Homarus americanus (American lobster): 121862409
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Entry
121862409 CDS
T07477
Name
(RefSeq) DNA polymerase beta-like
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
hame
Homarus americanus (American lobster)
Pathway
hame03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
121862409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hame03400
]
121862409
Enzymes [BR:
hame01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
121862409
DNA repair and recombination proteins [BR:
hame03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
121862409
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
121862409
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
HHH_8
DNA_pol_lambd_f
HHH_5
NTP_transf_2
DUF4332
Motif
Other DBs
NCBI-GeneID:
121862409
NCBI-ProteinID:
XP_042216615
LinkDB
All DBs
Position
Unknown
AA seq
333 aa
AA seq
DB search
MSNKRKNPTSENNLNASVCELLLEIAEYERNVNRNVHKYNAYRNAASTLAKHPKKITSGS
EAKKLKGVGSKIGDKIDEYIKTGEMGKVKKIRADDTNVAINLLARVSGIGPAKARELIND
GITTIEDLRKNQDKLNHHQIIGLKYFEDFELRIPRDEIKLIEKQLKEHIGEFDSKYLVTI
CGSYRRGAKSSGDVDALLTHPSYTSESSKCPSLLSKVTQVLKDHGLVTDTLSQGDSKFMG
VCHLMEGLPHRRLDIRLLPHDQYYCGILYFTGSDMFNKAMRQHALDKGFTLNEYCIRPVG
STGVPGEALPVSCERDIFDYIDYDYKEPHERNA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataagaggaaaaacccgacaagtgaaaacaacctcaacgcttctgtttgtgaa
ttattattggaaattgcggagtatgagcgaaacgtaaaccgcaacgttcacaagtataat
gcctatcgcaatgccgcttcaactctggcaaaacatccaaaaaaaatcacgagtggaagt
gaagcgaagaaactgaagggtgttggtagcaagatcggtgataagattgacgagtacatc
aagaccggagagatgggaaaagtgaaaaagattcgtgctgatgatacaaatgttgccatc
aatcttctggcacgtgtgtcaggcattgggccagccaaggcccgggagttgataaatgat
ggtatcacaactatagaagacctgcgtaaaaatcaagacaagctcaatcaccaccagatc
attggattaaagtattttgaggattttgaattgaggattcccagagatgaaattaaattg
attgagaaacagctgaaagaacacatcggtgaatttgactccaagtatctggttactatc
tgtggcagctataggcgaggagccaagagcagtggtgatgttgatgcattactgacccat
ccctcctatacatctgaatcaagcaagtgtccttcattgctaagtaaagtgactcaagta
ctcaaggaccacggcctagtgacagacactctctctcagggtgactctaaattcatgggt
gtgtgtcatcttatggagggcctccctcataggcgtcttgacatacgactgttgcctcat
gatcagtattattgtggaatactctatttcactggttctgacatgttcaacaaggccatg
agacaacatgcattagataaaggcttcactctcaatgagtactgcattagacctgttggc
agtacaggtgtaccaggggaagcattaccagtgtcctgtgagagggacatattcgattac
attgactacgactacaaagagcctcatgaacgtaatgcataa
DBGET
integrated database retrieval system