Homarus americanus (American lobster): 121860491
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Entry
121860491 CDS
T07477
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12-like isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
hame
Homarus americanus (American lobster)
Pathway
hame04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121860491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hame04121
]
121860491
Enzymes [BR:
hame01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
121860491
Ubiquitin system [BR:
hame04121
]
Ubiquitin ligases (E3)
HECT type E3
121860491
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
WWE_5
Motif
Other DBs
NCBI-GeneID:
121860491
NCBI-ProteinID:
XP_042213588
LinkDB
All DBs
Position
Unknown
AA seq
2119 aa
AA seq
DB search
MAERGEGTAGGSHSQATTSGAHTAATRNRNQLVGSVVEGLEAFGSPLPLRKRKIGITEVV
HTKRRSSDGPQEPSGGFSSITSNTAGAGGTASKRQRYTSNSSNSDARYADSGDCGDCGLE
SPASKRQRRSSHVESRSNSAASLAANAPSTTTRNQAALVDTEKSPGGGGILKSYPLRNRL
RLSDGGGGGGGGSGGSNPLTAGRLEQQGQSQSLPSSPSSQGVAFLADTFRRLRESRRSSQ
EQSATSKRNATQTKDSRQSGGTWKRTHGTKKSPLSSKRSSRSKTNNTGSCASSSQHSSRG
CGKVSFGSSGSGMSGSHGGHEGSSTSSSGPPQSSPHGACSTTGTPGTSSLTGVPPATTTA
SAALHAAPSTSTTSGLLPTASLATLGAIGGGSSSGASGGGLAGSIGGLMGAPTDSESEEN
EMGRLETLLASRGLPPSLFGALGPRMQHILHRSVSSSINSKAQQLLVGLQANGEESEQLQ
AVIEMCQLLVMGNEDTLAGFPTKQVTPALINLLNMEHNFDMMNHACRALTYMMEALPRSS
AVVVDAVPVFLEKLQVIQCMDVAEQSLTALDMLSRKHSKAILQAHGVSACLTYIDFFSTG
AQRAALSITANCCQNLTADEFHFIAESLQLLSTRLTSQGDKKCVESVCLAYSRLVDCFQN
DPNRLQEIAGPGLLSNIQQLLVMSPPVLNSGTFIMVIRMLSLMCNNCPELAVQLLKNNIA
HTLCYLLTNSTEPPGEQVELVSRSPQELYEITCLIGELMPMLPSDGIFAIDGALQRPSGC
AQDTVMWQWQDERNTWQNYSTSDSRIIEHSHQSGEDEISLCIQGRAYTIDFHSMQQINDN
SGNMRPVQRRMVPVGLGGTVLTATQATDARAKCLREDSELASNLIRSLFSLLYEVYSSSA
GPAVRYKCLRALLRMVQFSSPDLLQQVLKSQSVSSHLATMLSSQDLKIIVGAIQMAEILM
LKLPEIFAIYFRREGVMYQIKRLCNPNATLGAPTAKWSSPELSLGSGRGGTPNSASPLLT
GRPFNGNCLDSTPSLPTPPSQDDDKLQSPSQLRLYDVLKRKRTARMRSGNSRKNRQEDSS
PSSSFSEFFMKNAGLGGGRDTWKVASRNNSSNSTTSGGSSKSSFLANFNPTRWGRCNPAT
STPSHESPAGKGFFILEYQQDKLVSNNVSSGSSSNNKEVVRVWVREQAERLNQQFFSNEL
TVQGAYHPALSVLNRLMTALRQLEKELQPNCAVEALREISRIVSESDISPFEVIHSGLVR
SLLTYLTATENSTLTLSFTHDGAILTSMGGLGSSSENGSLTAPVNISTPRETRLRNFLHV
FLGCTLNPLSLGTVDTSHIALFSALVTKLNGCVNQLEQFPVKVHDLPGTALSGLGRGGST
SAIKFFNTHQLKCNLQRHPDCTRLRQWRGGPVKVDPLALVQAIERYLVIRGYGRLRDEDD
DNSDDDNSDEDIDDTLAAVSVNQSSSSHKLQFVINEHVLPYNMTVYQAIRQFSSPSDASA
SEADTDTETPVSHSAIWLQTHTIYYRPVQEEEQSRSSGGRKGKAGGSKTSPKKKADTHVG
