KEGG   Homarus americanus (American lobster): 121862431
Entry
121862431         CDS       T07477                                 
Name
(RefSeq) nucleoporin NUP188-like
  KO
K14311  nuclear pore complex protein Nup188
Organism
hame  Homarus americanus (American lobster)
Pathway
hame03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:hame00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    121862431
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hame03019]
    121862431
Messenger RNA biogenesis [BR:hame03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     121862431
SSDB
Motif
Pfam: Nup188_N-subdom_III Nup188_N Microp_apicomplexa_32
Other DBs
NCBI-GeneID: 121862431
NCBI-ProteinID: XP_042216661
LinkDB
Position
Unknown
AA seq 1622 aa
MEPVEVVSGKALWGVICGTYVLPSDEVVGAELQLAAPHLRVGLAAYKKPTDNHYKTWADT
AEATQAEKDFVKKLSQLLDLAAVHSWEVFQLFLLHEYRGAEASLVEVLASQRDEETFLAQ
LWSFYLSDRLHLLRCLRHIVANTANRQHPYQSLFGDFMQDVLDKDGTLGESLVQQVLLCT
RMVSPTPQTHGPHLPSHGPHTWLAHHLAELREVLATLLVYYGSTTRSPTPDTFKKLVQLA
QGGGLAGRSEIQEGLRDSHGPLVEALDATHMLLLILAINADSPTSGHNLCDSGWVSKLDP
IMAGLGARTPHLAPLLAWAVLQLRTSGGTSSGHPKIYHKLAQRALHGNVFGYLQTALNNT
AIKGDELLLRLGSSVVYSLVCAAAGSLDLDRVDYLPVLNSLAKNCLAHDPPAHLFWSEEG
GGAGLLLPQALQVFPHDVEPLLSLTTALALANPESCHKVVELLSELPSITWVVPEAESQN
IQIRLSDCYTTGPLHLMPTVTVATHTRGMLISTEPLVVMWQMETNAWQGLLAIMKLLDNE
VGGGASLLDPRLITAVSATMRLLSSVLTTVPTQLPALIHFVHQTVGLLHKVSQVTRPPGA
LVAALLEFLAEVATQDAKQVWAELEGSPLLPFLASSQNTVGVKRGKGDPFLGYRAGGLRA
LVCGEEAAMGKYPILCSYTRLLTAAIKGGVSSGCVRGGVVFMAREVTGALLRWCYSNQEE
REIVLDHCLALLHHTLEASKMDTSVRDLVVRQLVDRSSAGQTLLSVVVSGASLESALNHP
THSPISTHAHRLTRTAQMALSILHRLVGEDSSMGGLSQLLRAAPSLGVTLGGGGRSLGSS
SPPHLALTVALYAHQRLNPRLSYLALRTLTRFAQKLDVPLVACFGSEADGIRDALLRRLD
SATEDVRVKVALLRLLTASTTRQQGLTNAFLTPPEKLLDPLTSLANPSTRNESGRELALA
VVELLDALWSEKYTTATVYLQDKEDFWKALIHPITTGKPGEVSDAVVGHSLKVVARQVFS
SNTKPSASLRSAMDQLCNPDTGAICQWSKHIVMSLESGSSSNKDVSELLLPAWRDFVVVL
VARAKSWLSSDQKVNLASDILHALLHQLELDTVDETLTILLAELYLSLVKHCGKQLAEKA
DIYIRIGKLLVMVQEAVMSTPTHCQLLILGAALRMVTLTEVSHQSQGQVLSLLSPVVGLI
QQHGRLAGSEGHSCTSASTLGVATSLLHQCLLRCPVDTAQLHLTHSNVIPALLNATEIYM
KIGEEEVVGELLRLLATLSRISQLSEEFCSQSISSTLVIPPSKTDLLSEVVWGVVWGVHH
EGVGGVEGSVNVAAVHLSALCGSLAAPHRQPGLALATAALVTALAPHASLWIVLHPASHS
QLTAATTRCINLTTHLLCTPRVVQMELSGERTSSSVTSDSSATTTTISPNTTAVLDQMLK
VLCACLGAIRSLGPDLTDLLCGPGIDVAAWTLFFHPSFRPVSAHDPSAQPSLASLTSVLD
LYDSHASKESRGVSPCRGGAPEVGLSVRVLATSAEQALLLLLTQSTLALMSAETSPRDAL
RVRHGLADEMNSFFMRWLGRRPAVSPLPSTSTAVPGVSSSVHIDLTYLRLAQQLVGRLCA
TK
NT seq 4869 nt   +upstreamnt  +downstreamnt
atggaacctgtagaagttgtcagtggtaaagctctgtggggagttatatgtggcacctat
