Homarus americanus (American lobster): 121862097
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Entry
121862097 CDS
T07477
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
hame
Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hame03009
]
121862097
Ribosome biogenesis [BR:
hame03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
121862097
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Motif
Other DBs
NCBI-GeneID:
121862097
NCBI-ProteinID:
XP_042216009
LinkDB
All DBs
Position
Unknown
AA seq
2803 aa
AA seq
DB search
MKEKPQRQAHKTTNTFTFRGFGEKVRALRVSARKFLLQRPQTEDGENVSIFYQTLIKCRE
LNLTEAFQAFQNDLGGDIQTTVQLIHQEEHVAQCLAEHLAIPRSMALQSLLNLLVAFAND
IPQEFYQRHFYNFLPKLVAHLSTKDPEQIEGVFLCAVSLFVVLQKYLRDDLYELYHVHQY
AALLSSKRPWYINELAAQSLSFLVRKLPNKKSFLGMAFRKLKKDGSQVQGLGRVIATMIK
SDVTQRLHSATPQLLTLILDLLGDEEIPAGPALQTISYAVTNIASHVTTQHTDKSTKWQV
LWQEDATMVWPILWNTIDALVPRTGSSDASCHHLHSILQVVQILVTYKQGSLLVNLPDSI
RHCTALTQTPLPDDVGSTVFNIVANLLTTPHHQISTTTLHKAASMLLTSHHSHFVKFNFI
KQLLENARFDTELLPLLLQYLNNLVRTTEGEEIERDVLSMMGTLVLRKRPPCSTGAELSM
WTKYPLDFTQNLPAVESNIEKSVPSLIEKKISGGLKEDLSNMEELLLCLLCLPHVSPLDY
QDMTPYLTWILSDAVETLNDKTEKVIADDITVISKKKGKPKFEVLDFTRDLNIKYDIPLS
ARKILFLLGVLVEVMSHILTGEDFLAGLSQLQILGVLKQKKQYREDVHILRALDFHFTVA
SFEEDFDIMTESFFKDIYGVLAPALASANPQVRLLVTHIFSLFPVTLPTPPENLGVVENM
FQIMLKAESVAVTPWEYKDRLRFLSMIDADHIMYHRPVSGTYDLAPLLFYLGQLYINYKD
VWPPIIQAISSYAQVLPEELFWSLWFSRLKIVSHITCEVLHGKTVDPQEDLDFENEILLD
VVHHLARHQGFTRVPLKPDHLNYRDLLWKAMKRFPDVCEARNRDLVPMFLKFLEDELFPA
DFTVAPIQDISVRDGTDTSVSADTNLDQSLEKKPDNNNKSPKTKSALQENKNDQTHHRKA
PIKSLCEQLAVFSRFRNPRMLVQTKKLEKMYQEFLSHPSPGLQKLALDCIMTYNHRYLIP
YKESLYNILDDQAFKNALTLFSIDGSEQSVLEEHRSDLMPVLMRILYGKMHFKTGSNSSG
KAKISVRKAIVLRFLAGARESELSSFLELAFDVLMSHLEGTALDVVVRSREILNIQKVVP
LSRLQGALTTLENIIEKIGNLLTGKVPFLLKIILYIVNVVSLLLERRTEIYERNISFLKH
LRQQAQWRLSAFFQRFEDYCWSSEEIDAVFQAIVWPNLKRLPDEGISTPTPLLVLFQCWA
ENPRYFPLLAKYHEKDASLTPLPYIVKLLKHDKCSDSVAAVILNIVEKLLTLEDYNSASV
KDGEKVAEPLPLISHTVQVERLYSRDGKIQQNYGTALLVPHLDGLLQSMKSLVTKLGKGQ
YVTQRDLNILTNLTEWVTNKSVSDDLLSLIIPLIVKKHIKKEDKISQLLVTCSYLLPVVD
NGVQYLRQLISLFGCLESRQARGALCQAVSAIASVNQHFKYLADTAADLNAWNPKMVEEY
DFERRLGAYQRLNEYCKNQQSLEMEFCQLLLYNNAFVICQVDDSSLKDLSSVCLTQMIDM
FARLQPNQPNEFKQLMVDRFLPLIRLGLQSEKEGVRMEIISVLRYAVHTCHAHVDRLKDL
HKLADEIEEDLDFFSNMGHIQRHRRARAMAKLAEKLNSGELVFMTETLTDYLMPMSVVYL
FKETYASDDFLITSSVSCIGAFAKLLPWYPYQKMLRNYLSMLFKEDIKYLKLGVRVIDAV
LDSFHEDVEELDIALRKKPFEKNLALQSVKKYNKQVAPKVTEKNPEDVEVKEEEESGSGT
GDIISKPQKIYRALVNTIIPQIQRTLAAKTKADTEHKLNKSKYPEDNDIKRIPLAFALIK
