaagggttgtgacctttaccgatcgctcattggctgt
gtcactgatcttctcttttatgaggatgccataaccaagccagagtgccacggattcatt
attcagatgtcccagtggatgagggttactgggatagttgttcaagggattgcttctcac
atgtccaggagtttggtcaccagtttagtaaaaatccagaagaaagcccttgtggacccc
acaccttatagagatataatacaagacattcttgtacctttactgatgtttggcagtgtt
tttcggaagcagtataaagttatacatgacacaacagagttcatccaagactgtggacgg
ttatacagcactaattcactcatagaaagtgatcatgatgctgactcaagagctcgtgca
attgccttaagatatctgctgacattagataaagaaaagcccaaggacagaaactgggct
ctggtggttgcagaaggaataaaaacccagtatacttgttgtacaggagaacgcagggat
ttcgccaattcacagaagcacagatacaaaacaagactcctgcaagcctttcttttgata
cttccactattagacaagagtgaatgttccaaagacctggcgtggttatgcaaaggtctg
atcaaggaccaccaacagccgagtgttcgctacttgcaggagtggggcgtgtctctcatc
accatactccacccacaactctttcctgacctcctttctcacttcctccagggcaccaag
gaaagagtcggatgtgttgggtcgttcctggcggccctgacccacgtggcctgtacctca
gaggatgatgaggtgctgtgccagtctctgcagtacactctaccgtggtgcatggctcaa
cacttcaacacccgactgtacgctcaggtatcactgaggaaaatgtggcatcactgtgaa
gctaaacaggtgacggcagttttgaggagatacgaaccagtgcaacagtgcctacagttt
gtggtagaacacggcaactctgcgagaaatactctcaacatgctcaatgatttctacttc
aaggtgtttcatcccattcaacattacactctggagacaattcttcatgacttgccgtgt
ctatctttgctggcggatgatgaatggttgacgatagatttcttcttaggagtcatggac
acacaggaccttccattgtgtggtgacctgccccttcacaacgctgaccaagtcctggct
gagtcactacctgcgccttgggtgatcaaagctgcaggagacacttctccagtagaagac
aaagatggccctagtgaatccacaaacaatgtgcaaaggaaaatcactccctggaagtcg
atggtcccagagattactgcatcactggatttacctgaacagcctgaaacacacccgagt
cgaggagctttgatcgtagtggcttctctcattgataaaccaccaaacctcggagggttg
tgtcgaacttgtgaagtgttcagcgtcaaggagtacattgtgccgtcccttagtatcttg
gaggacccaacgtttaactccctgtctcaaacggcccaacagtgggtgcccatgaaggag
gtaaagcctgattgtcttgcgcattacctgagaactctgcaaaatgaaggttacacatta
gtggctgctgagcaaaccgcgaatagcattaaactgtccgagtacagcttcccagagagg
acagttgtgattctagggaatgaaagagaagggatcccatgtgaactgcttcagctgctt
gatgtgtgtgtggaaatccctcagactggcatcattcggtctctcaacgtacatgtgtcc
ggcgctctcttcatctgggaatatactcggcagcatctcaagaagctcgcctag
DBGET
integrated database retrieval system
