Homarus americanus (American lobster): 121863301
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Entry
121863301 CDS
T07477
Name
(RefSeq) protein polybromo-1-like isoform X1
KO
K11757
protein polybromo-1
Organism
hame
Homarus americanus (American lobster)
Pathway
hame03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121863301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hame03021
]
121863301
03036 Chromosome and associated proteins [BR:
hame03036
]
121863301
Transcription machinery [BR:
hame03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121863301
Chromosome and associated proteins [BR:
hame03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
121863301
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
CHDNT
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
121863301
NCBI-ProteinID:
XP_042217826
LinkDB
All DBs
Position
Unknown
AA seq
1708 aa
AA seq
DB search
MSSQPGNKVGMPKRKRQEGDEGGGVMSTPVVEGRPKRRRNDTTLVSDYVDTIQYIFDALR
NKKKDDDTYLCEAFLRVPRKKTEPQYYDMIKIPIDMLKIQQKIKTDVYNELEEFCKDVQL
LVDNAKLYYAKSTEEYKDACELWAIFMVAKDRAPEEINKEKIRQQQLEEEERHGKRRGRP
PKTALAMSAPMILEEDGVPMTMEDAVEELFGAVMTAMDPEGRLYSYDFRFLPSRAKYPDY
YQLIDHPIDLKTIAQRIVAKQYKNVDDVEDDFVLLFNNACAFNEPGSRIFKDARTLKKLA
QLRKGDLLQILNAKKSVRLRSKRSVNNKQWSVLMAELEEGMELPLPEEDSGGTEMPLGTT
HDDEESDEDVDPDNPQWQLFLAAKNLSAPNDVNGYHQQKLISFIVDSNYQLVEPFKRLPN
RRWHADYYIEIKNPISMSQIRKKIVKGEYRFISEMLDDFNLMFDNAQQYNRPDSRIYRDA
VKLQKYIQNKAEEIMSIDEEDSDSYSDDDDSQSHSRRRLGRPPRPLTFKRRAKILFKTLM
DYMTDDGRQPIVAFIEKPAKRDYPDYYEVITQPIDMETIEGKIKGDRYSSEEELIGDFKL
MFHNCQKYNEEGSVIYTDATILEKVLNEKIKELNQGDGSVVKGKVFKRTKFNSYVCNSKT
IKLLYNAVREYRDAEGRQLSEVFLKLPSKALYPDYYEVIKLPIDLERILHKWKNGMYITL
DDIMGDLTLMFQNACRYNEPDSQIYRDALSLQRHALEKRLELSSSEAVPNVSALVQELFM
SLFISVFNHEEEDGRYTAESFFELPDYEEVDGKKSRVLSFDIMKRRLDKNMYSRLDHFQE
DLFSIFERARRCSKVDSRVFLDSITLQTEYMRLRDELCNNGAILQSKALSYTEVELNNQL
ELMRNRRGLEQEGEDEDSKPPPQPTDGTNNSSLSHNEVQYFVGDFVYLSPPEKNCDYPIL
HIERLWTNSEGRQMVYGCNYYRPAETFHQPNRKFFEQEVFKTDQHHAYPLTEVIGKCYVL
PLVDYIKMKPEGVDEKDLFVCESRYNSRNRFFKKIKSFPFNVGERVKLLERPEPLEMKRV
DSVFKERIERHKEELAELDEETKVIRRQLPNVVKSQAEGVPGGHTYYEQYNISSGAVKLG
DYVHVKGRDSGKKSVRQICQLWVTPEGTAYFLGTVFKNAAQNNPTGEHLFYKQEVYLTAG
VETLPISDITGRCIVFDVKEYCTLRSTEIRETEVYICDSFLDEMIQRVSSLMTGLRKFKH
SNYVTQDEIYYFRKPLILQKFDPSISFLKKQPQTYESSPMTPRMDMDYEDSMDGPPPSVA
SVDSGIIAGTPKSVKKPPTGKQFQQMTGKKQMTGYILFAAEIRKSITLKNPSANFGEISR
LVGIEWKRLTETDRKTHEDRAHQMNLESAERALSGNGPDSPQTPQSTPHQVTTPDLPLPN
NPDVVFECMWESCDYMFEDLLDLSDHLILEATGHVHKVTQVFECGWRGCSRHKKSSLAPF
PMVQRLVRHVREVHIQKNTGRIIQHHDRSRNFVASSRRSLLTVQQPTPGGTPASGLYPTT
GSPHSTIHGLLQGRGSPYLAGMVVSPHSGLIPSSQMGNLSYSIGTGVNGSPVPPRTFDPV
FVAPPPKTQRLLHSEAYIKYIENLDKPFLSNWERHLMATQENTVINDSGRLPAQWLANGP
GSHGTVVNALWALREYMMKDSLGIAKIL