LLKKLPKKVLDANVNSVLMKMITFLKCKSSSIREEARNMLVKIMIELGGVYLPWLVNDLQ
CILTRGFQAHVLVYTLHAVLSQLRPVLTAEHVDRCMAQMIDICKEDILGVQAEEKEVNQI
TSKVKEARSDRGYDILCFTAEFISAESLRDIILPLKDVLANTQDKKIVNKMIRCLTEIAN
GLERNENITITQKSLFIYGILNERLPEITVDKAGAKVTKKKGIERPDSFLLQPEPKRARL
NPKTSLRATAHVLIEFTLQFLCNLMKREKFVPKELEHQKLLDPYISVMAGCINSEYPEVS
LQALKCVNWLIKFPLPSLKKQLKSICNQMFVILDKFSSPELAKGKIYDLVQLSFKTLAII
IKTVEFYMLSEEEVRVLLQYVEGNLEDNSQQQTAFVVLQAIIARKIDAYELHSLMKHVQV
MSITCGRQYALNQARITYYTYLLTYPMKPKHVTANILHFLGNVSYTHEEGRLSASTMINT
IVANFPIKLISKDLETKMWFKLSEQLLKDESKENITLLHKALKTLFQRSRRKQMLTELCM
KLLEEEDSSVTSNLVAIQMAAKSLNAFLDVPVKLLPISLLSSVTPQIITLITPSRYCAQL
SIESQPNDSENLDMNIHLRQMDTTLCALLEVLTKVVGAFISNPQWSNLVSEEMWDNIQGH
LRYPHIQVRLSAASLVGRLLAAHPVEGETSPSLASSTARARSLVLDLCELLRTQASIGIP
LLTQLSLTVVRNLIYLIRHSCKVSLVLKTSKLSDVEAESESTKAENILQGEDAVAPSAVW
VIRRVGDMAYEELQNSGKEYTLVREALLNLMAGLVVAIGDKVKAPTLLTYMVKHLARELS
DEHVPESLITRTREVAVLVKECVGLETYTRHLTAAQVVLSKKRWERRARDHQQQAVNPHL
AMKKKKKKQEALKESKKRKIAERKGKAVKNKKMKLRDHVVVKG
NT seq
8412 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagaaacctcagcgtcaggctcacaaaaccaccaacaccttcaccttccggggg
tttggcgaaaaagtacgagctcttcgtgtcagcgcccggaaattccttctccagcgtcct
cagactgaagatggggagaacgtctccatattctaccagacacttatcaagtgcagagaa
cttaaccttactgaagcttttcaggcatttcagaatgatttgggcggggacattcagaca
acagtccagttgatccatcaggaagaacatgtggctcaatgtctggctgaacacttagcc
ataccaaggtctatggccttgcagtcacttctaaacctcttggtagcctttgccaatgat
atcccccaggagttctaccagcgtcatttttacaactttttgccgaaactggtggcacat
ctctcaactaaagatcctgaacaaatagaaggtgtatttctctgtgctgtttccttattt
gtagttttacaaaagtatctacgagatgatctatacgagttatatcacgttcatcagtat
gcagctttgctctcgagtaaacgaccgtggtatattaatgagcttgctgcccagagcctt
agttttttggtacggaagcttcctaacaagaagagctttttgggtatggcctttagaaag
ttaaagaaggatggaagtcaggtgcagggcttagggagggttatagcaacaatgataaag
tctgatgtaacccaacgcttacacagtgcaactcctcagttattaactctgatactggat
ctcttgggagatgaagagataccggcaggtccggcgctgcaaacaatttcatatgctgtg
acaaacattgccagtcacgtcactactcaacacacagacaagagtaccaaatggcaggtc
ttgtggcaggaggatgctactatggtgtggccaattttgtggaatactatagacgcactg
gtaccccgtacaggttcgtctgatgcttcctgccatcaccttcattctatcttgcaagtg
gtgcagattttagtgacttataaacaaggctcgttacttgtaaatctacccgattccata
aggcattgcacggctcttacccagactcctcttccagatgatgttggtagtactgttttt
aacattgttgccaatctgctgaccaccccacatcatcaaattagcaccacaactcttcat
aaggcagcatcaatgctcctcacttcacatcattctcactttgttaaattcaactttata
aagcaactgttggaaaatgcaaggtttgacactgagctgctgccactgcttctgcagtac