gttttaccatcggatgaagtggttggtgcagagctacagttagctgccccacacttgagg
gttggtttggcagcatataaaaaacccactgataaccattataaaacatgggcagacaca
gcagaagccacacaggcagaaaaggattttgtaaagaagctctcacagttgctggattta
gctgcagtccatagctgggaagtgtttcagctgttcttactacatgagtatcgaggtgca
gaagcctccttagtggaggtcttggccagccagcgtgacgaggaaacttttctggctcag
ctctggagtttttatctcagtgatcgcttacatcttctccgctgcctgagacacattgtt
gcaaatacagcaaaccgacaacatccttaccagagtttgtttggtgacttcatgcaggat
gtcctggacaaggatggtactcttggggagagtctagtgcagcaagtattactgtgtacc
agaatggtttccccaacccctcagactcatggcccacatttgccctctcatggccctcat
acatggctggcccaccacctggcagaactgcgagaagtactggccactctccttgtatac
tatggcagcaccactcgctctcctactcctgacacatttaagaaacttgttcagctggca
cagggaggaggactggctgggcggtcagagattcaagagggtttgcgggacagccatggc
cccttagtggaggcccttgatgctacacatatgcttctacttatccttgccattaatgct
gattctcctacaagtggtcacaacctatgtgatagcggatgggtaagcaaattagatccc
atcatggctgggcttggtgcccgaacacctcaccttgctccattactagcctgggctgtg
ctgcagttacgaacaagtggtgggacatcctcaggccaccctaaaatataccataagctt
gcccagcgtgctttacatgggaatgtctttggctatcttcaaacagccctgaataatact
gctattaagggagatgaattacttctacgtcttggatcatctgttgtgtattccttggtg
tgtgcagctgctggctccttggatttggacagggtagactatttaccagtcttaaattct
ctagccaagaactgcctcgcacacgacccccctgcacatctcttttggtctgaagaaggt
ggaggagctggtctgctgttaccgcaggcattacaagtattcccacatgacgttgaaccc
ttattatctctcactacggctctggctctggcaaaccctgagagttgtcataaggtggtg
gaacttctcagtgaacttccatctatcacttgggttgttcctgaagccgagtctcaaaat
atacagatacggttaagtgattgttatactacaggtcctctacacttgatgccaacagtg
acagtagcaacacatacacgtggaatgttgatttcaactgaaccattggttgtgatgtgg
cagatggaaacaaatgcctggcagggactccttgctatcatgaagctgcttgacaatgag
gtgggtggtggagcaagtctgttggaccccagacttataacagcagtgtccgccaccatg
cgccttctctcttctgtgttaactactgtgcccactcaactgccagccctcattcacttt
gttcatcaaactgttggattacttcacaaagtgtcacaggtgacccgaccccctggagca
ctggtagcagcactgctggagttcctggcagaggttgccactcaggatgcaaaacaggtg
tgggcagaacttgaaggcagcccactactgcccttcttagcttcttcacagaatacagtt
ggagtcaagagaggcaagggggacccattcctcggatatcgtgcaggaggcctccgtgcc
ttggtctgtggagaggaagcagccatgggcaaatatcccatactctgttcttatactcgc
ttactaactgcagccatcaagggaggtgttagcagtggttgtgtaaggggtggcgttgta
tttatggccagagaggtaacaggagctctgctgcgctggtgttacagcaaccaggaggag
agggagattgtgcttgaccactgcctagcccttctacaccatacactggaagcttccaag
atggacaccagtgttcgtgatctagtagtgaggcagcttgtagacagaagcagtgctggt
cagacactgctgtcagtggttgtgagtggggcaagtttagagtcggcattaaaccaccca
acacactcccccatatctacccacgctcacagactcacacgtacggcccagatggctctt
tccattctccacaggttagtaggtgaagacagcagtatgggaggcctaagtcagcttctt
