Homarus americanus (American lobster): 121862425
Help
Entry
121862425 CDS
T07477
Name
(RefSeq) uncharacterized protein LOC121862425 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
hame
Homarus americanus (American lobster)
Pathway
hame03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
121862425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hame03400
]
121862425
DNA repair and recombination proteins [BR:
hame03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
121862425
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
MutL_C
HATPase_c
WW
Motif
Other DBs
NCBI-GeneID:
121862425
NCBI-ProteinID:
XP_042216642
LinkDB
All DBs
Position
Unknown
AA seq
1899 aa
AA seq
DB search
MSSKILPLPESVRSQLRSGITITSVAQCVEELVLNSLDASATCIAVRVDLSIFRIQIVDN
GHGVSHGDLKYLGTRHATSKCHTLDDLNSNLSHYGFRGEALASIIDMAAIVDITTRPRGS
TKTFSKLFTYGKEKSVSNAKTPRPSVGTTLTIQDFMYNMPVRRKLIKEAIDIETIRKRLE
SFALMHPKVSLNLRNDTNNIVVMQTSKTSCIMSTFMQLFGADKAQTLAEVEHTLDQFTVT
GYIGTHPHLTKALQFVYVNKRVILKTKIHKMINALLSKSSIISTRLHPTSTGSGKNPSSP
AKGMNLYCIFLINIECPYSEYDICLEPKKTLVEFKDWDKLLICIEEMIIKFIEEENLVIS
IDERYRRSGKDQEVDDEVSSTVSQSSPSLLQMFSLKRNIEEKNEPGTHTEKYGHTICTQD
NLLAVHSLPVKRIKKRHKSSESSDNIDMNEDNAGNSDKVHENINQRINSVNGKNLHHRDA
PSKDNFPKPSNSVSKVEMPHTEANKVLIEECTFRGDKNSSDFPISENTGNVLFSSLEEFK
NVIADSSVGSDESLSGQDNFRVKPGSVTLVETSVIQRDPERTSDNEGCGNKSSEHLHENF
SSLEEFMKFYNADKRKTELESYKTPEQAVLHPPTSPPPLKTTKRFLSTSQDGGGEILSVV
RLRSDVKKNNETKSLCKTLSSKWKKHQSKMQKIQTLQNFEYQKTNAVPVHASHTLNKNEH
IIQKDSDKYGDNIPSSFSQSQERAEACVSGAVESQEVNCNTNTEDLDISFRFEPVILKKI
GEDEIKIKLSDRKDHMEYPGSCNVLPITYNRIKTQNDAHSVERKTICSNSPPEIFHCNMK
VDHQGVPERSKALHNYAENYNPFPEIIPIIQVEQPKKNSTLRSEVFSPSNHKVVLGPTPQ
TRVENDILRQNSEIVDINSRTAVTVGSSRETFSPPESLRHYQYSSVIRPLCKGGSRCREF
LEKGTETDPQMSSSSSRLCLRLKIPKTDCEKLMDEVDINGPKRNNKESCMTDRMNIATST
QPFEVEGILENKKSNNLHCEDMQKESGAIQQSQGFILSDLYPGSQNKEMHNSSSCQDKDK
SNSVPVQETQGFTPKDLIENFHIEASKTGAHKTFEGILESDPMTVFQKIDSILGDLESTT
AGKNGTNTCEESEQVDNVVQNINQVEARGIDTSDTKTAVSSQVLNNSDEDLIQGQNIQFC
NKNERTKAQPDLPLLPSGEIQKSTFDVTSSSNSPDMKVISSDNTQSPDPFSESLHISQLT
LPEDVAETQQLYQETSNKVTCDMENIGSINMSLSSMSSFSNRMTHKTEKEMPSRKDKECQ
KECVENSGDGIQCNVNIASLLSSSKKNTQNLESNCVDSLGSDSEFLYKKTGAIGIEELDK
TRTVNGQSDDDMTQCSTLDNINKSDEPRDTSSQSEGTLCLGNRWKEVCDKDGKKVYVDLH
TGNTSYDPPQLGPAPEWTSSQPLGAPLLKVPLSNEPWYNPVRKGSERRPAFSLSHGFSAF
MSWKKTRDLEKNMDLSRKCKTTALDVGSSNSKDNLESNIVLEEGGRHGGESNSNSFVTTK
VKEAINSVLKDLEADDDTIKWSNKPPAGLQQDMSEPSEVVQICRLWEAPNFAMDADILTS
EALATTAERGAITQKEGGVRVYNIVHPYKFSREMLQSCKVLGQLDKKFIACNIEYTSHDH
HEQRSSQLIVLFDQHAVHERVRLETIIQENYETLDSGESVIRSSIVKPPLEMSLPADEVR
LMMAYSEVFSQRGLQFTKISTSKVSFQSIPSCLVAKEASEVRHKRCQTANAIVESIVRDM
CHTLHQTTGVVGAMPKPITYVLNSQACRGAVKFGDELTLSQCQELISSLCSCQLPFQCAH
GRPSIVPIVNLTHLTRINKKDTKPNLQKLRDMIQDRTTH
NT seq
5700 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccaagatcctcccattaccagagtcagtgagatcacagttgcgctcaggaata
actatcacctctgttgcccagtgtgtggaagaactggttttaaatagtcttgatgctagt
gcaacttgcatagcagtcagagtggacctcagcatatttagaattcagattgtggacaat