ctaaacaatttagtgaggactactgaaggggaagaaattgagagagatgtgttatctatg
atgggaactcttgtgctgcgtaagcgaccaccatgtagcacaggagcagaactgagcatg
tggacaaaatacccattggacttcacacagaatcttccggctgttgagagtaatattgag
aaaagtgtcccatcgttaattgaaaaaaagataagtggaggactaaaggaagatctctct
aatatggaagagttgctgctctgcttgttgtgtttacctcacgtgtcccctctggactac
caagatatgaccccataccttacctggatcctaagtgatgctgttgaaacactcaatgat
aaaacagaaaaagtcattgctgatgatataactgtaatctccaagaagaaaggaaaacca
aagtttgaggtgctagatttcactcgtgacttaaatatcaagtatgatatccctttgagt
gcaaggaaaatattgtttttattgggggttttggtcgaggtgatgtcacatattttgact
ggtgaggacttccttgctggcttaagtcaacttcaaatattaggagttttaaaacagaaa
aagcagtacagagaagatgtacatatcctgagagcattggactttcattttactgtagct
tcattcgaagaagattttgatatcatgactgaatcatttttcaaggatatttatggtgta
cttgcaccagctttggcctctgccaatcctcaagttcgtttactggtgacccatatattc
tcactattcccagtaaccttaccaacaccaccagagaatttgggtgttgttgagaatatg
ttccagattatgttgaaggcagaatcagtagcagtgactccctgggaatacaaggaccgt
ttgcgatttttgtcgatgatagatgcagaccacataatgtatcaccggccagtgtctgga
acatacgatttagctcctcttctcttctacctcggacagttgtatataaattataaagat
gtttggcctccaatcatacaggcaatttctagctatgcccaagttctgccagaagaatta
ttttggtcattgtggttttcaaggctcaagattgtctctcacatcacttgtgaagtacta
catgggaagacagtagaccctcaagaagatctagattttgaaaacgagatccttcttgat
gttgtccatcacctagcgaggcaccaaggctttaccagggtgccattaaagccagatcat
cttaattacagagatttattgtggaaagcgatgaaaagattccctgatgtgtgtgaagca
agaaatagagaccttgtaccaatgttccttaaatttcttgaagatgaactttttccagca
gactttacagttgctcccatacaagacatcagtgtcagagatggtacagacacctcagtg
tctgcagatacaaatcttgaccagagtttagagaagaagccagataataataataaaagt
cctaagacaaaatctgctttgcaagaaaacaaaaatgaccagacacatcacagaaaggca
cccattaagtcactatgtgaacagcttgccgttttttcacggtttcgtaacccaaggatg
ttggttcaaacaaagaaattagaaaagatgtaccaggaatttctaagccatccatcacct
ggtcttcagaaactagcccttgattgtataatgacatataaccaccgttatctcatacca
tataaagaaagtttgtacaatattttggatgatcaagcattcaaaaatgctttaacactc
ttcagtatagatggatcagaacaatctgtgttggaagaacaccgtagtgacttaatgcca
gtcctcatgaggatcctctatggtaaaatgcacttcaagacaggctccaacagttctggc
aaggcaaagatttcagtaagaaaagctattgtactaagatttttggctggtgccagagaa
tcagaattaagttccttccttgaacttgcttttgatgtgctaatgagtcacctggaaggt
actgccctggatgtggtggttcgaagccgtgagattcttaacatacaaaaagttgtacct
cttagtagactacagggagcactcaccactctagaaaatattattgaaaagattggaaat
ctactaacaggcaaagttcctttcttattaaagattattctttatatagtcaatgtggtt
tctttgctgcttgaacggcgaacagaaatatatgaacgcaatatatcttttctcaagcat
ttgagacagcaagcacagtggagactctcagcattcttccagcggtttgaagactactgc
tggtcgtcagaagagattgatgctgtcttccaagcaattgtgtggccaaacctgaaacgt