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcccagccaggaaacaaggtgggcatgcccaagcgcaagagacaagaaggagat
gaggggggaggtgtaatgtctactcctgttgtggagggacgaccaaaaaggcggagaaat
gacacaactcttgtgagtgattatgtcgacaccatacaatatatatttgatgcattgagg
aacaagaagaaggatgatgacacctacctgtgtgaagcattcctacgtgtgccacgaaag
aaaacagaacctcagtactatgacatgattaaaataccaattgatatgctcaaaatccag
cagaagattaaaacagatgtttataatgagttggaggaattctgcaaagatgtgcagttg
ttggtggacaatgcaaagctttactatgccaagtcaacagaggagtacaaagatgcctgt
gagttgtgggccatcttcatggtggccaaggaccgagcaccagaggagatcaataaggaa
aaaattaggcaacagcaactggaggaggaggaacgccatggcaagaggcgtggacgacca
cccaagacagcattggcaatgtcagcacctatgatcttagaagaggatggtgtacctatg
acaatggaagatgctgtagaagaactctttggggctgtcatgactgccatggaccctgaa
ggtcgtctttattcttatgacttccggtttctaccctcaagggctaaatacccagattac
taccagctgattgaccacccaattgacctaaaaaccatcgcacaacgcattgtagcaaaa
caatacaaaaatgttgatgatgttgaggatgattttgttcttctgttcaacaatgcatgt
gccttcaacgagcctggctcccgcattttcaaggatgctcgtacccttaagaaactggcc
cagctacgtaaaggtgacctgcttcagattctcaatgctaagaagagtgttcgactcaga
agtaaaagaagtgtcaacaacaagcagtggtcagtgttgatggcagagctggaggaaggg
atggagttgccactgcctgaggaggacagcggggggacggagatgcccctcggaactaca
catgatgatgaggaaagtgatgaggatgtggacccggacaaccctcagtggcagctcttc
ctagctgccaagaatctctcagctcccaatgatgtaaatggatatcaccaacaaaaatta
atatcttttattgtagattccaattaccaacttgtcgagcctttcaaacgcctccccaat
agacgatggcatgctgattactacatagaaatcaagaaccccatctctatgtcacagatc
aggaagaaaattgtgaaaggggagtaccgctttatatcagaaatgctagatgacttcaac
ctgatgtttgacaatgcacaacagtacaaccggccagactccaggatatatcgtgatgct
gtgaaactccagaagtacatacagaacaaagcagaagagattatgtcaattgatgaagag
gactcagacagctacagcgatgatgatgactcccagtctcacagcagacgtcgtctgggc
cgtcctcccagaccactgacatttaaacgtcgagcaaagatcctgtttaagaccctgatg
gattacatgacagacgatggacgccagcctattgttgcctttattgaaaaaccagccaag
agggattacccagactattatgaggtgattactcagcctatagatatggagaccatcgaa
ggcaagatcaagggggacagatactccagtgaggaggagctcattggagacttcaagctt
atgttccacaactgccaaaagtacaatgaagaaggatctgtcatatacactgatgctaca
attttggagaaagtactaaatgagaagatcaaggagctaaaccaaggagatggcagtgta
gttaaggggaaggtttttaagcgcactaaatttaactcttacgtatgcaactccaaaacc
attaaacttctctacaatgctgtacgtgaataccgggacgccgaagggcgacaattatca
gaagtcttccttaagctgccgtccaaggctctctatcctgattattatgaggtaataaaa
ctgccaattgatcttgaacgaattctgcacaagtggaaaaatggaatgtatataaccctt
gatgacatcatgggggatttgacgctcatgttccagaatgcttgccggtacaatgaaccc
gactcccagatctaccgagatgctctctctttgcaacgccatgccttggagaaacgattg
gagttgagtagctctgaagctgttcccaatgttagtgctctggttcaggagttgttcatg
tcacttttcatcagtgtgttcaaccatgaggaagaagatggtcgatatacagcagaatca
ttctttgagttacctgactatgaagaggttgatggtaaaaaatcaagagtactgtctttc
gacataatgaagaggcgcctcgacaaaaatatgtactcccgccttgatcacttccaagag
gacctgttttccatatttgaacgagctcggaggtgttccaaagtggactcccgagtattt
