Homarus americanus (American lobster): 121861200
Help
Entry
121861200 CDS
T07477
Name
(RefSeq) DNA mismatch repair protein Msh2-like isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
hame
Homarus americanus (American lobster)
Pathway
hame03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
121861200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hame03400
]
121861200
DNA repair and recombination proteins [BR:
hame03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
121861200
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Fcf2
Motif
Other DBs
NCBI-GeneID:
121861200
NCBI-ProteinID:
XP_042214736
LinkDB
All DBs
Position
Unknown
AA seq
927 aa
AA seq
DB search
MATVQPKEQLTLDSANEQGFLSFYQSLPEKITTTVRVFDRGDFYTVHGQDALLAARELFR
TNSVVKLLGSGDKKLESVVLRRLNFESFVRDLLLVKHYRVEVYKQKSTCKNDWEVEYKAS
PGNLSQFEEVLFGVNNEQTVTTGVIAVKLATENGQRVVGVGFVDVTSRLMTVSEFSDNDT
FSNLEALVVQLGPRECLVPMGDLGPDGVKLKQVLSRNPLLVSERKRREFNNKDAAQDLGR
LLRTKGRDAAAVSARPELDRTNAVASLAAVIKYLELLGDESNFGQFSLSTYDLSQYMRLD
SAAVRALHVEPIGGAETSGAANKTHTLLGLLDKCQTPVGHRLLLQWLRQPLVDINKIEER
QDMVEALVSSVELRHSLGEEHLRRVPDLNRLSRKLARKAATLQDCFKFYQCVERLPNLCE
AIAKYDGPHVASLAAVFTTPVQEVLSDLGKYQEMIETTVDMEQANQGEYVIKPDFDESLA
ELRETMNGLEADIQSQLRKAANDLGLDAGKSIKLESTAQLGYFFRVTLKEEQVLRNNRNY
RMIDTNKAGVRFRNNTLQDLNDQYISAREDYNEQQKTVVEEIMNIAAGYVEVIQHLGQIL
GTLDCIFALASAAVSAPIPYVKPKLRERGTGVLKLDSVRHPCLELQDDVSFIPNDCHFDK
DNGMFHIITGPNMGGKSTYLRSVGTAVLMAQVGSFVACEEAEISVVDSILARVGAGDCQL
KGVSTFMAEMLETASILRSASNESLVIIDELGRGTSTYDGFGLAWAISEHIAKEIGSFCL
FATHFHELTALADELNTVKNYHVTATTAHGALTLLYQVCPGPCDRSFGIHVAELANFPAS
VIEYAKRKAGELEDEFGDDDDSEEAVKRRKLEKQEGEKIIEEFLAKAAALDTDILSDEEL
QAEVKKLKQEVQGRNNSYVSHLLSRET
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggccactgtacagcccaaggaacagctcactttagatagtgccaatgagcaagggttc
ctgtccttctaccagagtctacctgagaaaattaccacgactgtgcgggtgtttgaccga
ggagacttctacactgttcatggccaggacgcgctgctggccgctcgagaacttttccgt
actaattcagtggtcaaattacttggatcaggtgataagaagttggagtcggtggtgcta
aggcggctgaactttgagtctttcgttagggacctcctgctggtgaagcactaccgggta
gaagtatacaaacagaagtctacctgtaaaaatgactgggaggtggaatataaggcttct
cctggcaatctgagtcagtttgaggaggtcctttttggtgttaacaatgaacaaacagtt
accacaggtgttatagctgtaaaactagctacagaaaatggacagagggttgtgggagtt
ggttttgtggatgttaccagccggctgatgactgtgtctgagttcagtgacaatgacacc
ttcagtaacctggaggctctggtggtacagctggggccccgggagtgtcttgtccctatg
ggtgatttgggtcctgatggtgtcaagcttaaacaggtgttgtctcggaacccattactt
gttagtgagaggaagaggagagagttcaacaataaggatgcagcccaagacctaggtcgt
ctgttgcgtaccaagggtagagatgcagcggctgtttcagctcgcccagagcttgatcgt
acaaatgctgttgcttcactggcagcagttattaaatatctggaactcctcggtgatgag
tcaaactttgggcagttctcattatccacatatgatctgagccaatacatgagactagat
agtgcagcagttcgggcactgcacgtggagcccattggaggtgcggaaacatctggggct
gccaacaagacgcacactcttcttggtctcttagataaatgccagactcctgtaggacat
cgtttacttctacagtggctcagacaacccttggtggatatcaacaagattgaagagcga
caagatatggttgaggctctggtgtcatctgtggagctgcggcacagtcttggggaggaa
caccttcgtcgtgtacctgacctgaaccgcctctctaggaaactggcacgcaaggcagcc
acactccaagactgtttcaaattttaccaatgtgttgaacgcttaccgaatttatgtgaa
gcaatagccaaatacgatggtcctcatgttgcttcattagcggcagtgttcacaacccct
gtccaggaggtgctgtcagatctaggaaaatatcaagaaatgattgagacaacagtagat
atggagcaggcaaatcaaggggagtacgtcatcaagccagattttgatgaatccttggca
gaactacgagaaacaatgaatggtctggaagcagacatccagagtcaactgaggaaggct
gcgaatgaccttggtcttgatgctggcaagagtataaaactggagtcaactgctcagttg
ggttacttcttcagggtcacactcaaggaagaacaagtgttacgtaacaacaggaattac
cggatgattgacaccaacaaggccggggtgaggttcagaaataatacccttcaagacctt
aatgatcagtacatctcagcaagggaggattataatgaacagcaaaaaactgttgttgaa
gaaatcatgaatattgcagctggttatgttgaggtgattcagcacttaggtcagatattg
ggaactttggactgtatttttgccctggcatctgctgctgtttctgcccccataccttat
gtaaagcccaagctccgggagaggggtactggtgtgctcaagctggacagtgtccgtcac
ccatgtttggaactacaggatgatgtctcttttataccaaatgactgccattttgataaa
gataatggtatgttccacatcatcactggccccaacatgggaggtaagagcacttaccta
agatcagttggcacagctgtgttaatggctcaggtgggctcttttgtggcctgtgaggag
gctgaaatatctgtggtggacagcatccttgctcgagtgggtgcgggagactgccagctg
aagggagtttcaacatttatggcagagatgttggagacggcgtccatccttagatctgca
agcaatgagtctcttgtcattattgatgaacttggtcgtggaacatcaacttatgatggt
tttggattggcttgggccatatcagagcacatagctaaagagattggatcattctgcttg
tttgctacacatttccatgagctgacagctcttgcagatgagttgaatacagtcaagaat
taccatgtgacagctaccacagcacatggtgcacttaccctcctttatcaggtgtgtcca
ggaccttgtgaccgcagttttggtatccacgtggcagagttggccaacttcccagctagt
gtgatagagtatgccaagaggaaggctggggaactggaagatgaatttggtgatgacgat
gactcagaggaggccgtcaagaggagaaagctggagaaacaggaaggcgagaagatcatt
gaagaattcctggccaaggctgccgctcttgatacagacattctcagtgatgaggagcta
caagcagaggtgaagaagctaaaacaagaagttcaaggtcgaaataattcctatgtatcg
catctcttatccagggagacataa
DBGET
integrated database retrieval system