ctcccagatgaaggtatctccacccctacacctttgttagttctcttccagtgctgggca
gagaacccaaggtattttcctttgcttgctaaatatcatgaaaaagacgcttcacttact
ccattgccatacattgtaaagctgctaaaacatgataaatgtagtgactcagttgctgct
gttattttgaacattgtagaaaagttgctcactctggaagattacaacagtgcctctgtc
aaagatggagaaaaggttgcagagcctcttccactgatttctcacactgttcaagttgag
agactttattctcgtgatggtaaaattcaacaaaattatgggactgcactccttgtgcct
cacttggatggccttttgcaaagtatgaagagcttggttaccaaattgggtaaagggcag
tatgtaacccagcgtgaccttaatattctaacaaatttgacagaatgggtcacaaacaag
agtgttagtgatgatctcttgagtcttattataccactcattgttaagaaacatattaag
aaagaagataagatatctcagttacttgtaacctgttcataccttttacctgttgtagac
aatggtgtgcagtatttaaggcaactaatttctctgtttggttgcctggagagtcgtcaa
gcacgaggtgccctctgtcaagctgttagtgccatagcttcagtaaatcaacatttcaaa
tatctggcagatacagcagctgatctgaatgcatggaacccaaagatggttgaggaatat
gattttgagcgacgattaggagcataccagcgattgaatgaatactgcaaaaatcagcag
tctcttgaaatggaattttgtcagcttcttttgtacaataatgcatttgtcatttgtcaa
gtagatgattcatccttgaaagacttgtcaagtgtttgcttaacacagatgattgacatg
tttgctcgactgcagccaaatcaacctaatgagttcaagcaacttatggttgacagattc
cttccattgataagacttggccttcagagtgagaaggagggtgtgaggatggaaataata
tctgttcttcgctatgcagtccacacctgccatgcacatgtcgatagactaaaggatctt
cataaattagcagatgaaatagaagaagatttagatttcttcagtaatatgggacatatt
cagaggcataggagagccagagccatggcaaagttagcagagaagttgaacagtggagaa
cttgtctttatgacagaaactctcacagattaccttatgccaatgtcagttgtttatctt
tttaaggaaacttatgcctcggatgattttctaataacaagttcagtaagttgcattgga
gcatttgcaaagctcctgccttggtatccttaccaaaaaatgctacggaattacttgagc
atgttgtttaaagaagacattaagtatcttaaacttggagtgagggttatagatgctgtg
cttgatagttttcatgaagatgttgaagaacttgatattgccttgagaaagaaaccattt
gaaaaaaatcttgctttgcaaagtgtgaagaaatataacaagcaagttgctccaaaagta
acagagaaaaatcctgaagatgtagaagtgaaggaagaggaggagtccgggtcgggcaca
ggggacatcatcagtaaaccacagaagatttatcgtgcactggtcaacactattatccca
cagattcagaggactctagcagccaaaaccaaagctgacaccgagcacaagttgaacaag
agtaaataccctgaggataatgacattaaacgtatccctcttgcatttgcactaataaaa
cttcttaaaaaacttcctaaaaaggtgcttgatgcaaatgttaacagtgtgcttatgaaa
atgattaccttcttgaaatgtaagtcgtcgagtatacgtgaagaagctcgtaacatgctt
gtaaaaattatgattgaattgggtggtgtttacctaccttggctggtgaatgatttgcag
tgtattcttaccaggggtttccaggcacatgtgttagtttacacgctgcacgcagttctc
tcccagttacgtccggttctgactgcggaacacgtggaccgatgcatggcacagatgata
gacatttgtaaggaagatattcttggtgtgcaagctgaggagaaggaagtgaaccagatt
actagcaaggtaaaggaagcaagaagtgacagaggctatgacatattgtgtttcactgca
gagtttatatcagcagaaagtctcagagatataattttaccattaaaggatgttttggct
