Homarus americanus (American lobster): 121862362
Help
Entry
121862362 CDS
T07477
Name
(RefSeq) exosome complex component CSL4-like isoform X1
KO
K07573
exosome complex component CSL4
Organism
hame
Homarus americanus (American lobster)
Pathway
hame03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121862362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hame03019
]
121862362
Messenger RNA biogenesis [BR:
hame03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
121862362
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
121862362
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ECR1_N
EXOSC1
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
121862362
NCBI-ProteinID:
XP_042216536
LinkDB
All DBs
Position
Unknown
AA seq
238 aa
AA seq
DB search
MCENKRPVKLRLFIPVKLTSPLATSIFVVITLYEENNSTFYSNMKSGNGHILCSPGQRIC
GASSCLIAGEGTYTFNKYIYASLAGHVTVIPRGEVQVVKVTLGREGTVMPEAGSVVTCRV
LSVNPNLTTVSIICVGPNKLHSPVSGTVRKQNVRDHQVDTVEMYNCFRPDDIILAVVLSL
GDLRNYELSTAGTELGVVTAYCEEGHPLVPASWTTMKCKCRTERRKVAKVMPPKSSHT
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaaaacaaaaggcccgtcaagctgcgactgtttataccagtgaagttgacatca
ccactcgccacttctattttcgttgtaatcaccttgtatgaagaaaataacagtacattc
tactcaaacatgaagtctggcaatgggcacattctctgttctccggggcagagaatatgt
ggagcaagtagctgcctcatagccggtgagggaacctacaccttcaataagtatatctac
gcctcccttgctggacatgtcacagtcatccccagaggagaggtccaagttgtgaaggtc
acgttgggacgcgagggcacggtgatgccagaagccggtagtgtcgtaacgtgccgcgta
ttgagcgtcaacccaaacctgacgacagtatccattatatgcgtcggtccaaacaagctt
cactcacccgtttccggcactgtcaggaaacaaaatgtccgggatcaccaagttgacacg
gtggaaatgtacaattgctttcgcccagatgacataatactggcagttgttctctccctc
ggtgatctgcggaactacgagctttctacggctggtacggagctcggggtcgttactgct
tactgtgaagagggccacccgctggttcctgcctcctggaccacaatgaagtgcaaatgt
cgaacagaacgaagaaaggtggccaaagtgatgcccccaaaaagttcacatacctaa
DBGET
integrated database retrieval system
