Homarus americanus (American lobster): 121861336
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Entry
121861336 CDS
T07477
Name
(RefSeq) glutamate-gated chloride channel alpha-like
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
hame
Homarus americanus (American lobster)
Pathway
hame04080
Neuroactive ligand-receptor interaction
hame04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121861336
04082 Neuroactive ligand signaling
121861336
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hame04040
]
121861336
Ion channels [BR:
hame04040
]
Ligand-gated channels
GABA-A
121861336
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
121861336
NCBI-ProteinID:
XP_042214918
LinkDB
All DBs
Position
Unknown
AA seq
588 aa
AA seq
DB search
MEMSLLTGVVVSLLVHTCRGSSEGETLLLGTPKRIRRQATPVDPQVNSSDPQMPQMNGKP
DEGTGGCPGSEEFTPGRPRNPTLSSIIPAGYDQYVLPLTKDGGPLPVFISAKVRDIQKID
ELNMDLTIEWYIRLYWTDSGLNAPTHLPDNAWLNVAPDIIRYIWLPTTYIDHVKEVTKPT
LLLKAESFRMQNNGLIRYSISVTTRISCPMDFSAYPFDSQVCYFKMESYQFTSLQVSYKW
YSAEIERAENIASGHYDIDFYSVQQKNVSHSTGHFPTVMVEVVLKRRISYHLMNTFLPSG
LFVCVSWLTFLVPVDQIPGRMVLTITTLLTLVSMFAAVRQESPKVSYAKAVDQWMIMCVV
FVFCVLVEFTVVLRLYELGRRRASRKKASTAPLNSTAIATHRPTNVLPASVTATTYTNHS
VSSPVFMERARNLTSSSEGSSSPGVNKLKKRVWRASLALSRGGGEVGEGRGTWQEEKLRG
EIAEYREERDDGGDDDGNDDDDDPGSGGAGVDEVGGPCGTVESTGLPLHLLHGDNSSTTS
LGVIIKCYIIIDTLESMSPARHTVTSTSRRIVTSTHPGVRLGALWVDH
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggagatgtctctactgactggagtggttgtgtctctgttagtacacacctgtagaggc
agcagtgagggagaaaccttgttattggggacaccaaagaggataagacgacaagcgact
ccagttgacccccaagtgaactcttctgaccctcaaatgccccagatgaacggtaaacct
gacgaaggcaccggaggatgtccaggatcggaagaatttacccctgggcggcctaggaat
cccaccctgagttccatcatcccagccggctacgaccagtatgtcctgccgcttactaag
gacggtggaccgctgccggtgttcataagtgctaaggtccgggatattcagaagatagac
gaactaaacatggacctgactatagaatggtacatccggctctattggacagattccggc
ctcaacgcccccacgcacctccctgacaacgcctggctcaacgtagcacctgacattatc
cgctacatctggctcccaaccacgtatatagatcacgtgaaggaggtgacgaagccgacc
ctcctactcaaggccgagtccttcaggatgcagaacaacggactcatacgatactccatc
tcggtcaccacacgaatctcttgccccatggacttctccgcttaccccttcgacagtcag
gtgtgctacttcaagatggagagctatcagttcacatcactgcaggtttcctataagtgg
tacagcgcggagatagagagggcggagaacatcgcctcaggtcactatgatattgacttc
tacagcgtacaacagaagaacgtatctcactctacaggtcatttcccgacggtgatggtg
gaggtggtgctgaagcgacgtattagctaccatctgatgaacaccttcctgccgtcgggt
ctgttcgtgtgtgtgtcgtggctcacgttcctcgtacctgtcgaccagatccccggccgt
atggtactgacaatcactaccttgcttactctcgtctccatgttcgctgccgtcaggcag
gagagcccgaaggtgtcgtacgcgaaggcagtagaccagtggatgatcatgtgtgtggtg
ttcgtcttctgcgtcttggtggagttcaccgtcgtcctccgcctctacgagttggggagg
cggagagcatctcgtaagaaggcgtccactgcacctctcaactccactgccatcgccact
catcgtcccacaaacgtcctccccgccagcgtcaccgccaccacctacaccaaccacagt
gtgtccagtcctgtgttcatggagcgagcgaggaacctgacgtcttcttcggagggttcc
tcgagtcccggggtcaacaagctgaagaaacgggtatggagagcaagcttggcactgtca
cgagggggaggggaggtgggcgaggggcggggcacctggcaggaggagaaattaagaggg
gagatagctgagtatcgagaagagcgagacgacggcggcgacgacgacggcaacgacgac
gacgacgacccaggcagcggcggagcaggagtggacgaagtgggcggtccgtgtggaaca
gtggagtctacgggtcttccccttcatcttcttcatggagacaactcctcgaccacctct
ctcggcgtgatcatcaagtgttacatcataatagacacactcgagtctatgtcaccagca
cgtcacactgtcaccagcacgtcacgtcgtattgtcaccagcacacatccaggggttcga
ctaggggcactctgggttgaccattga
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