Homarus americanus (American lobster): 121861772
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Entry
121861772 CDS
T07477
Name
(RefSeq) ATP-dependent RNA helicase Ddx1-like
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
hame
Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hame03041
]
121861772
03016 Transfer RNA biogenesis [BR:
hame03016
]
121861772
Enzymes [BR:
hame01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121861772
Spliceosome [BR:
hame03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
121861772
Transfer RNA biogenesis [BR:
hame03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
121861772
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
Fimbrial_PilY2
Motif
Other DBs
NCBI-GeneID:
121861772
NCBI-ProteinID:
XP_042215593
LinkDB
All DBs
Position
Unknown
AA seq
735 aa
AA seq
DB search
MAAFEEMGVLQEIAAAVEEMDWTLPTDVQNEAIPLILGGGDVLMAAETGSGKTGAFCLPI
LQIVWETLKDIQQGKTSKVNKEVSPHWLMSFFDRDAGMAVTPDGLRCQSRDPKSWQGVRC
TKAVTGKGKYYYEALVSDEGLCRVGWATPTASLDLGTCKSGFGYGGTGKKSNCKQFDEYG
ESFGLKDVIGCYLNLDNMEIHFSKNGVDLGKAFTLRSEFKNSVFHPSLVLKNAEMSFNFG
ATSFKHPPKAGYIALCEASKDCVVSSGVKGSGEKPKIQNNAPQAVIIEPSRELAEQTLKQ
ITLFRKHVENPVVRDLLVVGGIPVKDQIASLSAGVDIVCGTPGRLEDLINTGQLSLQACK
FFVLDEADGLLKQGHERLINNIYSAIPKITSDGKRLQMVVCSATLHSFEVKRMAERLMHF
PTWVDLKGEDAVPETVHHVVVTIDPRVDTSWTTLRRHVQTDGVHMKDGVRPGNNTPETLS
EALKLLKGEFCIKAIDTHNMDQALIFCRTKLDCDNLERYFNQIGGGANNRGNPYSCVCLH
GDRKPNERKANLQKFKEVGVKFLICTDVAARGIDVGGLPFIINVTLPDEKSNYVHRIGRV
GRAEKMGLAISLAAAVPEKVWYHGEWCSTRGRNCYNTRLTTEGGCCVWYNEPQYLADIEE
HLGVTIQQVDKEMKVPVDEFDGKVTYGEKRAHAGSGYQTHVEQLAPAVRELAHLESQTQI
VYLKRQYGKEYPWTR
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatttgaagagatgggtgtcttgcaagaaattgccgctgcagtggaggagatg
gactggacattaccaacggatgtccagaatgaagcaattccacttattttgggtggtgga
gatgttctaatggcagctgagaccggtagtggcaagactggtgccttctgtctgcccatc
ctgcaaattgtctgggaaacactaaaggatattcaacaaggcaagacttctaaggtcaat
aaagaagtctctcctcattggctgatgagtttctttgaccgtgatgcgggcatggccgtg
actcccgatggcctgcggtgtcagtctcgagaccctaaatcctggcagggtgtacgctgc
actaaggctgtcactggaaaggggaaatattattatgaagcacttgtgtcagatgagggg
ttgtgccgtgttggatgggcgactcctacggcttcactggatcttggaacttgcaagtca
ggatttggttatggaggaactggaaagaaatctaactgtaagcagtttgatgaatatggc
gagtcatttggactaaaagatgttattggttgctatctaaacctggataatatggaaatt
cattttagtaaaaatggcgttgacttgggtaaagccttcacactccgaagtgaattcaag
aattctgtcttccatccatcacttgtgttaaaaaatgcagagatgtctttcaactttggt
gcaaccagtttcaaacatccaccaaaagcaggatacattgcattatgtgaggccagcaaa
gactgtgttgtgagctcgggtgtgaagggaagtggagagaaacctaagattcagaacaat
gctccccaagctgtgataattgagccctcaagagaactcgcagaacaaaccctaaagcaa
ataacgttgttccgcaagcacgtggaaaacccagtggttcgtgaccttcttgttgttggt
ggtataccagtgaaggatcagatagcatcactcagtgcaggtgtggatattgtgtgtggc
actccaggacgcctagaagatctcattaacactggtcaattgtccctccaggcctgcaag
ttctttgtgctggatgaggctgatggccttctcaagcagggtcatgagcgtctcattaac
aacatctacagtgccatccccaagattacatcagatggcaagagactccagatggtcgtt
tgttctgccactttacattcctttgaagtaaaacgtatggctgagcgcctgatgcacttt
cctacatgggtagatctgaaaggtgaagatgctgtgcctgagactgtccatcatgttgtg
gtaaccattgatccacgagttgatactagctggaccaccctgcgccgccatgtacagact
gatggagtacatatgaaggatggtgtacgaccaggaaacaatacacctgagacactaagt
gaggcactgaagctgctaaaaggagaattctgtatcaaggccattgacacacacaacatg
gaccaagcactcatattttgccgcacaaaattggactgtgacaacttagagcgatatttc
aatcagattggtggtggagccaacaatagaggtaacccatattcatgtgtgtgcctccat
ggggaccgcaagccaaatgaacgcaaggcaaatcttcaaaaattcaaggaagtcggagtg
aagttcctgatatgcactgacgtggctgctcgtggaattgatgttggaggtctgcctttc
atcatcaacgtgactctgccagatgagaaaagcaactatgttcatcgtattggtcgtgta
ggtcgagcagagaaaatgggtctggctatctcccttgctgctgctgtgcctgagaaggtg
tggtaccatggagaatggtgttcaactagaggccgcaactgttataacacacgacttact
acagaaggtggttgttgtgtgtggtacaatgaaccacagtacttggctgacattgaagag
cacttgggtgttaccatccagcaagtggataaagaaatgaaggttccagttgatgaattt
gatggaaaagtgacttatggtgaaaagagagcccatgcaggctcaggctatcagacacat
gtggaacaacttgccccagcagtacgggagttggcacatctggagagtcagacacagatc
gtataccttaaacgacagtatggcaaggaatacccttggacacgatag
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