KEGG   Homarus americanus (American lobster): 121861659
Entry
121861659         CDS       T07477                                 
Name
(RefSeq) exosome component 10-like
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
hame  Homarus americanus (American lobster)
Pathway
hame03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hame00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    121861659
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hame03019]
    121861659
Messenger RNA biogenesis [BR:hame03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     121861659
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC PMC2NT
Other DBs
NCBI-GeneID: 121861659
NCBI-ProteinID: XP_042215487
LinkDB
Position
Unknown
AA seq 864 aa
MDSNIPNGSPPFIGNRTLTEYVKRVMTSVQGCQKVSAELQGWHHYRDYAGVHRTMEQVNA
SITSLISNIFSHQDIKLGLSHHKLLDQFDMIREGNDALLERINSDIDEASGLKKNADAEV
QDPVVKKVQGPSMNSAVGKNVVLLASRNVQKPQLFFTEKIDNSFKEPFIPMITEKPNSIK
PLSILICLDNSGREYYSHPYEYELHHWNPDPSQLTPVVPTPPKPIGDTSLVMVDTEHDLQ
NLVAELGKYKEIAVDVEHHGFRSYLGLTCLIQISTRDKDYIVDPLLLRGKLTILNEVFTN
PKITKVVHGADYDILWLQRDCGIYVVNLFDTHQAAVVLEYPHRSLAALLSRFCQIQANKV
YQRADWRIRPLPNDFIEYARQDSHYLLYIYDIMRNELIERGNQLNNLISAVYSRSAEICM
KRYEKPIVGPDSHMDLYRRSRKTFNSRQMFALRELYLWRDRVAREQDESPEFVLPKHMLL
QITEVLPKEMQGVLACCNPIPPLVKTELLTLHTIIREAREQPLIDIKLNPLQEHLPVGVM
PSSEDLHMNFICKHDLSHCEENPTDLPTLLNPRETLLGDLFLQNIVDISLKDQSQLFGHI
KIEKWHKGQEYSEMTDKFMSPYERYTSYVEMKPLLDGEKKKKEGELTDLDRVNRVRQHFL
SLSDNTEVTTKENIRVATNHTVDGETQVVAEGSLLQFSEDSSQQHQQLDETDKAESEQQS
ETVNKTKKHSGPSKSVILSEEIRESKTKNKSIKRKSSEKYEKSTKKVKKTDEGEEVVECS
GLEEGEVDESTGPDENNGNEQNPEEAFDYEIADYTIFQKPHNKGYSKRRQIKERFKGKSH
KGRGGKSSMKSFTWGGSDSHRGSR
NT seq 2595 nt   +upstreamnt  +downstreamnt
atggactctaatataccaaatggtagtcctccatttataggaaataggactttaactgaa
tatgtgaagagagttatgactagtgttcaaggatgtcagaaagtgagtgcagaacttcag
ggttggcaccattaccgggactatgcaggggttcatcgtacaatggagcaggttaatgct
agcattacatcattaattagcaacatcttcagtcatcaggacatcaagttggggctgtct
catcacaaactacttgaccagtttgacatgatcagggaaggcaatgatgccttgctggag
agaattaattctgacatagatgaagcttctggactgaagaagaatgctgatgctgaagta
caggatcctgttgtgaaaaaagttcagggaccatctatgaacagtgctgttggaaagaat
gtggttctgctggcatctcgtaatgtacaaaagccccagctgttttttacagaaaagatt
gataattcatttaaagaaccattcatacccatgatcactgagaaacccaattccatcaag
cctctgtcaatcctaatctgccttgataacagtggccgagagtattactctcatccctat
gagtatgagcttcatcattggaatccagatccttcacaactgaccccagttgtccccact
ccccccaagcccataggtgacacatctctggttatggtagacacagaacatgacttacaa
aatctggttgcagagcttggtaaatacaaagaaattgctgttgatgtagagcaccatgga
tttcggtcatatctaggacttacctgcctgatccagatatccactagggataaggattat
attgtggacccactgttactcagaggaaaacttacaatattaaatgaagtcttcacaaac
cccaaaattacaaaggtggttcatggtgctgattatgacatcttgtggctacaaagagac
tgtgggatatatgtagttaacctctttgacactcaccaagcagcagttgtacttgaatat
cctcaccgttcattagctgcccttctatcacgcttctgtcagatccaggccaataaagtt
tatcagagggcagactggagaataagacctctcccaaatgactttattgaatatgcaaga
caagattcacattacttgttatacatatatgacatcatgcgtaatgagcttattgaacga
ggcaaccaactcaacaatttgatttctgctgtttacagtcgttctgcagagatctgcatg
aagcgttatgagaaaccaattgtgggaccggatagtcacatggatttgtatcgccgcagt
cgtaaaacttttaactcaaggcagatgtttgctttgcgtgaactttatctgtggcgtgac
agagttgctcgtgaacaggatgaaagtcccgagttcgtgttgccaaagcatatgctgctg
caaataacagaggtattacctaaggagatgcaaggtgtgttggcttgttgcaaccccatc
cctccattggtcaagactgagctcctcactctacacacaattattagggaagctcgggag
caacctctcattgatattaaactcaatcctttacaagaacatcttcctgttggagtaatg
ccatcatcagaggatctacatatgaactttatctgcaaacatgatctttctcattgtgaa
gaaaatccaacagacctccctactctcctcaatcctagagaaactttgcttggagatctt
tttttacaaaacattgttgatatctctctcaaggatcagtcacagttgtttggacacata
aagattgaaaaatggcacaagggacaagaatattcagaaatgacagacaaattcatgagt
ccatatgaaaggtacacatcctatgtagagatgaagccactcctagatggagagaagaaa
aagaaggagggagagctcacagatcttgatcgggttaatagggttagacaacacttcttg
tcactctcagataacactgaagttactactaaagaaaacattagagtggcaaccaatcac
acggttgatggtgaaacacaagttgttgcagaaggttccttgctgcaatttagtgaagac
agttcacagcagcatcaacagttggatgaaacagataaagcagagagtgaacagcaatca
gaaacagtaaacaaaacaaagaaacattctggtccttccaaatcagttattttaagtgaa
gagatacgtgaaagtaaaaccaagaacaaatcaataaaaaggaaatcaagtgaaaaatat
gaaaaatcaacaaagaaagtgaaaaaaactgatgaaggtgaagaagtagtggaatgctct
ggactagaggagggagaggtagatgaaagtacaggtcctgatgaaaataatggcaatgaa
cagaatcctgaggaagcttttgattatgagattgctgattatactattttccaaaaacct
cataacaaaggttatagcaaaagacgacagatcaaggagagattcaaaggaaagagtcat
aaaggacggggtggaaaatccagtatgaagagtttcacttggggtggcagtgatagtcac
agagggagccggtag

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