aatacacaagacaagaaaatagttaataagatgattcgatgtttaactgagattgccaat
ggacttgaacggaatgaaaatataaccataactcagaaatctttatttatatatggaatc
ctaaatgaaagattacctgaaataacagttgataaggcgggagcaaaagtaactaagaag
aaaggcattgaaagaccagattcattcctccttcagccagagccaaagagagcaaggctt
aacccaaagacttcactgagggcaactgctcatgttttgattgaatttactctgcagttc
ttgtgtaacctgatgaaaagagaaaaatttgttccaaaagagcttgagcaccagaagtta
ctggacccttacatttctgtgatggcaggttgtatcaactctgaataccctgaggtgagt
ctacaagctctgaagtgtgtcaactggctcattaagttccctcttccctcacttaagaag
caattaaagagcatatgtaaccagatgtttgtgatcttggacaaattttcttccccagag
cttgctaaggggaaaatctatgaccttgttcagttgtcttttaagactttagcaataatt
atcaagactgttgagttttacatgttgagtgaagaagaggtgcgtgtgttgttgcagtat
gttgaggggaatcttgaagacaatagtcaacaacaaactgcttttgttgttctccaagcc
ataattgcaaggaagatagatgcttatgaactgcattccttgatgaagcacgtccaggtg
atgagtataacctgtggccggcagtatgccctgaatcaagcgcgcattacctactacacg
tacctgctcacttacccaatgaaacccaaacatgtcactgccaacattctacattttctt
ggcaacgtgtcatacacacacgaagagggccggctttcggcttcaaccatgattaatact
atcgttgcaaatttcccaattaaactcattagcaaggatttggaaacaaaaatgtggttc
aaattatctgaacagctgttgaaggacgaatcaaaagaaaatattacccttttacataaa
gcgttgaaaactctgtttcagagatcaagaaggaaacagatgttaactgagttgtgtatg
aagcttttggaggaagaagatagcagtgttacatcaaatttggtagccatacaaatggct
gccaagtctctaaatgccttccttgatgtgcctgttaaactgttaccaatcagtcttttg
tcaagtgttacccctcagataatcactctcattactccatccaggtactgtgcccagctt
agcattgagagccaaccaaatgactctgaaaatttggacatgaatattcatcttcgacaa
atggacacaactttatgtgcactattggaagtgttaactaaggtggtgggagccttcata
agcaatccacaatggagtaatcttgttagtgaggagatgtgggacaatattcaaggtcat
ctgcgctacccacacatacaggtgagactgagtgctgccagcctggtaggtcgtctgtta
gctgctcatcctgttgaaggggagacgtcaccctcactcgcctcctcgactgcccgagca
cgttcacttgtattagacttgtgtgaacttcttcgaacgcaagcttcaataggcattcct
ctcctgactcagctgtcactaacggtagtgaggaacctcatatatctgattcgtcactcg
tgcaaggtctcattagtactcaaaacctctaaattaagtgatgttgaagctgagagtgaa
agtacaaaagctgaaaacattcttcaaggggaagatgctgttgcacctagtgcagtttgg
gtcattcgtcgtgttggtgatatggcttatgaagagcttcagaatagtggaaaggagtac
actttagttagagaagcattgttaaatctcatggctggtttagttgttgccattggagac
aaagtaaaagcacccactctactcacctatatggtaaaacatcttgctcgtgagttatcc
gacgaacacgttcccgagtctctcattacacgaactagggaggtagctgttcttgttaag
gaatgcgttggtttagagacgtatacccgtcacctcaccgcggctcaagttgtcctctcc
aagaagcgatgggaaagacgtgcccgtgaccaccagcagcaggctgttaatccacatcta
gcaatgaaaaagaagaaaaagaagcaagaagcattaaaggaatcgaaaaaacgaaaaata
gccgagagaaaaggaaaagccgtaaaaaataagaagatgaaactaagagatcacgttgtt
gtgaagggttaa
DBGET
integrated database retrieval system