ggccatggagtgagtcatggtgatctcaaatatctaggaacaaggcacgcaacaagcaaa
tgtcacactctggatgatctcaacagtaacttgtcacattatggattccgtggagaagct
cttgctagtattattgatatggcagctattgttgacatcacaactagaccccggggctcg
accaagaccttctcaaaacttttcacttatggaaaagaaaaaagtgtcagtaatgctaaa
accccaagaccaagtgttggtactaccctgacaattcaggattttatgtataacatgcca
gttagacgaaagttgatcaaagaagccattgacattgagactataagaaaacgattggaa
agttttgccttgatgcatcccaaggtctccctcaacttgagaaatgacacgaacaacata
gtggttatgcagacatctaagaccagctgtatcatgtcaaccttcatgcagctgtttggt
gcagataaagcccagacacttgcagaagttgaacatacacttgaccagtttacagttaca
ggatatattggcacacatccacacttgactaaagctctgcagtttgtctatgtaaataaa
agagttatattaaaaacaaagatccacaaaatgattaatgctctgctttctaaaagttcc
atcatcagcactagacttcatccaaccagtacagggtcaggaaaaaatccttcaagtcct
gcaaaagggatgaatctttattgcatatttttgataaatattgaatgtccttacagtgag
tatgacatttgtcttgagccaaagaaaactttagttgaattcaaagactgggataaactc
ttaatttgtattgaggaaatgataatcaaatttattgaggaagagaacttggtgatctca
attgacgaaaggtatcggagatcaggcaaagatcaagaggtagatgatgaagtcagttca
actgtgagtcagagcagtccatcactacttcagatgttcagcctcaaaaggaacatagaa
gaaaagaatgaacctggtacacacacagaaaagtatgggcacactatttgcacccaggat
aacttattggccgttcatagcttacctgtcaaaagaataaagaagagacataaaagttct
gaaagctcagataacatcgatatgaatgaagataatgctggtaatagtgataaagtacat
gaaaatataaaccaacgtattaacagtgttaatggaaaaaatttgcatcaccgagatgct
ccttcaaaagataatttccccaaaccatcaaattctgtatctaaggtagagatgccccat
actgaagcaaataaggtactgatagaagaatgtacatttagaggtgataaaaattcaagt
gattttcctatttcagaaaatactggtaatgttttgtttagttctttagaagaatttaaa
aatgttatagcagacagtagtgttggaagtgatgaatcattaagtggacaagataatttt
agagtgaagcctggtagtgtgacattagtagaaacatcagtgattcagagggatcctgaa
agaacatctgacaatgagggttgtggaaacaagtctagtgaacatttacatgaaaatttt
agttccttagaagaattcatgaagttctataatgctgataaaagaaagaccgaacttgaa
tcatacaagactcccgaacaggcagtgttacacccgcccacatcacccccaccactgaaa
accacaaaaaggtttctctctacgtcacaagacggaggaggtgaaatactctcagttgtt
agattgcgatcagatgttaaaaagaataatgaaacaaaatccctttgcaaaaccttaagc
tctaaatggaaaaaacaccaaagcaaaatgcaaaaaatacagactcttcaaaattttgaa
taccaaaagacaaatgcagtgccagttcatgcaagtcatactctcaataagaacgaacat
ataatacaaaaagatagcgacaaatacggtgacaatattccatctagtttttcacaatct
caagaaagagcagaagcttgtgtctccggggctgtagagagtcaagaggtaaactgtaat
acaaatactgaggatctagatattagctttaggtttgagccagttatcttaaagaaaata
ggcgaggatgagattaaaataaaattatcagatagaaaagatcacatggaatatcctgga
tcatgtaatgtcctccctatcacttataacagaataaaaacacagaatgacgctcatagt
gttgaaagaaagactatctgctcaaattctcctccagaaatatttcattgtaatatgaaa
gttgatcatcaaggagtcccagagagaagtaaggcccttcataactatgcagaaaactat
aatccatttcctgagattattcctattatccaagtcgaacaaccaaagaaaaatagtact
ctaagaagtgaagtcttttcaccatcaaatcataaggtggtgttaggcccaactccccaa
actcgagtggaaaatgatattttaagacaaaattctgaaatagttgatataaattctagg
actgcagttacagttggatccagccgtgaaacatttagtccaccagagtcattaagacac
tatcagtattcaagtgtaattagaccattgtgtaagggaggatcacgatgcagggaattc
ttggagaaagggacggaaactgatccacaaatgtccagttcatcgtctcgcttgtgttta
