Homarus americanus (American lobster): 121861027
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Entry
121861027 CDS
T07477
Name
(RefSeq) uncharacterized protein LOC121861027
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
hame
Homarus americanus (American lobster)
Pathway
hame03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
121861027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hame04121
]
121861027
03400 DNA repair and recombination proteins [BR:
hame03400
]
121861027
Ubiquitin system [BR:
hame04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
121861027
DNA repair and recombination proteins [BR:
hame03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
121861027
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slx4
BTB
Motif
Other DBs
NCBI-GeneID:
121861027
NCBI-ProteinID:
XP_042214441
LinkDB
All DBs
Position
Unknown
AA seq
1962 aa
AA seq
DB search
MSPKMSAGRSIRLSRKRKHEVDLPCVSGSSLHDITDDFQDTAIVFRLPKKLKAEKSTAPP
RPRGRPSKRGTGKNVQSEHILCKEKEGPDLHDNNDDFVDHPDLPCVKTETQTLDTQDAAA
EDNNFLLDLEKSICSESEKLCPCCKHIVPCSIFSDHFKQCLQKFKLTKRCSENNSLVVTA
SKAKEDDDQEETELEREKKDKPQVLPCPVCMKSQRSKVQRSSHMKNCAQTHGLTSEQLLM
ASRLLEKQVEERSQLGLPLFVQPNDTGQDRGTGKAKESTARSIRAAKADPDLMMALALSR
SAAEEQVAKRAAKEEKLLALGLDQIVDEDRKAQPIIFPSPVKESHRATAGHPRGKGRKRR
GNFQKTTLAMRSVEERERLISEKVASILSSEDTPIVNWENTSSSGAKGHLSQFKDKDCRL
WDAAHRCTDHPLEEFYVPELEPYIKPKKVEVGGLLRSLSQIPGRLNLTSRHAVSDENSDS
GSECEETSVVDGYCTQLALAELLGSQDCLEYTCNDICFDADQAMPQEIESATDPNETVEA
GSGFWLVHSSDEGKSKDYDETYKKIKSEGGGKTVESIVVERNNESCKESTSVNSDSKVEH
QNDSLGDDLIGSIVEDDCKMLDEDMKECDTEKDEINIQGNLSKESWIQIDRDNLISDSPQ
ERDITDTESVDNKYLKNNSKKDYKPGINLAQIEVLSNPHISECQDEDNSDCEVLAVLNKS
SECTLNTELENDPVCCTILPSACDSSEDKISSEKSSGLELVQNRDEEEGSISCVKDKASN
ASVNSDHSNDSFATQILQENKISCDVASVHSDDSISTQIFSEDGNQISCIATCTKSFLED
DTILHSGNKLPASSKDNVSRQTDRDKKEEKSVKSLSLNIAIGGKTSNPCIGFQSDCRNVD
LVTLQDSDCSEPPPLQLKQKGKSNLMTFPVGDSDAILQRAEESCGEIFSLQKTLPISDEG
LNNETVNHDMETIKLPPSRKITDEMKKGRLNYLRSQLVNQDKCVETKSMEDKFLLDWSAL
LASEDESDVTVTTSDSSSISIHSLVLIVRCPQLYKEVKENKMQVKWEGISFEGAHTFLAY
LYTGTCKIKVKDDPLWMDTFDLALQYKCKDLISYLESLYKASSSPIKAVSLENSPNTSRV
MNNNTSSNADICLASKRLRSLQEKRGESGRIVRRQLNLSPICKKTPEVVLKTPERRNSPA
NIDKENSSTGDNVERIRDTHINRGLQSPDLFEESVLSEDPSPSPPTLVYPNLSPCEESVA
AVPSEPRFSSALGPDKNSSGKLDSLGQHSRSSLNVPASDVKVSSEALPLLSPQRTKKMNN
EKLLENEQSFERRSAGNISDQTCSLSSIKDTRSSLLLKAADQNEFKDCPEVDEHCMDYPE
AENDYMACHKSNEENTDHPKPYGENIIDCPEVGDDIFSNCPEIGDSIFSNCPEVVEGNMI
DLTLSSSDSSPDLDLTDEEMEPWTNMKTPNTNKNISQQELDTVDAPDAPVQNLTEDENPD
MEQENVNEPYITNVWEDFDDVGCALPYPIDDCPTPAKYPEVTEANVHTDDNILPILRQIS
QKRKESPFSSTKRNVCGASSSQCEPDFAPLCELPVTEASTRKSSEKIDISSSRTKFRGSA
LKGGAKSLCEDANTIVSGSFIGNETLVQLTEDLEDSLIWKEFEKEDDEGFKQMSKKSCKS
VNFQEAIPNLTTPETNKTSKRKTVTPLPDYKNMSTPNLKEELSKYGVRPLGRRKAVVLLQ
HVYEETHPLVTDSEAESSFCETPHQRTPLRLTSKFVNMKNKTTVQEKITSKGIKTSAAVD
GQNINKKVIGKDVTIAPPITEQMDSDEDEEDWSSQINSSQVSSSSSAGSEFECLEESMLR
IGEDDIISPTRQVNLGSQVVQFITSDPELHQKVLLYEPFFVEELQSNLKANGVKCNMKNL
LGVLDDQCITFRTHQGQKNRARTRRSKKKSLIQSPKKYKEKL
NT seq
5889 nt
NT seq
+upstream
nt +downstream
nt
atgagccccaaaatgagtgctggtaggagtattcgcctttctcgcaagagaaaacatgaa