ttggattccataacgcttcagacagaatatatgagattaagagatgaattgtgcaataat
ggagcgattcttcaatcaaaagccttgtcctacaccgaggtggagttgaacaaccaactg
gaacttatgcggaaccgtcgagggttagaacaggaaggagaggatgaggattctaagcct
ccaccacagcccactgatggaacaaacaacagcagcttaagccacaatgaagttcagtac
tttgtaggagattttgtatacctgtctcccccagaaaagaactgtgactaccccatccta
cacatagagcggttgtggactaacagtgagggccgacaaatggtgtatggctgtaattac
tatagaccagcagaaacttttcatcaacccaaccgcaaattctttgaacaggaggtgttt
aaaacagaccaacatcatgcatacccacttactgaggtaataggaaagtgctatgtactg
ccattagttgactacatcaagatgaaaccagaaggtgtggacgaaaaggacttgtttgtg
tgtgagtctcgctacaacagtcgaaacagattcttcaaaaagatcaagtcctttccattc
aatgtgggagaacgcgtcaagttactggaaagaccagaacctctggagatgaagcgtgtg
gactcggtgttcaaggagaggatagaacgtcataaggaagagctggcagagctagatgag
gagaccaaggttatccgtcgccaattaccgaatgtagtgaaatcccaggcagaaggagtg
ccaggtggtcacacgtactatgaacagtacaatatttcctcgggtgctgtcaagcttgga
gactacgtgcatgtcaagggacgagattcaggcaagaagtcggtcagacaaatctgtcaa
ttatgggtcacacctgaggggacagcttacttcctgggtacagtgttcaaaaatgcagca
caaaacaacccaactggtgagcacctcttctacaagcaggaagtttacctcactgccgga
gtggagaccttacccatctcagacatcactggccgctgtattgtcttcgatgtcaaagaa
tactgcacactacgatcgacagagatacgtgaaactgaagtgtatatatgcgacagtttc
ctagatgaaatgattcaaagagttagctcattgatgactggcctgcgcaagtttaaacac
tcaaactatgtcacacaagatgagatctactacttccggaagcctcttattctccaaaag
tttgatccttcaatatccttcctgaagaagcagccacagacctatgaatcatcacccatg
acaccacgcatggacatggattatgaagactccatggatgggcccccaccttctgtagcc
tcagtggactctgggatcattgctggaacccctaagtctgtcaagaaacctcctactggg
aaacaatttcagcaaatgacaggcaaaaaacaaatgacaggatatattctgtttgctgca
gaaattcgaaaaagcataacactgaaaaaccccagtgctaattttggggaaatatctcgc
ctcgtggggattgagtggaaacgcctcacggagactgatcgcaagactcatgaggaccga
gcccatcagatgaatcttgagagtgctgagcgagccttaagtggcaatggcccagattct
ccacagacaccacagagtactcctcaccaggtaacaacaccagatctacctctgcctaac
aaccctgatgtggtgtttgagtgcatgtgggagagttgtgactacatgttcgaggacctc
cttgacctcagtgatcacctgatactagaagccacaggtcatgtccacaaggttacacaa
gtgtttgagtgtggctggcgcggttgttcacgacacaagaagagttctcttgcacccttc
ccaatggtgcagcggctggtgagacatgtgcgggaagttcacatacagaagaacactggc
cgcatcatacagcaccatgaccgctctagaaactttgtggcatcgtctcgtcggtcactg
ttaactgtgcagcagccaaccccaggaggaactccagcctctgggttgtaccctaccact
ggttctccccattccacaatccatggactacttcaaggtcgtggaagtccctaccttgca
gggatggtggtgtcccctcactctgggcttatacccagcagtcagatgggcaatctatcc
tattctataggtaccggtgtgaatggcagtccagttcccccaaggacttttgacccagtt
tttgtagcacctccccccaagacacagagacttcttcattcagaagcctatatcaaatat
attgaaaatttggacaagcccttcctcagcaattgggagagacatttaatggccactcaa
gaaaatacagtcattaatgattctggtcgtcttcctgcgcagtggcttgccaatggacct
ggatctcatggtactgttgttaatgctctgtgggctctcagggagtatatgatgaaggat
tccctgggcattgctaaaattttgtga
DBGET
integrated database retrieval system