agactaaaaatacctaagacagattgtgaaaaacttatggatgaagttgatataaatgga
cctaaaagaaataacaaagaatcctgtatgactgacagaatgaacattgccacctccaca
caaccttttgaggtagaaggcatcttagaaaacaaaaaatctaataatttacactgtgaa
gacatgcagaaagaaagtggtgccatacaacagtcccaaggttttatactttcagattta
tatccaggttcgcaaaacaaggaaatgcacaactcgtcaagctgtcaagacaaagacaag
agtaacagtgttcctgtacaagagactcaaggttttacaccaaaagatttgattgaaaac
ttccatattgaagcttcaaagacaggagctcacaaaacttttgagggtatattagaatct
gatcctatgactgttttccaaaagattgatagcattctaggagatctggagtccacaact
gctggcaagaatgggacaaatacctgtgaggaatcggaacaagtggataatgtagtccaa
aatataaaccaagttgaagcaagaggcatagacacttctgacacaaagactgctgtttca
tcacaagttctcaacaattctgatgaggatcttattcaaggccagaatatacagttttgt
aataaaaatgaaagaacaaaggcacaacctgatttgccattgttaccctcaggtgaaatt
caaaagagtacattcgatgtcacaagcagtagcaacagccctgacatgaaagtaataagc
tcagataacactcaatcaccagacccattctctgagtctcttcacatctcacaattgact
ttaccagaagatgtggcagagactcagcaactgtatcaggaaacatccaacaaagttact
tgtgacatggaaaatatagggtctatcaatatgtccttaagcagtatgtcttccttttct
aatagaatgacacacaagacagagaaagagatgccctcaagaaaagataaggaatgtcaa
aaagaatgtgtggaaaatagtggtgatggcatacagtgtaatgttaatatagcatctctg
ttatcatcatcaaaaaaaaatacacaaaatttggaaagtaattgtgtagacagtttgggt
tctgactccgagtttctttataaaaaaacaggagctatcggaatagaagaattagataag
actaggactgtaaatggtcagagtgatgatgatatgacccagtgttctacattagataat
attaacaagtcagatgaaccacgagacaccagctcccagagtgaaggtacattatgctta
ggtaacaggtggaaggaagtgtgtgataaagatggaaaaaaggtttatgttgatctacac
actggtaacacatcatatgacccaccacaactggggcctgcccctgaatggaccagtagc
cagccacttggagcacctctactcaaagtaccattatcaaatgagccatggtataaccct
gtcagaaaaggttcagaacgtagacctgcttttagtctcagccatggcttcagtgctttt
atgtcatggaaaaaaactagagatcttgagaaaaatatggatttgagcagaaaatgtaaa
actaccgcattggacgtaggatcgtcaaacagcaaggataatttggagagcaatattgtg
ttggaggaaggaggcagacatggaggtgagagtaacagtaactcatttgtgacaactaaa
gtcaaagaggccataaattcagtgttgaaggatcttgaagctgatgatgataccataaag
tggtcaaataaaccacctgctggactccaacaggacatgtctgagccttcagaagttgtt
cagatttgtcggctatgggaagctccaaactttgccatggatgctgatatcctgacctca
gaagctctagcaacaactgcagaaagaggagctataacacaaaaagaaggtggggtgagg
gtgtacaatattgtccatccatacaagttttccagagagatgctccagtcgtgcaaggtg
cttggacagttggacaaaaagtttatagcatgtaacattgaatacacttctcatgatcat
catgaacaaagatccagccagctgattgtcctctttgaccaacatgcagttcatgagaga
gttcgcttagagaccatcatacaagagaattacgaaactcttgactcgggggagtctgta
atacgtagttcaattgttaagccccctcttgagatgtcacttccagcagatgaagtcaga
ctgatgatggcatattcggaagtgttttctcagcgaggcctacagttcactaagataagt
acctcaaaagttagtttccagtcaatcccaagctgcttagtggctaaagaagcaagtgaa
gtgcgtcacaaacgttgtcagacagctaatgccatcgtggaaagcattgttcgcgacatg
tgccatacacttcaccagacaacaggcgtagtaggggccatgccaaaacctattacatat
gtgctaaatagccaggcgtgtagaggagctgtcaaatttggggatgagttaacattgagt
cagtgtcaagaactcatctcttcactgtgttcatgccaactgcccttccagtgtgctcat
ggccgcccatccatagtccctatagtcaatcttactcatctaacaaggataaataagaag
gacaccaagcccaacctacaaaagttaagggatatgatccaggacaggactacacattga
DBGET
integrated database retrieval system