gtggatttgccgtgtgtgtcgggttcatctttacacgatatcactgatgactttcaagat
actgccattgtcttcaggcttccaaagaagctcaaagctgaaaagtctactgctcctcca
aggccacgtggtagaccttcgaagagaggcacggggaaaaatgtgcaaagtgaacatatt
ttgtgtaaagaaaaagaaggcccagatttacacgataacaacgatgattttgttgatcat
ccagacctgccatgtgtgaagacagagactcaaactcttgatacccaagatgctgctgct
gaagacaataattttcttttggacttagaaaaatctatatgttctgaatcagaaaaatta
tgtccttgttgcaaacatattgttccttgttctatattttctgatcattttaaacaatgt
ttgcagaaatttaaactaacaaagagatgctctgaaaataattcattggttgtaacagca
agtaaggccaaggaagatgatgaccaagaagagacagagttagaaagggaaaaaaaagac
aaaccacaagtacttccatgtcctgtttgtatgaagtctcaaaggtccaaagtccagcgt
agctcccacatgaagaactgtgcccaaactcacggattaacctcagaacaacttctgatg
gcctcaagattactagaaaagcaagttgaagaaagaagccagttaggacttcctcttttt
gtgcagccaaatgataccggacaagacagaggaacaggaaaggcaaaagaaagtacagca
agatccattagagcagccaaagcagacccagacttgatgatggccttggctctttcacgc
tctgctgctgaagagcaagttgcgaaaagagctgccaaggaagagaagttacttgccctt
gggttagaccagattgtggatgaggacagaaaggctcagcccatcatatttccctcccca
gtaaaagagagtcaccgagctacggcaggtcacccaaggggtaagggacgaaaacggcgt
ggcaattttcagaagacaacattagctatgcgttctgttgaagaaagggagagacttatt
agtgaaaaagttgcatcaatattatcctctgaggatactccaattgttaactgggaaaac
acttcaagttcaggagccaaaggtcatctctcacagtttaaggataaggattgcagatta
tgggatgctgctcatagatgcactgatcaccctcttgaggagttctatgttcctgagctt
gaaccatacattaaaccaaagaaagttgaagtgggaggacttttaagaagcctttcacaa
attcctggacgtttgaatctgacttctcgacatgcagtgagtgatgagaattctgactca
ggatctgaatgtgaagaaacatctgtggttgacggctactgcacgcagctagcccttgct
gagctcttaggttctcaagattgtcttgaatatacctgcaatgatatctgttttgatgca
gatcaagccatgcctcaagaaattgaatctgccacagatcccaatgaaactgtggaggct
gggagtggtttttggcttgttcactcaagtgatgaaggaaaaagtaaagattatgatgag
acttacaaaaaaattaagagtgaaggtggtggaaaaacagtggagagcatagtagtagag
agaaataatgagtcatgcaaggaaagtacaagtgttaatagtgacagtaaagttgagcat
caaaatgatagtctgggtgatgacttaataggttccattgtggaggatgactgtaaaatg
ttagatgaagatatgaaggagtgtgacactgaaaaagatgaaataaatatccagggaaat
ctgtcaaaagaatcctggatacaaatcgatagggataatttaatcagtgatagccctcaa
gaaagagatattactgatactgaatctgtagacaacaaatacctgaaaaataatagtaaa
aaagattataaaccaggtataaacttggcacaaattgaagttttaagtaatcctcacatc
agtgaatgtcaagatgaagataattcagattgtgaagtgttagcagtcttgaataagagt
tcagaatgcacattaaatactgaattagaaaatgaccctgtttgctgcacaatcttacct
tctgcctgtgatagctcagaggataagatatcctctgaaaaatcctcaggtttagagcta
gtgcaaaacagggatgaagaagaagggtcaattagctgtgttaaagataaagcgagcaat
gcatctgtaaattcagatcattcaaatgactcttttgcaacccaaatcttacaagaaaat
aaaatttcatgtgatgttgcatctgtacattcagatgattctatttcaacccaaatcttc
tcagaggatggtaatcagatttcatgcattgctacctgtacaaaaagttttcttgaagat
gacaccatcctccattcaggtaataagcttccagcctcaagtaaagataatgtctcaaga
caaactgatagagacaagaaagaggaaaaatctgtaaaaagtctttccttgaatattgca
attggagggaaaacaagcaatccctgcattggttttcaaagtgactgcagaaatgtggat
ttagtgactttgcaggacagtgattgcagtgaaccaccaccattacaattaaaacaaaaa
ggcaaaagtaacttgatgacatttcctgtaggtgatagtgatgctattttacaaagggca
gaagaaagttgtggagaaatattctcattgcagaaaacattaccaatttctgatgaaggg
ttaaataatgagacagtaaatcatgatatggagacaattaagttgcctccttcaagaaaa
attacagatgagatgaaaaaaggtcgcttaaattacttgagatcacagctagtaaaccaa
