Homarus americanus (American lobster): 121860727
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Entry
121860727 CDS
T07477
Name
(RefSeq) tubulin alpha-1C chain-like isoform X1
KO
K07374
tubulin alpha
Organism
hame
Homarus americanus (American lobster)
Pathway
hame04145
Phagosome
hame04517
IgSF CAM signaling
hame04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121860727
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121860727
09142 Cell motility
04814 Motor proteins
121860727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hame03019
]
121860727
03036 Chromosome and associated proteins [BR:
hame03036
]
121860727
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hame04812
]
121860727
04147 Exosome [BR:
hame04147
]
121860727
Messenger RNA biogenesis [BR:
hame03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121860727
Chromosome and associated proteins [BR:
hame03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
121860727
Cytoskeleton proteins [BR:
hame04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
121860727
Exosome [BR:
hame04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121860727
Exosomal proteins of other body fluids (saliva and urine)
121860727
Exosomal proteins of colorectal cancer cells
121860727
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
121860727
NCBI-ProteinID:
XP_042213988
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MVSGGRECISMHVGQAGVQMGNACWELYCLEHGIQADGGMIMDETEPNQPYIADDSFNTF
FNETRMGKHVPRAVFIDLEPTVVDEIRTGTYRSLFAPDTLRTGKEDAANNYARGHYTVGR
EQMDVIRECVRKQTEQCSGLQGFLVFHSFGGGTGSGFGSLLMEHLSIDYGKKSKLCFSIY
PAPQVSTAVVEPYNSILFTHTTLEHADVTFMVDNEAIYDLCKKRLDISRPTYTNLNRMIG
QVVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVVSTENAFHEDFSVRDIT
ANCFDTTYQMVKCDPRNGKYMACCLLFRGDVVPKDVSAAIAETRTKKNITFVDWCPTGFK
VGINYQPPTVVPGTDLAKVERAVCALSNTTAIKDAWERLDRKFDLMFSKRAFVHWYVGEG
MEEGEFTEAREDTAALEMDYHEVESSAAEIDDDDEVLVDYLH
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggtcagcggaggtcgagaatgtatcagcatgcacgtgggtcaggctggggtgcagatg
ggcaacgcgtgctgggagctgtattgcctggaacacggcatccaagctgatggcggcatg
ataatggatgagacagagccaaatcaaccctacatagcggacgactcgtttaataccttc
ttcaacgagaccagaatgggaaagcacgtgcccagggcggtgttcattgacctcgagcct
acagtggtggatgagatcaggacgggtacctaccggtcactcttcgcccccgacaccctc
cgcactggcaaggaggatgctgccaacaactacgcccgtggccactacaccgttggtagg
gaacagatggatgttattcgggaatgtgttagaaaacaaacggagcagtgttcagggctt
cagggcttccttgtcttccactcctttggtggaggcaccggatcaggtttcggctctctt
ctgatggagcacctgtccattgactatggtaaaaagtccaagctctgcttctccatatat
cctgccccacaggtctcaacagctgtggttgaaccatacaactccatcctcttcacacac
acaacactggaacatgcggacgtgacatttatggtggataatgaagccatctatgacctc
tgtaagaagaggctcgacatctcccgacccacatacactaacctcaaccgtatgatcggg
caggtggtctccagcatcacagcctcactcaggttcgatggagcattgaatgttgacctg
acagagtttcagaccaatcttgtgccttaccccaggatacacttcccactggctacatat
gcaccagtagtgtcaactgaaaatgccttccatgaggattttagtgtgcgtgatataact
gctaactgctttgatacaacctaccagatggtcaagtgtgatcccaggaatggtaaatat
atggcatgttgtctcctcttccgtggggatgttgttcctaaggatgtcagcgctgccatt
gccgagacacgcaccaagaaaaatattacttttgtcgattggtgtccaacaggcttcaag
gtgggcatcaactaccagccaccaactgtggtacctggtactgacttggctaaagtagag
agagctgtttgtgctctctcaaacacaactgcaattaaggacgcctgggagcgcctcgac
cgcaagtttgatttgatgttctccaaaagagcctttgtacactggtacgttggagaaggc
atggaagaaggagagtttaccgaggccagagaggacactgctgccttagaaatggactac
catgaggtggagtcgagcgcagctgaaatagatgatgatgatgaggttctagtagactac
ctccactga
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