DGSIVGGNNSVLDQYLTFNLPASVTVFDPSIEVLALLRVLHALNRHYGSLYPPACYPSPL
PTAEFTNLKLTAKANRQLQDPLVIMTGNVPPWLPQIAYVCPFLFPFETRQLLFYAVSFDR
DRALQRLMDSSPELNSVDSSERVTPRLEKRKRTVSRDDILKQAESVISDLASSRAMLEIQ
YDNEVGTGLGPTLEFYALVSKELQKADLELWRGETVTVEERTEDNPGKAVKYVNASNGLY
PLPVPRNMKSAHMTKLRTKFRFLGKFMAKAVMDSRMLDLGLHECVYKWLLSEEWSLGLGD
VTSLDPTLGHTLDRLHSTVLQKRRVVVQAEQEGISGAELQGRLDALTVDGCSVEDLALTF
TLPGYPNIEFRKGGSDISVTINNLDQYLQLVIEWLVREGVRRQMEALREGFECVFPLTQL
HVFYPEELEQLFCGSSDVSQWDMKQLAECCRPDHGYTHNSRAVKFLLQILSEYTPAHQRS
FLQFVTGSPRLPVGGFRSLTPALTIVRKTFEAGENPDDFLPSVMTCVNYLKLPDYSSIDI
MRAKLEIAAREGQHSFHLS
NT seq
6360 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcgcggtgaggggaccgcaggggggtcacactcacaagccaccaccagtggg
gcccacactgcggcaaccaggaatagaaatcagctggttgggtcagtagtggaggggttg
gaggctttcgggagtcccctacccctacgcaagcgcaagattggtatcaccgaggtggtg
cacacaaagaggagaagcagcgacggtccacaggaaccctcgggaggatttagtagcatt
acgtccaacacagcaggtgcaggtggcaccgcgagcaagaggcagagatacaccagcaac
agtagcaacagtgacgcacgttacgcagatagtggcgattgtggcgattgtggcttggag
agcccggcaagcaagcgtcagcgccggagcagtcacgtagagagccggagcaattcagct
gccagcctggccgccaacgcacccagcacaaccactcggaaccaggcagcattggtggac
acagaaaagtcgcctgggggtggtggaatactaaaatcatatcctctgcggaaccgactg
cgtctgagcgacggtggtggaggaggaggtggaggtagcggtggaagtaacccgctcact
gctgggcggctggagcagcagggtcagtcacagtctttgccgtcatcaccatcgtcccaa
ggtgttgccttcttggccgacaccttcaggaggctgagagagtcacgacgatcgtcacag
gaacaatctgcgaccagtaaacgaaacgcgacgcagactaaagattctagacagtcagga
ggaacttggaagagaacgcacggaacgaaaaaatcgcccctttcttctaaacgtagcagt
cgcagtaaaaccaacaacacggggtcgtgtgctagtagcagccagcactcgtcgagaggg
tgcgggaaggtgagctttggcagcagtggctcaggcatgtctgggtcacatggtggccat
gagggttcgtccacatcatcatcaggccccccacagtcctcgccccatggtgcttgctcc
accacaggtactccaggaacctccagcttaactggagtaccaccagccaccaccacagcc
tctgctgctcttcatgcagcaccttccacctccaccacctctggcctgctacctacagcg
tctctggctacgctaggagccataggtggtggaagtagcagtggagcaagtggtggaggc
ctagctggcagcattggaggactcatgggtgcacctacagatagtgaaagtgaggaaaat
gagatgggacggttagaaactctgttggcatcgcgtggtcttcctcctagcctgtttggg
gcattaggacctcgcatgcaacacattttacatcgctcagtttcttcttccattaattcc
aaagcccagcagctccttgtaggcctgcaggcaaatggagaggaaagtgagcagcttcaa
gcagtgatagagatgtgtcagctgctagtaatgggcaatgaagacacactggcaggcttc
cccaccaagcaagtaactccagcactaattaacttgcttaacatggagcacaattttgat
atgatgaatcatgcttgtagagccttaacctacatgatggaggctctgcccaggtcttca
gccgttgtggtggatgctgtacctgtgttcctagagaagctgcaggtcatccagtgtatg
gatgttgccgaacagtcgctcactgcccttgacatgctctcccgcaagcactccaaggca