gataaatgtgtggaaacaaagtccatggaagacaaatttcttcttgattggagtgcacta
ctagcaagtgaagatgagagtgatgtcactgtaacaacatcagatagcagcagcatttca
atccactctctagtcttaattgtaagatgtcctcagctctataaagaagtgaaggagaac
aagatgcaagttaaatgggaaggaatttcatttgaaggagcacacacatttctagcatat
ctgtacactggtacttgtaaaataaaggtgaaggatgatccactgtggatggataccttt
gatttagctcttcagtataaatgtaaagatcttatatcatatctagaatctctttacaaa
gccagttcttctccgatcaaagcagtctctcttgaaaatagtcccaacacttctagggtc
atgaataataacacaagttcaaatgcagacatttgtttagcttcaaaaagattaagaagc
ttacaagaaaaaagaggagaaagtgggagaatagtgaggcgtcaacttaatttgtcccca
atttgtaaaaaaactccagaagttgtacttaaaactccagaaaggaggaactcgccagca
aacattgataaagaaaattcatcgactggtgataatgtggaaagaattagggacacgcat
atcaaccgaggacttcagtctcctgatttatttgaggagtctgttcttagtgaagatcct
tcaccttctccaccaacactagtctatcctaatctatctccatgtgaggaaagtgtagct
gctgtgccttcagaaccaagattttcctctgctttgggtccagataaaaattcatctggt
aaattagactccttaggtcagcactcgagatcttcattgaatgtccctgcaagtgatgtg
aaagtttcttcagaagccttgcctcttctcagtccccaaaggacaaagaaaatgaataat
gaaaagctccttgaaaatgagcaaagttttgagcgtaggagtgcaggcaatatatctgac
caaacttgtagtttgtcgagtataaaagacacaagatcctcactattattaaaagcagct
gatcaaaatgaatttaaggactgtcctgaagtagatgaacattgtatggactatccagaa
gcagagaatgactatatggcctgtcataagtcaaatgaagagaacacggaccacccaaag
ccatatggagagaacataattgactgtcctgaagtaggtgatgatatcttcagtaactgt
cctgaaataggtgatagtatcttcagtaactgtccagaagtagttgaaggtaacatgatt
gatctaactctcagtagttctgatagttctcctgacttggatcttactgatgaagaaatg
gaaccatggacaaatatgaaaactcctaatactaataaaaacatttctcaacaagaacta
gacactgtagatgctcctgatgcaccagtccaaaatttgacagaagatgaaaacccagac
atggaacaagagaatgtaaatgaaccgtacatcaccaacgtatgggaggattttgatgat
gtaggttgtgctttgccatatcccatagatgattgtccaacacctgcaaaatatccagaa
gtgactgaagctaatgttcatactgatgataatattttacccattttaagacaaatttct
cagaaaaggaaagaaagccctttctctagcactaagaggaatgtttgtggtgcaagttct
tctcagtgtgagccagattttgctccactgtgtgaattgcctgtgacagaagcctcaaca
aggaagtcttcagagaaaattgacattagctcatcgagaacaaaattcagaggatcggca
ttaaaaggaggagctaaatcattatgtgaagatgcaaatacaatagtgtcaggatctttt
attggcaatgaaaccttggttcagctaacagaggaccttgaagatagcttaatttggaaa
gagtttgaaaaggaagatgatgaaggtttcaaacaaatgtctaaaaaaagttgcaaatct
gtgaattttcaagaagcaattcctaatctgacgacacctgaaacaaacaaaacatcaaag
aggaaaactgtgacaccattgcctgattataagaatatgtccactcccaatcttaaggaa
gaattatcaaaatatggtgtgcgaccactgggtcgtcggaaggctgtggtactcctgcag
catgtgtatgaagagactcatccccttgttactgatagtgaggctgagagtagcttttgt
gaaactcctcaccagagaacacccttaaggcttacatctaagtttgtaaacatgaaaaac
aaaaccacagtgcaggagaaaattacatcaaagggcattaaaacctcggctgcagtagat
ggtcaaaacattaacaagaaggtgattggtaaggatgtgacaattgctcctcccataact
gaacaaatggatagtgatgaggatgaagaggactggagtagccagattaattcttctcaa
gtgtcttcctcaagcagtgctggttctgaatttgaatgccttgaggagtcgatgttaaga
attggtgaggacgacattatttccccaactcggcaagttaatcttggtagtcaggtagtg
caattcattaccagtgatccagagctgcaccaaaaggttctgttgtatgaacccttcttt
gttgaggaactgcagtctaacctcaaggccaacggtgttaagtgcaatatgaaaaacctg
cttggtgttttagatgatcagtgcataactttccgtacacaccaaggccaaaagaataga
gcaaggacaagaagatctaagaaaaaatctttaatccaatctcccaagaaatataaggaa
aaattgtag
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integrated database retrieval system
