Homarus americanus (American lobster): 121862261
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Entry
121862261 CDS
T07477
Name
(RefSeq) exosome complex component RRP43-like isoform X1
KO
K12586
exosome complex component RRP43
Organism
hame
Homarus americanus (American lobster)
Pathway
hame03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121862261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hame03019
]
121862261
Messenger RNA biogenesis [BR:
hame03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
121862261
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
121862261
NCBI-ProteinID:
XP_042216299
LinkDB
All DBs
Position
Unknown
AA seq
279 aa
AA seq
DB search
MTSLETWKTFEPESYYKSFLEKNKRPDGRGLMKVRPITIKIGTVTTAEGSSTVRVGHTTV
MCGIKAEIATPALRNPDEGFIVPNVELYPCSSPKIKMGPPGEKAMGTSQFLKNVLHSSGV
LDLKDLCIVPNKLAWCLYCDVACINYDGNLYDAALTAIMAALQNVRLPVVSYDAENDKTS
VASERTLPLMIKAKPVSSTFTIYSDGIQLMDPTAEDESQGSGEVVVVLLENGSLCTTHKP
GGQLILPNILDDFVKLAKKRVKVVNNLIDRVLTERMDTS
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgacctctctggagacctggaagacttttgaacctgagagctactacaagagcttcctg
gaaaagaacaaaagaccagatggccggggactgatgaaggttcgacccatcaccatcaag
attggaacagtaacaacagctgagggttcttccacagttcgggtgggacatactactgtt
atgtgtggcataaaggcagaaatagccaccccagctctcaggaacccagatgaaggcttt
attgtacctaatgtagagctgtacccatgtagctctcccaaaattaaaatgggaccacct
ggagagaaggccatgggcactagtcaattcctaaaaaatgttttgcacagttcaggagtg
ctggacttaaaggacctttgcattgtccccaacaagcttgcctggtgtctctactgtgat
gtagcttgtataaactatgatggcaacttgtatgatgcagcactgacagcaattatggca
gctttacaaaatgtgaggttaccagtggtttcatatgatgcagaaaatgacaaaacttct
gttgcttcagaaagaactctcccattaatgataaaggccaagccagtatcatcaaccttt
accatatacagtgacggtatacagctaatggatcctacagcagaagatgaaagccagggg
agtggcgaagttgttgtggtgctcttggaaaatggttccctgtgcaccacacacaagcct
ggtggtcagctcatcctacccaacatcctggatgactttgttaaacttgctaagaaaaga
gttaaggttgttaacaatttaattgatagagtccttactgaaagaatggacacctcatag
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