atattgcaggctcatggggtgtctgcctgcctaacgtacatagacttcttttccactgga
gctcaacgtgcggctctgagtatcacggccaactgttgccagaacctcacagctgatgag
ttccacttcatcgcagagtctcttcaactcctgtctacaagactcacttcacagggagac
aagaaatgtgtggagagcgtgtgcttggcctatagtcgactggtagattgtttccaaaat
gacccgaaccgccttcaagaaatagctggccctggccttctttccaacattcaacaacta
ctagtcatgtccccacccgtgttaaacagtggaacattcatcatggtcatacgaatgttg
tcccttatgtgcaacaactgtcctgaactggctgtgcaacttctcaaaaacaatattgca
catacattgtgttacctcctcaccaactcaacagaacctcctggggaacaagtagaatta
gtatctcgtagccctcaagagttgtacgagatcacatgtttaattggagagttgatgcct
atgcttccttctgatggcatctttgcaattgatggggccttgcagcgaccttcaggttgt
gctcaggatacggttatgtggcaatggcaagatgagagaaatacctggcagaattactct
acaagtgactccagaataattgagcattctcaccagtcaggggaggatgaaataagccta
tgtattcaaggccgtgcctacaccatagattttcactcgatgcagcaaatcaacgacaac
tctggcaacatgcggcctgttcagaggcgcatggtgcctgtaggcttaggcggaactgtg
cttacggcaactcaggctacagatgctagagcaaagtgcctgcgtgaagactcggagttg
gcatccaatctcatccgctctttgtttagtttgttgtatgaagtgtacagctcttctgcg
ggaccagctgtgcgatacaaatgtttacgcgcactgttgaggatggtgcaattttccagt
cctgatcttctgcagcaagtgttgaagagtcagagtgtttcatctcacttggccactatg
ttatcatcccaggatttaaaaataattgttggagccattcaaatggcagagatcctcatg
ttaaagctgccagagatatttgcaatatactttcgccgtgaaggagttatgtatcaaata
aagcggttatgtaatccgaatgccaccctgggagcgccgactgctaaatggagcagcccc
gagctatccttaggctctggtcggggtgggactccaaactctgcaagcccactgctgaca
ggccgtccatttaatggtaactgcttggactcgactccatctctccctacacctcctagc
caggacgatgataaactacagagcccatcacaactgagactctatgatgtgctcaagcgc
aagcgtactgcccgcatgcgtagtgggaattcgagaaaaaataggcaagaagattcctca
ccatcatcatcattcagtgaattcttcatgaagaatgcaggcttggggggaggtcgagac
acctggaaagtggctagtcgtaacaacagcagtaattccacaactagtgggggtagcagt
aagtcgtccttcctggccaacttcaaccccacacgctggggaagatgcaaccctgccact
tccactccctctcatgaatcgcctgctggaaagggtttctttatattggaatatcaacag
gacaaattagttagtaacaatgttagcagtggaagcagcagcaataataaggaagtggtg
cgagtgtgggtgagggagcaggcagagcgactcaatcagcagttcttctcaaatgaatta
actgtacaaggagcttatcatcctgcccttagtgtattaaatagacttatgacagctctt
cggcaattggaaaaagagttacagcctaactgtgcagttgaggccttaagggaaatcagc
aggattgttagcgagagtgatatcagtccatttgaagtgatccactctgggttggttcgt
agtctattgacctacctcactgccacggagaattcaactctgactctgtccttcacccac
gatggagccatattgaccagcatgggtgggctgggtagtagctcagagaatggaagcctc
acggcacccgtcaacataagcacaccacgggaaaccagactcaggaatttccttcatgtc
ttccttggatgcacattgaatccactaagcctaggcactgtggacaccagtcacattgca
ttgttcagtgctctggtgacaaagctcaatggctgcgtcaatcaactggagcagtttcca
