Homarus americanus (American lobster): 121860939
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Entry
121860939 CDS
T07477
Name
(RefSeq) uncharacterized protein LOC121860939 isoform X1
KO
K06100
symplekin
Organism
hame
Homarus americanus (American lobster)
Pathway
hame03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121860939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hame03021
]
121860939
03019 Messenger RNA biogenesis [BR:
hame03019
]
121860939
Transcription machinery [BR:
hame03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
121860939
Messenger RNA biogenesis [BR:
hame03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
121860939
U7-dependent histone pre-mRNA processing factors
121860939
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SYMPK_PTA1_N
HisKin-conflict
Motif
Other DBs
NCBI-GeneID:
121860939
NCBI-ProteinID:
XP_042214266
LinkDB
All DBs
Position
Unknown
AA seq
825 aa
AA seq
DB search
MKGCVMEYAAMLSAPDLVSGLRDLLADPDQAVVKRTIRVFANVYRHALQLLTSGDLDEVT
FNGAWPAVKSVAEHLIHMLTTAENEGLIIHIVRFLEAALVAHLLSDVNRFSGLAAQSPKM
VAKGIAALKGLVTTPYVGGSAFIVAVRALITVACYKPDLWGPVTNLIEKQIASPPPTLFD
HNVRSLHKILQRNLFRLLRRADSTALRRQLIDMMVTVGVPRRMLSQWAPPQESRKRPSQM
AQSEDSITGRNTPPTKRPKHEGEDVQESRTTPPRDPREARDPREPRVPRDPREAHGESWD
RRVSVEPRDPRTVQRADPRLSPPLDPRASVSQDPSSKPNTPPASGRSTPEERKVVKHKKV
KEVNSNFEFLKSLITSTKKKPELSTERFSEKERALYERLDHPHVVELVLSCLDSVPDSPP
EDLLTKLGHGSGDVDGIREHLTRLLAPHIHTDFINSLTPVEDDNTASNSNPPSRPSSTSS
ASTPFSHRITPPLSNQREPSPPSPPSSNRSTPTDLTQICNSDVDLRQLLNKGFKTTGDVD
MRTGDLLRPTRDPRGATADQKLATDLKTSQPDPRTVRTSRPEPLDNKGDTRTQVINTSTQ
LDPRIAMTDSRRTMSDHTDLCINNMDPRITHSFNDARDPRMGNCPDLREQILVNNQRSFM
GMGNGMPGPRNMMHNNFQNFGNGGGMNRQDPRMMNGPLGMGMSNGPMNPAGRMGNVNDQG
FMGGGNNMYGPGPGGMNGPGCMNGAGGMNGSGGMNGPGGMNGPGGMNGPGGMNGRGGMNG
PGCMNGPGGIGGPWQGNMQQNRMAMMMPMMNGGHGMFPQAPPMHL
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgaaggggtgcgtgatggaatatgcggccatgttaagtgcgccggacctagtgtcaggg
ttacgagacctactggctgaccctgaccaggcggtggtgaagcgcactatacgggtgttt
gctaacgtgtaccgccacgccctgcagctattaacctcaggcgacctggacgaggttacc
tttaatggtgcctggccagcggtcaagagtgtagcagaacacctcatacacatgctgacc
acagccgagaacgagggtttgatcatacacattgttcgcttcctggaggcggcgctggtt
gcccacctgttgagtgacgtgaaccgcttctcaggtcttgctgctcagagccccaagatg
gttgccaagggaatagcggcactcaaaggattggtaaccacgccctacgtcgggggctca
gccttcatcgtggcggtgcgagccctcatcaccgtcgcctgttacaagcctgacctatgg
ggacctgtcaccaatctcatagaaaaacagattgcgtcaccgcctcctacactgttcgac
cacaacgtgcggtcacttcacaagatactacaaaggaacctcttccgtttgttaagacga
gctgactccactgctctgcgtcgtcagctgattgacatgatggtgactgtgggcgtcccg
cgtcgcatgctttcccagtgggccccgccacaggaaagccgcaagagaccatctcagatg
gcacaaagtgaagactccatcaccggccgtaacactccgcccaccaaacgacccaaacac
gagggtgaagatgtccaggaaagccgaacaacaccaccaagagatcctcgcgaggcacgc
gaccccagagaaccacgtgtcccccgcgaccccagagaagcacatggtgagtcatgggac
cggagagtcagtgttgaacccagagacccgcgaacagttcagcgggcggacccacgactc
agtcctcctctcgacccacgagcgtctgtcagccaagacccgtccagcaagcctaataca
ccaccagcatcgggcaggtccacacctgaagaaagaaaagttgttaaacataagaaagtt
aaggaagttaattcaaactttgagtttttgaagagtttgataacaagcacaaagaagaag
ccagaattgtccacagagcgtttttcagagaaggagcgagcactatacgagcggctggat
caccctcatgtggtggagctggtgttgtcttgtctagacagcgtgccagactctcccccg
gaggatttactcacgaagcttggtcatggcagcggtgacgtagacggcatcagggaacac
ttaactcgcctactggcgccgcacatccacactgatttcatcaacagcctaactcccgta
gaagatgacaacaccgcttccaactccaaccctccatcaagaccgtcttccacttcctct
gcctcaactcccttctcacatcgcataactccacctctgtctaaccagcgggaaccttcg
ccgccgtctcctccctcatccaaccgctcaacgcccacagatcttacacaaatatgcaac
tctgatgttgatcttcgccagttgttgaataaaggatttaagactacaggcgacgtagac
atgagaactggtgaccttctgcgaccaacccgagaccccaggggtgctacagcagaccaa
aaacttgcaacagatctaaaaacttctcagccagacccaagaacagttagaacaagcaga
ccggaaccccttgataataaaggagacacgaggacacaagtaatcaacactagtacgcaa
ctagaccccaggatcgccatgactgactccaggaggacgatgtctgatcatacagacttg
tgtataaacaatatggaccctagaatcacccattccttcaatgatgccagagacccaaga
atgggcaactgtcctgaccttcgtgaacagatactggtcaacaaccaacgcagctttatg
ggaatgggtaatggtatgcccggcccgaggaacatgatgcacaacaacttccagaatttc
gggaacggcggcggcatgaaccgtcaggacccacggatgatgaatggcccacttgggatg
gggatgagtaacggccccatgaatcccgcgggaaggatggggaatgttaatgaccagggc
tttatggggggtggtaataatatgtacggtcctgggccaggtggtatgaatggaccaggt
tgtatgaatggagcaggtggtatgaatggatcaggtggtatgaatgggccaggtggtatg
aatggaccaggtggtatgaatgggccaggtggtatgaatggacggggtggtatgaatggg
ccaggatgtatgaatgggcccggtggtataggtggaccttggcaagggaacatgcaacaa
aatcgcatggctatgatgatgcccatgatgaacggtggtcacggtatgttccctcaggcg
ccgcccatgcacttgtag
DBGET
integrated database retrieval system