cgtgctgcaccgtccctgggagtgacgctgggtggtggaggacgctcacttggcagtagc
agtcctccacacttggcgttaactgtggctctatatgcccatcagcggctcaaccctcga
ctctcctacttggctcttcgcactcttacacggtttgcccagaaacttgatgtacctttg
gtggcatgttttggaagtgaagccgatgggattcgagatgcactcttacgacgcttagac
tcggcaacagaagatgtacgagtgaaggtcgctctgttacgtctcttaacggcttctaca
acccgccagcagggtcttacaaatgctttcctcaccccacctgaaaaactactggaccct
cttacttctcttgcaaatccatcaacaagaaatgaatctggacgagaacttgccttggca
gtagtagaacttttggatgccttatggagtgagaaatacactacagccacagtatacctc
caagataaagaagatttctggaaggctttgattcatcccatcaccactggtaagccaggt
gaagttagtgacgctgtagtgggtcactccctcaaagtcgttgctcgacaagtgttctcc
agtaatactaaaccctcggcttcactcagatcagccatggatcagctgtgtaatcctgat
acaggtgccatctgtcagtggtctaagcacattgtaatgagccttgaaagtggatccagc
tccaacaaagatgtgagtgagttattgttaccagcatggcgtgacttcgtggtggtgcta
gtggcccgagccaagtcttggctgagcagtgaccagaaggtgaacctggcaagtgatata
cttcatgccttgctgcaccagcttgaactggatacagtagatgaaacattaaccatccta
ttggctgaactatacttgtctctggttaaacattgtggaaagcagttagcagagaaggca
gacatatatatcagaatagggaagctgttagtgatggtgcaagaggctgttatgtctaca
ccaactcactgtcaactcttgatcttgggtgctgcactaaggatggttactctcactgag
gtctctcaccagtcacaaggtcaagttttgtcattactgagcccagtggtgggtcttata
cagcagcacggtaggctggctggctcagagggtcacagttgtacctctgcatccaccctg
ggtgttgctacatccctcctacatcagtgtctcttgcgctgtcctgttgacaccgcccag
ctgcacctcactcactcaaatgtcatacctgcacttctaaatgccaccgagatctacatg
aagattggtgaagaagaagtagttggggagttgctacgccttctggccacactgtctcgc
atctctcaactgtccgaggaattttgctctcagtcaatatcatcaacacttgtcatacca
ccatcaaaaactgatctgcttagtgaagttgtttggggtgttgtatggggtgtgcaccat
gagggtgtaggaggtgtggaaggcagtgtgaatgtggctgctgtccacctgtcagcactg
tgtgggtccctggcagctcctcatcgacagccgggtcttgccctagcaacagctgccctc
gtaacagcacttgctcctcatgcctcgctgtggattgttctgcacccagcatcacactct
cagctgacagcggccactacacgatgtatcaacttaactacacacttgctctgcacgccc
agggtagtacagatggagctgagtggtgagaggaccagtagtagcgttacatctgattct
tctgctacaacaacaactatttctcccaacacaactgctgtcctcgaccaaatgttgaaa
gtactgtgcgcatgtcttggtgccatccggtctttaggtcctgatttaactgaccttttg
tgtgggccgggcatagatgtggcagcttggacccttttcttccatccatctttccgtcca
gtgtctgctcatgacccaagtgctcagcctagtttggcttctctgacatctgttcttgat
ctctatgatagtcatgcatccaaggaaagtcgtggagtatcaccatgtcgtggcggtgcg
ccagaagttggcttaagtgtgagagtattagccacttctgcagaacaagccttgttgctg
cttctaacacagtctaccttggcactaatgagtgctgaaacttctccacgtgatgctcta
cgtgttcgccatggactggctgatgagatgaattcattcttcatgagatggttgggtcga
cgaccagcagtttcacctctaccatcaaccagcacagctgtgcctggagtcagcagttcg
gttcatattgatttaacatacttacgccttgcccagcaacttgtaggaagattgtgtgcc
actaaatga

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