gttaaggtccacgacttaccgggtactgctctttcgggtttgggtagaggagggtcgaca
tcggccatcaaattcttcaacacacaccagcttaagtgcaacttacaacgtcacccagac
tgcacaagattaagacagtggcgtggaggaccagtcaaggttgatcccttggctctggtg
caagccattgagcgttacttggtcatcagaggttacggtcgactcagggatgaagatgac
gacaactccgatgatgacaactcggacgaagacatcgacgatactttggctgctgtgtca
gttaaccagagttcttcaagtcacaagctacagtttgtcatcaatgaacatgtcttgcca
tacaacatgactgtctaccaggcaattagacagttctcatcaccctccgatgccagtgcc
tcagaagcagacactgatacggagactccagtttctcactctgccatctggctacaaact
cacactatatactatagacccgttcaagaagaggaacaaagtcggagttcaggaggaaga
aaggggaaggctggaggatccaaaaccagcccaaagaagaaagctgacacccatgttgga
gatggaagcattgtgggaggaaataatagtgttctagaccagtacctgacttttaatctt
ccggctagtgtgactgtctttgatccaagtattgaagtgttggctctactgcgtgtcctt
catgccctgaacagacattacggctccctctaccccccagcctgctacccgtcccctcta
cccactgctgaattcacaaatctcaaattaacagctaaagcaaatagacagttgcaagat
cccttggttataatgacaggaaatgttccaccgtggttgcctcaaattgcttatgtttgt
ccgttcctgtttccattcgagacccgccagctgctcttctatgcagtttctttcgaccgt
gaccgagccttacaacgactcatggactcgtctcctgagcttaattctgttgacagtagt
gaaagagttaccccaagacttgaaaaacgcaagagaactgtgtctcgtgatgatattctc
aaacaggccgagtctgtgataagtgatttagcttcctcaagagccatgttagaaattcag
tacgataatgaggtggggacaggtttagggccaaccttagagttttatgctcttgtttct
aaagagctccagaaggcagacttagagttgtggcgtggtgaaactgttactgtggaagag
agaactgaagataatcctggaaaagcggtgaagtatgttaatgccagcaatggcttgtat
ccgttgcctgtacccagaaatatgaaatctgcacacatgactaaattaagaacaaaattt
agattccttggaaagttcatggcaaaagctgtcatggattcaagaatgctggatttgggc
cttcatgagtgtgtatacaaatggctgttgagtgaggaatggtccctgggtctaggtgat
gtaacttcacttgaccccacactgggacacacactagatcgccttcactccactgtgtta
caaaagaggcgggtcgtggtacaggctgagcaggaaggaatctcgggggcagagcttcag
ggtcgactggatgctctgacagtagacggctgcagtgtggaggatctagcactgaccttt
acattgcccggctatcctaacatagagtttagaaaggggggctcagatatatctgttact
atcaacaaccttgatcagtatctgcagctggtgatagaatggttagtgcgggaaggagtg
agaagacaaatggaagccctccgggaaggatttgaatgcgtgtttccgttgacacaactc
cacgtcttctacccggaggagttggaacaactgttctgtggctcctcagatgtatcacag
tgggacatgaagcagcttgccgagtgttgccgtcccgatcacggctatacgcacaattct
cgagcagtcaagttcctgttgcaaatattgtctgaatatacacctgctcatcagagatct
ttcttgcaatttgttacaggttcacccaggcttcctgttggaggttttagaagcctaacc
ccagcactcactattgtgagaaagacgtttgaggctggagagaatcctgacgacttctta
ccctctgtgatgacttgcgttaactacctgaaactaccagactactccagtattgatatt
atgcgtgccaaattggagatagcagccagagagggtcagcacagcttccacctctcatag
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integrated database retrieval system
